Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0534 ATGATCTCTTCTTTCACTCAATCTGCAAAACCCATTAATGGGTCCGACGTGGTTCTCCGGCGGAGTGGTCCGGCGTTAATCCGGCGGTTTTCATGTCCACCTCCATTGCCGGAGCAAAAACCTCAAGGCTCCGTCGTGTGTATGAAAAATGCTCTCCATATCTCATCGGTTTCCAATTTTGGGCCGCTGGGAACTAGGAAGAGTGATTTGATCACGTGCAAGGCCTACGAGGCTGACCGATCGCAGCCGATTGAGTCGAACATTGAAATAACGGTGGCCGAAACGCCGTCCGAGGCGGCCAAGAAGGTGAAGATCGGACTGTATTTTGCTCTCTGGTGGAGTTTGAACGTCGTGTTCAACATTTACAACAAGAAGGTTTTGAACGCGTATCCATATCCATGGCTAACCTCCACACTTTCTCTTGCTGTTGGCTCTCTCATCATGTTAGTCTCTTGGATGACGAGGATCGCCGAGGCTCCCAAGACCGATTTCGAGTTCTGGAAATCCTTGTTCCCTGTTGCTGTGGCCCATACAATTGGCCATGTAGCGGCAACAGTGAGCATGTCAAAGGTTGCTGTCTCATTCACTCATATCATCAAGAGTGGGGAGCCTGCATTCAGCGTATTGGTTTCGAGGTTCCTGTTGGGTGAGACTTTTCCTGTTCCAGTTTACCTCTCTCTTCTCCCGATCATTGGTGGTTGTGCGCTTGCTGCCGTGACTGAGCTCAACTTCAATATGATAGGTTTCATGGGAGCCATGATATCAAACTTGGCATTTGTCTTCAGAAACATATTTTCCAAGAAAGGCATGAAGGGGAAGTCTGTTAGTGGGATGAACTACTATGCCTGTTTGTCTATATTGTCCCTTTTGATTCTTACCCCATTCGCAATTGCTGTCGAAGGACCGCAAATGTGGGTTGCAGGATGGAAAACAGCTCTCTCTGAGATTGGACCTAATTTTTTTTGGTGGTTAGCAGCACAGAGTGTCTTCTATCATCTCTACAACCAAGTATCCTACATGTCGCTGGACGAAATTTCTCCCTTGACATTCAGCATTGGCAACACCATGAAACGTATATCGGTCATAGTTTCTGCAATAATCATCTTCCGCACGCCTATACAACCCGTCAACACTCTCGGAGCTGCAATCGCCGTTCTTGGAACCTTCTTATATTCACAGGCAAAACAATGA 1191 47.36 MISSFTQSAKPINGSDVVLRRSGPALIRRFSCPPPLPEQKPQGSVVCMKNALHISSVSNFGPLGTRKSDLITCKAYEADRSQPIESNIEITVAETPSEAAKKVKIGLYFALWWSLNVVFNIYNKKVLNAYPYPWLTSTLSLAVGSLIMLVSWMTRIAEAPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQMWVAGWKTALSEIGPNFFWWLAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSAIIIFRTPIQPVNTLGAAIAVLGTFLYSQAKQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6427648 6431116 - CePI673135_10g005340.1 Cec10g0534 213449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0534 396 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
Cec10g0534 396 PANTHER SOLUTE CARRIER FAMILY 35 99 395 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Cec10g0534 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 239 - -
Cec10g0534 396 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 395 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0915 Cec-Chr2:11901141 Cec10g0534 Cec-Chr10:6427648 8.40E-61 dispersed
Cec05g2595 Cec-Chr5:36826736 Cec10g0534 Cec-Chr10:6427648 2.60E-62 dispersed
Cec09g2027 Cec-Chr9:37301289 Cec10g0534 Cec-Chr10:6427648 9.50E-59 dispersed
Cec05g0285 Cec-Chr5:2358662 Cec10g0534 Cec-Chr10:6427648 1.10E-86 transposed
Cec10g0534 Cec-Chr10:6427648 Cec04g1920 Cec-Chr4:37587002 1.00E-153 wgd
Cec10g0534 Cec-Chr10:6427648 Cec05g1631 Cec-Chr5:26008810 1.20E-183 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0534 K15283 - csv:101216838 729.939