Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0594 ATGGACTCTTTCTTCTCAACACTCGTTGCCTTTAACTTAGTCTTTCTTCTCTTCAGGTCTCTTGCTGTCTCCGATTCCTTAACGGCTCAAAACCCGTATCTCAGAGATGGCCTTACTCTGGTCTCTAGAAATGGAATCTTCGAATTGGGTTTCTTCAGTCCTGGACTTCCCGCCAATCGTTACTTGGGAATCTGGTTCAAGAATCGGCGAGGTCCGACCTCTGTTTGGGTTGCGAACAGGAAAACCCCCATTAATGATTCGTCTGGTGTACTGGTGATGAACATTACAACAGGAAATCTTACACTCTACAGCCATAATTCCACTGCCATTGTTTGGTCTGCCAAGTTACTGAGAAAAGTCCCCAACGGGGTACTCCAACTATTGGACACTGGAAATCTTGTGCTGAGGAATAGGGAAGATGAAGATCCGCGAAACTATTCCTGGCAAAGCTTTGATTACCCTACTGACACTCTCTTGCCTGGAATGAAGCTAGGTTGGGACTTGAGAAATAACATAGAAAGAAGATTAGAGGCTTGGAAGAATCTCAATGATCCATCTCCTGGAGACCTCAGTTGGAGGATGGAGCTTCATGAATATCCCGAGACTGTCATGTGGAATGGTTCCAAAAAGTACGTCAGGCATGGCCCATGGAATGGTGTGAGACTCAGTAGTAGACCACTAGCTGCAGCGCCAATTTTGAACTTCAACTTTGTTTCAAATGAGGATGAGGTTTACTACCAATACTCTGTTGTAAATAAGTCTCATTCAGTGATGTTGGTGATGAACCAATCCAATTATGTGCGCATATTGTACTTGTGGTCTGCAGCTGAAAGACGATGGAGAGTTTACACTTCATTACCAAGAGATAACTGTGACAATTATGCCCTGTGTGGCCCCTATGGATATTGTGATATAAGAGTCACCCCATCTTGTTTATGTCTAGAAGGGTTCAAGCCAAGATCACCTGATAGTTGGGAGGCCGGGGAATTTGCAGACGGTTGTGAACGAAACAAACTGATGAACTGTGGTGATGAAGTTGGGTTTGCACAGCTCAACCAGTTGAAATTGCCAGACACTAAGTATACTTGGGTCAACAAAAGCATGAATCTTGAGGAGTGCAAGCAAAAATGCTTGAGAAATTGTTCGTGTATGGCTTATGCAATGACAAATGTCAGTGGCAGTGGCAGTGGCAGTGGCTGTGCCTTGTGGATTGGTGATCTAATTGACTTGAAACTGATCCCGGACGCAGGACAGGATTTATATGTCAAAATGCTGGCATCAGAATTAGTCAAGCATGGGGAGGCACACAAAACTGAAAGATTGAATCCTAAGGTGAAGATTGCTTTGTTTGTGATTTCCGGTTTAGGTTTGGCTATCCTCTTCATAGGCATAGGCGTATACATTTTCAAGAAGCGATCAACCTTCAAAGATGAACAAGAGAAAATAGAAGCTCAAGACCTGGAGCTTCCCTTGTTTGATCTATCCTTGATTAATAGTGCCACACATAACTTCTCACATAATAATAAGCTAGGAGAAGGTGGCTTTGGGCCAGTATATAAGGGTAAGCTTACAAATGGACAAGATGTTGCAGTGAAGAGACTTTCACAGAGTTCTGGACAAGGAACGAAGGAGTTTAAGAATGAAGTGATCCTGATCGCAAAACTGCAACATCGAAACCTTGTAAAGCTTCTTGGTTGCTGCATTCAAGGAGATGAGAAAATGCTAGTTTATGAGTATATGCCAAACAAAAGTTTGGACTTCTTTATATTTGATCAAACACAACGTCAATTATTAAATTGGTCAAAACGGTACCGAATTATTTGTGGAGTTGCTAGAGGACTTATGTATCTTCATCAAGATTCTAGATTGAGGATTATACATAGAGATTTAAAAGCAAGTAATGTTTTACTAGATAGGGATATGAATCCAAAAATCTCTGATTTTGGACTGGCTAAAACTTGTGGTGGGGATCAAACTGGAGGAAGAACATTAAGAGTGGTCGGAACTTACGGATATATGGCACCAGAGTATGCTTTTGATGGACAATTCTCAGTGAAATCTGATGCTTTTAGTTATGGCATTTTGCTGCTAGAGATCATTAGTGGGAAAAGAAGCAGAACTTTCTGCCATTTGAATGACCAAAATCTAATAGCATATGCATGGCGATTGTGGAAAGAAGGAAATATAGAAGAATTGATCGACGATGCCATTCAAGAAACATGCAGCCTTTCGGAGGTACTGAGATGTATCAATATCAGTTTGTTGTGTGTTCAACAACATCCAAATGATCGACCCACAATGTCATTGGTGGTTATGATGTTAGGCTGTGAAATTCCTTTGTCGCAACCGAAACAACCCGGATTTTTCATAGAAAATGAAAAAGCCATTGCAATGAAAAAAGGCTCAAGTAAAGATAAATCAACTTCAACTAATGAATTGACTATTACGCTCCCAGATCCGAGGTAA 2466 41.32 MDSFFSTLVAFNLVFLLFRSLAVSDSLTAQNPYLRDGLTLVSRNGIFELGFFSPGLPANRYLGIWFKNRRGPTSVWVANRKTPINDSSGVLVMNITTGNLTLYSHNSTAIVWSAKLLRKVPNGVLQLLDTGNLVLRNREDEDPRNYSWQSFDYPTDTLLPGMKLGWDLRNNIERRLEAWKNLNDPSPGDLSWRMELHEYPETVMWNGSKKYVRHGPWNGVRLSSRPLAAAPILNFNFVSNEDEVYYQYSVVNKSHSVMLVMNQSNYVRILYLWSAAERRWRVYTSLPRDNCDNYALCGPYGYCDIRVTPSCLCLEGFKPRSPDSWEAGEFADGCERNKLMNCGDEVGFAQLNQLKLPDTKYTWVNKSMNLEECKQKCLRNCSCMAYAMTNVSGSGSGSGCALWIGDLIDLKLIPDAGQDLYVKMLASELVKHGEAHKTERLNPKVKIALFVISGLGLAILFIGIGVYIFKKRSTFKDEQEKIEAQDLELPLFDLSLINSATHNFSHNNKLGEGGFGPVYKGKLTNGQDVAVKRLSQSSGQGTKEFKNEVILIAKLQHRNLVKLLGCCIQGDEKMLVYEYMPNKSLDFFIFDQTQRQLLNWSKRYRIICGVARGLMYLHQDSRLRIIHRDLKASNVLLDRDMNPKISDFGLAKTCGGDQTGGRTLRVVGTYGYMAPEYAFDGQFSVKSDAFSYGILLLEIISGKRSRTFCHLNDQNLIAYAWRLWKEGNIEELIDDAIQETCSLSEVLRCINISLLCVQQHPNDRPTMSLVVMMLGCEIPLSQPKQPGFFIENEKAIAMKKGSSKDKSTSTNELTITLPDPR 821
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7873006 7876380 + CePI673135_10g005940.1 Cec10g0594 213509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0594 821 CDD PAN_AP_plant 340 423 - -
Cec10g0594 821 ProSiteProfiles Protein kinase domain profile. 504 788 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0594 821 Pfam PAN-like domain 343 410 IPR003609 -
Cec10g0594 821 CDD B_lectin 33 154 IPR001480 -
Cec10g0594 821 Pfam D-mannose binding lectin 73 180 IPR001480 -
Cec10g0594 821 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544(InterPro)
Cec10g0594 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 579 - -
Cec10g0594 821 SUPERFAMILY Protein kinase-like (PK-like) 489 774 IPR011009 -
Cec10g0594 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Cec10g0594 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 782 - -
Cec10g0594 821 SMART ntp_6 343 424 IPR003609 -
Cec10g0594 821 CDD STKc_IRAK 510 774 - -
Cec10g0594 821 SMART serkin_6 504 774 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0594 821 PIRSF SRK 1 821 IPR024171 GO:0004674(InterPro)
Cec10g0594 821 Gene3D - 20 151 IPR036426 -
Cec10g0594 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 788 - -
Cec10g0594 821 Gene3D Phosphorylase Kinase; domain 1 466 579 - -
Cec10g0594 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g0594 821 SMART blect_4 31 154 IPR001480 -
Cec10g0594 821 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Cec10g0594 821 Pfam Protein tyrosine and serine/threonine kinase 507 772 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g0594 821 Gene3D Transferase(Phosphotransferase) domain 1 580 781 - -
Cec10g0594 821 MobiDBLite consensus disorder prediction 802 821 - -
Cec10g0594 821 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Cec10g0594 821 MobiDBLite consensus disorder prediction 799 821 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0594 Cec-Chr10:7873006 Cec09g0213 Cec-Chr9:1845182 9.90E-119 dispersed
Cec10g0594 Cec-Chr10:7873006 Cec10g0596 Cec-Chr10:7888022 0.00E+00 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72304 PF07714 PK_Tyr_Ser-Thr 1.10E-49 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0594 - - - 0.0