Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0582 ATGGCGGAGGAGTTTCAGAGCACTGGAAACTGGTGGGAGGCTTCTAGAAATCGCTACGAAGCCGGAATATCCCCTTCCTCCTCCTCCATCACCACCTTCGTCGACCACTCCGACTCCGCCGCCGCCGCCGCCGCCGCCGCCTCCGATCCCAATTTGCACATCATGGGCTTAGGCCTCGATTGGAATCAACCCCTCTTTAGGGGCGGCGGAGAGAAGGCGGCGGAGGGAAGTTTCCGATCGATGCTACAGCCGGAAAATATGAATTTAAATATGCAAGAAACAGGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGATTCAGTGGATGAGATCGGAGAAGCTATATTCAGGGGAGTCTCCGGCGACCGAATTTAAGGCAATAAACAGAGGATTTTCATTAGATCATCATCAAGCTCAACCCCAGTTCAGTAGCCCTTCTCACTACAGCTCCGGTGACAGTACCGTCACCAGTTTTCCGATCGACACCGCCGCCAATTTATACGGAAATTCCGCAACATTATTACAAGGCTTATTAGCCAGCGGCGGGGAGCAGCAGCAGCAACAGCAACAACAACAACAAGTCTCAGCGGCTGTAGGTGTGAACTACCCTTACAATTCCCATTTCGGAATGAACTCCAGCGAGTTAATGGCGGGAGGAGCGTCGTGGTCGCCGTCTAAAGTGCCTCAGTTTTTAAGAAACTCACCGCCAAAAGGGGCGGCGGCGGCAACTCCACATAGTCAGTTACAATTTTCGAACAACACGGCGTTCTGGAACGCGTCGGATATGAAAGACGTGAGACCCAGTTATTTTCCGGCGTCGTACAACACCGCTGCAGGTTTCGCCGATAAATCAAAGAATATATCGGAGGTTGGTGATTCGGTAACAACAGTAGGAAAAAAAAGTGGAAATGATCACAATCAGCAATCCGCCGCTGCTAAAAGGCCTCGAAATGAAACTCCTTCGCCATTGCCAGCTTTTAAGGTGAGGAAAGAGAAGATGGGGGACAGAATCACTGCGCTCCAACAACTCGTTTCACCTTTCGGAAAGACTGATACAGCCTCAGTGCTGTCTGAAGCAATTGAATACATAAAGTTCCTCCATGAACAAGTCAGTGTTTTGAGCACTCCATATTTGAAGAGTGGAGCTGCAGTACAGCAACAACATCAGCAGCAGAGATGTGAGAAATCAAAGGAAGGAGAAGGAGGAAAGCAAGATCTAAGAAGCAGAGGGCTTTGTTTAGTTCCAGTTTCAAGTACATTTCCAGTCACTCACGAAACCACAGTTGATTTTTGGACTCCAACCTTCGGAGGAACCTTCAGATAA 1326 49.7 MAEEFQSTGNWWEASRNRYEAGISPSSSSITTFVDHSDSAAAAAAAASDPNLHIMGLGLDWNQPLFRGGGEKAAEGSFRSMLQPENMNLNMQETGQQQQQQQQQQQIQWMRSEKLYSGESPATEFKAINRGFSLDHHQAQPQFSSPSHYSSGDSTVTSFPIDTAANLYGNSATLLQGLLASGGEQQQQQQQQQQVSAAVGVNYPYNSHFGMNSSELMAGGASWSPSKVPQFLRNSPPKGAAAATPHSQLQFSNNTAFWNASDMKDVRPSYFPASYNTAAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSGAAVQQQHQQQRCEKSKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7364162 7368249 - CePI673135_10g005820.1 Cec10g0582 213497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0582 441 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 328 382 IPR036638 GO:0046983(InterPro)
Cec10g0582 441 Gene3D - 328 398 IPR036638 GO:0046983(InterPro)
Cec10g0582 441 MobiDBLite consensus disorder prediction 295 316 - -
Cec10g0582 441 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 318 367 IPR011598 GO:0046983(InterPro)
Cec10g0582 441 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 105 420 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Cec10g0582 441 FunFam Transcription factor bHLH123 family 328 392 - -
Cec10g0582 441 CDD bHLH_AtbHLH_like 324 375 IPR045239 -
Cec10g0582 441 MobiDBLite consensus disorder prediction 295 324 - -
Cec10g0582 441 SMART finulus 329 373 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0700 Cec-Chr2:7355477 Cec10g0582 Cec-Chr10:7364162 2.40E-26 dispersed
Cec03g0512 Cec-Chr3:5396995 Cec10g0582 Cec-Chr10:7364162 1.10E-37 dispersed
Cec05g2062 Cec-Chr5:32503238 Cec10g0582 Cec-Chr10:7364162 6.30E-27 dispersed
Cec07g1433 Cec-Chr7:29912535 Cec10g0582 Cec-Chr10:7364162 3.30E-23 dispersed
Cec07g1640 Cec-Chr7:31979254 Cec10g0582 Cec-Chr10:7364162 3.80E-25 dispersed
Cec09g0194 Cec-Chr9:1698258 Cec10g0582 Cec-Chr10:7364162 2.30E-20 dispersed
Cec10g0582 Cec-Chr10:7364162 Cec11g0085 Cec-Chr11:1090893 1.60E-27 dispersed
Cec10g0582 Cec-Chr10:7364162 Cec04g1946 Cec-Chr4:37775630 2.20E-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0582 - - - 0.0