Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0538 ATGGCGCTAAAACCAGAGGCAGAAAATAAACCTGACTCTGTCTTCTTCTTCTTCCTCCTCCTCTCTTTTATAACAATCTTCCCCTTTTCTCATTTCCGGTTTTCCCAAAAGCCCCACCCATTCCCCCCACCCCTTCCTCCGCCGCGTCCTCGCGCGGCGCCGCTTCCTTCACCTTCCTTCTTCAACTTTCCAAACCCACAATCCAACAAACAAACAAACAAACAAACCCATTTCACTCTCTTCTATTCTCCTAAAAAGCTAAACATATCTCAATACCCATTTTTAATTTCTCTCTGTTTTTCATATCCTTATCCTTCCGGCATGCAATTTCCAACGCGAGTTTTGATCTCTGTTTCTTTCCTTATTTCCCTTCTTGTTTTTTCTAATTTTTCTTTCTGTTCTGCACAAGACTATATAATTGGCGGCGGCGGCGGCGGCGGCGGCGACGACGACGACGAGGCGAAGCCAGCGGCGCCACCGCCGGAGCAGAATAACTGTAATGGGATATTCTTGTCCTATACATTTATTTCGCGTGAGAAGGAGCTGCCACGGCTGAAGAACGCGACGGCTCAGTCATGGGCATTCAAGTCGGAGGCGTTGATTCTGAATGCGGGATCGACGGAGCTGAAGGCGTGGAAGATGTTCATCGGATTTCACCACCGGGAAATCCTGGTGTCGGCGGCTGGCGCGGTGGTGATGGATGGGTCGGATTTCCCTGTGGACGTTGGGAATGGAACCACTTTGGCTGGGTACCCCATGACGGATCTGAAAACGTCGATTGAAACCGCGGGAGATATTAATCAGATTCAGGCGACGGTGGAGCTGACCGGAACGCAGTTCGGAATCAAGCCGCCTGGTGTTCCGATGCCAAAGACGATTCGCCTTGCTAACGATGGATTTAAGTGCCCTGCGCCTCGCCGTCGCGGGAAGAGAACAATGCATGTATGCTGCAAAAAGGATCCGAAGTTCAAGGTGAAAGCACCAAAGAAAACCAGATTTTTCCCTCGCCAAAATGGAGATCTCTCACTCACTTATGATATTATGCAAGCTTATGGAAATAACTATCTTGCTCAAGTCACAATCGACAACAACAATCCTCTAGGACGTCTTGATCACTGGAACTTAACTTGGGAATGGATGAGAGGAGAGTTCATTCAAAGCATGAGAGGAGCTTATACTCATACAAGAGATTTATCTCAATGCATTTATGGTCCTGCAGGCCAATACTATCAAGATTTTGACTTCTCTCAAGCCATGAGTTGCGATAAAAGGCCGGTCATTGCCGATCTTCCAGCCGATCGAAAAGACGACGATAAGGTTGGGAAGTTGCCGTATTGCTGTAGGAATGGAAGTTTGTTGCCAACATTGATGGATGAGAGCAAAGCAAGGTCTATTTTTCAATTACAAGTCTATAAGCTTCCCCCTGATATGAACCGAACAGCTCTTAATCCACCGCAGAAATGGAAGATCTCGGGCATTCTAAACCCGAAATACGTTTGTGCAGCTCCACTCCGAGTTGAACCGACGGAGTTTCCTGACCCTAGTGGACTTCAGGCAACGAGTACCGCGATTGCAAGTTGGCAAATTGTTTGCAACATTACAAGGCCAAAGGTGAAGCAATCAAAATGCTGTGTTTCATTTTCAGCATATTATAATGACTCTGTAATTCCTTGCAATACTTGTGCCTGTGGTTGTGACAACACTGATACTGATACTTGCAATCCAAATGCACATGCAATGCTGCTCCCTCCAGAAGCACTTTTGGTTCCATTTGTTAACAGGACAGCAAAAGCAAGAGCTTGGGCTAAAATTAAGCATTACCCAAATCCAAAGAAGATGCCTTGTCCTGATAACTGTGGAGTTAGCCTCAATTGGCATATTAACTCTGATTATACCAATGGATGGACTGCAAGATTAACACTTTTCAATTGGGAAGATTATCCATTTGAGGATTGGTTTACTGCTATTCAGTTGAACAAGGCCGGTCGCGGTTACGAAAACGTTTATTCTTTCAACGGAACCCGGCTTCCCAACATAAAAAACACCATCTTCCTCCAAGGTTTGCCTGGTTTAACATACTTGATGGGAGAGGTAAATGGGACCAATCCTAGATCTGATCCAAGAGTTCCAGGGAAGCAACAATCTGTCATTTCTTTCACCAAGAAAGGCCTGCGCGACATCGACATACTAGGAGGCAACGGTTTTCCAATCAAAGTGTTTTTCAATGGCGAAGAATGTGCGCTTCCAAAGGAAATTCCCACAGCAAGTTCAGGCCACCACTCTCGCCACGGTTTCATGCTACTCATCTTCATCTTAGCTCTTACTTTTGCGTTTATAACCGATCGCTTCCATTGA 2355 46.03 MALKPEAENKPDSVFFFFLLLSFITIFPFSHFRFSQKPHPFPPPLPPPRPRAAPLPSPSFFNFPNPQSNKQTNKQTHFTLFYSPKKLNISQYPFLISLCFSYPYPSGMQFPTRVLISVSFLISLLVFSNFSFCSAQDYIIGGGGGGGGDDDDEAKPAAPPPEQNNCNGIFLSYTFISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIRLANDGFKCPAPRRRGKRTMHVCCKKDPKFKVKAPKKTRFFPRQNGDLSLTYDIMQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFIQSMRGAYTHTRDLSQCIYGPAGQYYQDFDFSQAMSCDKRPVIADLPADRKDDDKVGKLPYCCRNGSLLPTLMDESKARSIFQLQVYKLPPDMNRTALNPPQKWKISGILNPKYVCAAPLRVEPTEFPDPSGLQATSTAIASWQIVCNITRPKVKQSKCCVSFSAYYNDSVIPCNTCACGCDNTDTDTCNPNAHAMLLPPEALLVPFVNRTAKARAWAKIKHYPNPKKMPCPDNCGVSLNWHINSDYTNGWTARLTLFNWEDYPFEDWFTAIQLNKAGRGYENVYSFNGTRLPNIKNTIFLQGLPGLTYLMGEVNGTNPRSDPRVPGKQQSVISFTKKGLRDIDILGGNGFPIKVFFNGEECALPKEIPTASSGHHSRHGFMLLIFILALTFAFITDRFH 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6523575 6527589 - CePI673135_10g005380.1 Cec10g0538 213453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0538 784 PANTHER COBRA-LIKE PROTEIN 7 118 779 - -
Cec10g0538 784 Pfam COBRA-like protein 355 534 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cec10g0538 784 MobiDBLite consensus disorder prediction 144 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1711 Cec-Chr7:32656333 Cec10g0538 Cec-Chr10:6523575 1.70E-27 dispersed
Cec05g0753 Cec-Chr5:6214228 Cec10g0538 Cec-Chr10:6523575 1.50E-215 transposed
Cec05g1640 Cec-Chr5:26338004 Cec10g0538 Cec-Chr10:6523575 2.40E-28 transposed
Cec10g0538 Cec-Chr10:6523575 Cec05g1639 Cec-Chr5:26333362 9.30E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0538 - - - 0.0