Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0596 ATGGACTCTTTCTCTCCAGCATTGCTGGCCTTTAACTTTCTCCTTTATCTCTTCACCTATGTAGCTGCCACTGATTCCTTAACTGCTCAAAACCCATTTCTCAGAGATGGCTTTAGTCTGGTCTCCAAAAATGGAAATTTCGAATTGGGTTTCTTCAGTCCTGGTCTTTCGAGAGACCGTTACTTGGGAATTTGGTTCAAGAATCGGCGAGGTCCGACCTCTGTTTGGGTTGCGAATAGGAAAACGCCAATTAATGACTCATCTGGTGTACTGATGATGAACCTTACACCAGGAAATCTTACACTCTATAGCCATAATTCCACCGCCACCATTGTTTGGTCCGCCAGGTTGCTGAGAAAAGTCCCCAATGGGGTACTCCAATTATTGGACACTGGAAATCTTGTGCTGAGAGATAGGGAAGATGAAAATCCCCAAAACTACTCGTGGCAAAGTTTTGATTACCCTACTGACACTCTTTTGCCTGGAATGAAGCTGGGTTGGGACTTGAGAAATAACATAAATAGAAGATTAGATGCTTGGGAAAATCCCAATGACCCATCTCCTGGAAACCTCAGTTGGAGGATGGAGCTTCATGAATATCCTGAGTCTGTCATGTGGAAAGGTTCCCAAGAATACTTCAGGCATGGCCCATGGAATGGTGTGAGAGTCACTAGTAGACCACTGGGTATTGCACCAATTCTGAACTTTAACTTTGTTTCAAATGAAGATGAAGTTTACTACCAATACTCTGTTGTTAATAAGTCTCATACAGTGATGGTGGTGATGAACCAATCCAATTACCTGCGCATAATGTACTTATGGTCTGCAGCTGAGAGACAGTGGAGACTTTACACTTCATTGCCAAGAGATTTCTGTGACAATTATGCCCTGTGTGGCCCTTATGGGTATTGTGATATAAGGGTAACTCCATCTTGTAAATGTCTAGAAGGGTTTAAGCCAAGATCACCTGATAGTTGGACGGCAGGGGAATTTGCGGATGGTTGTGAACGAAACAAACTGATGAACTGTGGCGATGAAGTTGGGTTTGCACAGCTCAACCAGCTGAAATTGCCAGACACAAAGCATACTTGGGTAAACAAAAGCATGAATCTTGAAGAGTGCAGGCAAAAATGCTTGAGAAATTGCTCTTGTATGGCTTATGCAAATACAAATATCAGTGGGAGTGGCAGTGGCTGTGCCTTGTGGATTGGTGATCTAATTGACTTGAAATTGATCCCGGACGCAGGACAAGATTTATATGTCAAAATGCTTGTATCAGAATTAGTCAAGCGTAGGGAGGCACACAAAACTGAAAGATTGAATCCTAAGGTGAAGATATCTTTGGTTGTGATTGTTGCCAGTTTCAGTTTGGCTATCCTCTTCGTATGCTTATACATTTTCAAAAAGAGATCAACCGTCAAAGATGACCATGAGAAAATAGAAGCTCAAGATCTGGAGCTTCCCTTATTTGATCTATCCTTGATAAATAGTGCCACAAATAACTTCTCGATTGATAATAAGTTGGGAGAAGGTGGCTTTGGGCCAGTATATAAGGGTAAGCTTACAAATGGACAAGATGTTGCAGTGAAGAGACTTTCACGGAGTTCTGGACAGGGAATGAACGAGTTTAAGAATGAAGTAATCCTGATTGCAAAACTTCAACATCGAAATCTTGTAAAGCTTCTTGGTTGCTGCATTCAAGGAGAAGAGAAAATGTTAGTTTATGAGTACATGCCAAACAAAAGTTTGGACTTCTTTATATTTGATCGAACCCAACGTCAGTTATTAGACTGGTCACAACGATACCACATTATTTGTGGAATTGCTAGAGGACTCATGTATCTTCATCAAGATTCTCGATTGAGGATTATACATAGAGATTTAAAAGCTAGTAATGTGTTACTTGATATGGATATGAATCCGAAAATCTCTGATTTTGGTTTGGCTAAAACTTGCGGTGGAGATCAAACTGAAGGACGAACGATAAAAGTGGTCGGAACTTACGGATATATGGCACCTGAATATGCTTTTGATGGACGATTCTCAGTAAAATCTGATGCTTTTAGTTATGGCATTTTGTTGTTGGAGATCATTAGTGGAAAAAGAAGCAGAAGTTTCTGCCACTTGAATGACCAAAATCTCATTGCATATGCCTGGCGATTGTGGAAAGAAGGAAATCCAGAGGAATTGATTGACGACGCCATTCGAGAAACATGCATCATTTCGGAGGTATTGAGATGTATCAATATCAGTTTGTTGTGTGTCCAACAACATCCTAAAGATCGACCCACAATGTCATCGGTGGTTATGATGTTAGGCTGTGAAATTCCTTTGTTGCAACCAAAACAACCCGGATTTTTCGTAGAAAATGAAGCCATTGCAATGAAGAGTGGCTCAAGTAAAGACAAATCAACTTCAACTAATGAATTAACTATTACACTCCCAGATCCAAGGTAA 2457 40.7 MDSFSPALLAFNFLLYLFTYVAATDSLTAQNPFLRDGFSLVSKNGNFELGFFSPGLSRDRYLGIWFKNRRGPTSVWVANRKTPINDSSGVLMMNLTPGNLTLYSHNSTATIVWSARLLRKVPNGVLQLLDTGNLVLRDREDENPQNYSWQSFDYPTDTLLPGMKLGWDLRNNINRRLDAWENPNDPSPGNLSWRMELHEYPESVMWKGSQEYFRHGPWNGVRVTSRPLGIAPILNFNFVSNEDEVYYQYSVVNKSHTVMVVMNQSNYLRIMYLWSAAERQWRLYTSLPRDFCDNYALCGPYGYCDIRVTPSCKCLEGFKPRSPDSWTAGEFADGCERNKLMNCGDEVGFAQLNQLKLPDTKHTWVNKSMNLEECRQKCLRNCSCMAYANTNISGSGSGCALWIGDLIDLKLIPDAGQDLYVKMLVSELVKRREAHKTERLNPKVKISLVVIVASFSLAILFVCLYIFKKRSTVKDDHEKIEAQDLELPLFDLSLINSATNNFSIDNKLGEGGFGPVYKGKLTNGQDVAVKRLSRSSGQGMNEFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLVYEYMPNKSLDFFIFDRTQRQLLDWSQRYHIICGIARGLMYLHQDSRLRIIHRDLKASNVLLDMDMNPKISDFGLAKTCGGDQTEGRTIKVVGTYGYMAPEYAFDGRFSVKSDAFSYGILLLEIISGKRSRSFCHLNDQNLIAYAWRLWKEGNPEELIDDAIRETCIISEVLRCINISLLCVQQHPKDRPTMSSVVMMLGCEIPLLQPKQPGFFVENEAIAMKSGSSKDKSTSTNELTITLPDPR 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7888022 7891422 + CePI673135_10g005960.1 Cec10g0596 213511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0596 818 Pfam PAN-like domain 344 409 IPR003609 -
Cec10g0596 818 Pfam Protein tyrosine and serine/threonine kinase 503 771 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g0596 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 780 - -
Cec10g0596 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 186 IPR036426 -
Cec10g0596 818 CDD PAN_AP_plant 341 422 - -
Cec10g0596 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 786 - -
Cec10g0596 818 SMART serkin_6 502 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0596 818 PIRSF SRK 1 818 IPR024171 GO:0004674(InterPro)
Cec10g0596 818 SMART blect_4 31 155 IPR001480 -
Cec10g0596 818 Gene3D - 19 152 IPR036426 -
Cec10g0596 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Cec10g0596 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g0596 818 MobiDBLite consensus disorder prediction 798 818 - -
Cec10g0596 818 SMART ntp_6 344 423 IPR003609 -
Cec10g0596 818 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0596 818 CDD STKc_IRAK 508 772 - -
Cec10g0596 818 SUPERFAMILY Protein kinase-like (PK-like) 487 787 IPR011009 -
Cec10g0596 818 Gene3D Transferase(Phosphotransferase) domain 1 578 776 - -
Cec10g0596 818 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Cec10g0596 818 Pfam D-mannose binding lectin 73 180 IPR001480 -
Cec10g0596 818 CDD B_lectin 34 155 IPR001480 -
Cec10g0596 818 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Cec10g0596 818 Gene3D Phosphorylase Kinase; domain 1 465 577 - -
Cec10g0596 818 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1939 Cec-Chr4:37731780 Cec10g0596 Cec-Chr10:7888022 4.60E-99 dispersed
Cec05g1681 Cec-Chr5:27885745 Cec10g0596 Cec-Chr10:7888022 1.60E-270 dispersed
Cec07g0667 Cec-Chr7:10948538 Cec10g0596 Cec-Chr10:7888022 4.70E-80 dispersed
Cec09g0257 Cec-Chr9:2265806 Cec10g0596 Cec-Chr10:7888022 2.20E-96 dispersed
Cec10g0596 Cec-Chr10:7888022 Cec09g0213 Cec-Chr9:1845182 1.00E-123 dispersed
Cec10g0594 Cec-Chr10:7873006 Cec10g0596 Cec-Chr10:7888022 0.00E+00 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72305 PF07714 PK_Tyr_Ser-Thr 1.50E-49 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0596 - - - 0.0