Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0587 ATGTCCCCAATCAAACCTCCACCACTAAACCGACCGGAGTTTCGAACAATGGCCATTAGAACCGCTTTCGAAAAATCCGTCGAGGCTCAAAATTATGCAACCCGGTTTGGTCCGAGCTGTAAAACCACGCGCCAGAGAGCCGCGTGGACTGACTGTTTGAAGCTCTACAACGACGTCGTTCTCCAATTAAACCGTACCCTCCAATGCGTTCTTAGCGACGGGACAATCCAACGCCGCCATTGTACGGATTTCGATGCGCAAACGTGGCTTAGCTCTGCTCTTACTGACATCGATTTGTGCCTCTCCGGCGCGGCGGATCTCAATGTGACGGATTTTATAGCTCCGATCAAATGCCAGAATGTTTCCAAGATGATTAGTAATTGCTTGGCCATTAATGGGGTATTTTTAAAAGAAGGGGTTAAAAGTGTAAATAGAATCGGAGAGGAGTTTGATCAAAATGGGTCGTTTCCGATGTGGGTTTCGGATGGTGATCGGAAATTGTTGCAGTCGTCCGCTAAGGTGAGGGCTAATTTGGTGGTGGCGAAAGATGGGTCTGGGAAATTTCGGACGGTTCAGGCGGCGATCGATGCGGCGGCGAAGAGGCGTGGGAGGGGGCGATTTGTAGTTTATGTAAAACGAGGGGTTTATAGAGAAAATATTGAAGTTGGGAATGATAATGGGAATTTAATGTTGGTGGGAGACGGGATGAGATTTACTGTGATTACAAGTGGAAGAAGCGTCGCCGCCGGCTTCACCACCTTCAGTTCTGCAACCGCTGGTATTCAAGGTCCAGGCTTCATCGCTCGAGACATAAGGTTCGTAAACACAGCCGGTCCACGAATGGGCCAAGCAGTTGCACTACGATCATCCTCGGACCTATCTGTGTTCCATCGATGCAGCTTCGAGGGCTACCAAGACACTCTAATGGTACTCTCACAAAGACAATTCTACAAACAATGTTACATTTACGGTACAATTGACTTCATCTTTGGGAACGCAGCAGTAGTTTTACAAAATTGCATGATTTACGTAAGGAGGCCTTTAAAGGGCCAAGTCAATGTCATAACTGCCCAAGGCCGAGAGGACCCGTTTCAGAACAGCGGAATCTCCATCCACAACTCTCAAATACGAGCCGCTGCTGATTTGCGGCCCATGATTGGCTCGGTCAAGACGTACATGGGTCGGCCCTGGAAGAAGTATTCGCGGACAGTCATTATGAGAAGCTACATTGATAGCTTGGTCAGCCCAGCCGGGTGGTTGGCGTGGCAAAAAAGTAAATTTGCTCAAGCTACGTTGTATTATGGGGAGTATCGTAATATTGGGCCTAGGGCTTCCACACGGTTTAGAGTCAAATGGCCGGGTTTTCATGTTATTAGAAGCCCAAATGTGGCTTCTAAGTTCACTGTCCAGAGACTCATCGCCGGCCAAACTTGGCTTCCGGCCACCGGAGTTCCCTTCAAGCTTGGCCTATGA 1473 48.74 MSPIKPPPLNRPEFRTMAIRTAFEKSVEAQNYATRFGPSCKTTRQRAAWTDCLKLYNDVVLQLNRTLQCVLSDGTIQRRHCTDFDAQTWLSSALTDIDLCLSGAADLNVTDFIAPIKCQNVSKMISNCLAINGVFLKEGVKSVNRIGEEFDQNGSFPMWVSDGDRKLLQSSAKVRANLVVAKDGSGKFRTVQAAIDAAAKRRGRGRFVVYVKRGVYRENIEVGNDNGNLMLVGDGMRFTVITSGRSVAAGFTTFSSATAGIQGPGFIARDIRFVNTAGPRMGQAVALRSSSDLSVFHRCSFEGYQDTLMVLSQRQFYKQCYIYGTIDFIFGNAAVVLQNCMIYVRRPLKGQVNVITAQGREDPFQNSGISIHNSQIRAAADLRPMIGSVKTYMGRPWKKYSRTVIMRSYIDSLVSPAGWLAWQKSKFAQATLYYGEYRNIGPRASTRFRVKWPGFHVIRSPNVASKFTVQRLIAGQTWLPATGVPFKLGL 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7643750 7646571 + CePI673135_10g005870.1 Cec10g0587 213502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0587 490 SMART PMEI_2 2 131 IPR006501 GO:0004857(InterPro)
Cec10g0587 490 ProSitePatterns Pectinesterase signature 2. 322 331 IPR033131 -
Cec10g0587 490 PANTHER PECTINESTERASE 22 481 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cec10g0587 490 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 134 IPR035513 -
Cec10g0587 490 Pfam Pectinesterase 177 475 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec10g0587 490 CDD PMEI-like_3 7 137 - -
Cec10g0587 490 ProSitePatterns Pectinesterase signature 1. 203 222 IPR018040 -
Cec10g0587 490 FunFam Pectinesterase 171 490 - -
Cec10g0587 490 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 8 135 IPR035513 -
Cec10g0587 490 Pfam Plant invertase/pectin methylesterase inhibitor 12 131 IPR006501 GO:0004857(InterPro)
Cec10g0587 490 NCBIfam pectinesterase inhibitor domain 10 133 IPR006501 GO:0004857(InterPro)
Cec10g0587 490 SUPERFAMILY Pectin lyase-like 174 489 IPR011050 -
Cec10g0587 490 Gene3D - 171 490 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0879 Cec-Chr5:7607139 Cec10g0587 Cec-Chr10:7643750 4.90E-155 dispersed
Cec10g0587 Cec-Chr10:7643750 Cec11g1504 Cec-Chr11:29244139 3.00E-91 dispersed
Cec10g0587 Cec-Chr10:7643750 Cec01g0644 Cec-Chr1:6986460 1.10E-114 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0587 K01051 - csv:101213944 864.759