Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0598 ATGCCAACAGTTTGGTTGTCATTGAAGAAATCTTTGCACTGTAAGTCAGAGCCATCAGAAGTTCATGACCCAAAAAGTAGGAAGAATTTAGGAGCTATTTTGACAAGAAAAACAGGGGGCGGAGGAGGAGGAAGATCAGGTTGTTCAAGGTCCATAGCAAATCTCAAAGATGTCATCCATGGCGGCAGCAAAAGGCATTTGGATAAGCCTCCAAGTTGCAGTCCAAGATCCATTGGCAGCAGTGAGTTTCTTAACCCAATAACCCACGAAGTCATTCTCAGCAACTCAAGATGTGAGCTCAAAATCACCGGTTTTCATGGTGGTTTCCCCCAAGATCTTCCTGCCGCCGATCCTCACGGCGGCGCTAACGGCGCTTCCACCTTTGTTGGTACTCTCACACCGGGCACGCCCGGCCCCGGTGGCCACCCTTCAATGCATTACTTCAATCCTTCCTTGAGGTCTTCGAAAAAACTCCCTTTCAGAGAGGGATTTGGTAGCTCTAATAAATCTGGCGGCGGAGGAGCCCGCAGCGGAGTACATTCGAGCAATAGAATCTCTTTGGAAACAGAGAATAGTAGGAATGGATCTTCTGCTGCGGTTACTTGCCATAAATGTGGAGAGCAGTTCAATAAATGGGATGCTGCTGAAGCACATCATCTTTCTAAACATGCTGTGACTGAGCTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATAATTTGCAGGACAAGCTGGTTAAAGTCAGAGAATCAAAGTGGCAGAATAGAAAGAGTCCTAAAAGTTCACAATATGCAACGCACGCTAGCTCGATTCGAGGAGTATCGCGAGACGGTTAAGATCAAAGCGAGCAAGCTTCCAAAGAAGCACCCTCGGTGCCTTGCAGACGGGAACGAGCTCCTGCGATTCTACGGGACGACAGTGGCATGCTCGCTGGGTGTTAACGGCTCCTCCAGCCTATGCATATCAGAGAAATGCTGCGTTTGTAGGATCATACGTAACGGGTTCTCGGCAAAGACAGAGATGAAAGAAGGGATAGGCGTATTCACAACTTCGACGAGTGCGAGAGCATTCAACTCGATCGAGGCAGCAGGAGGGGACGAGACGATGAGGAGGAAAGCGATGATAGTTTGTAGGGTGATTGCAGGGAGAGTTCATAGGCCATTGGAGAACATACAAGAAATGGCTGGGCAGACAGGGTTTGATTCATTGGCAGGGAAAGTTGGGTTGCATTCAAATATAGAAGAGCTTTATTTGCTGAATCCTAGAGCTTTGCTTCCATGTTTTGTGGTAATTTGCAAACCATGA 1308 47.63 MPTVWLSLKKSLHCKSEPSEVHDPKSRKNLGAILTRKTGGGGGGRSGCSRSIANLKDVIHGGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFHGGFPQDLPAADPHGGANGASTFVGTLTPGTPGPGGHPSMHYFNPSLRSSKKLPFREGFGSSNKSGGGGARSGVHSSNRISLETENSRNGSSAAVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQSGRIERVLKVHNMQRTLARFEEYRETVKIKASKLPKKHPRCLADGNELLRFYGTTVACSLGVNGSSSLCISEKCCVCRIIRNGFSAKTEMKEGIGVFTTSTSARAFNSIEAAGGDETMRRKAMIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLHSNIEELYLLNPRALLPCFVVICKP 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7905361 7906983 + CePI673135_10g005980.1 Cec10g0598 213513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0598 435 Gene3D - 225 434 - -
Cec10g0598 435 MobiDBLite consensus disorder prediction 160 182 - -
Cec10g0598 435 ProSitePatterns Zinc finger C2H2 type domain signature. 202 223 IPR013087 -
Cec10g0598 435 SUPERFAMILY ADP-ribosylation 225 434 - -
Cec10g0598 435 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 434 - -
Cec10g0598 435 FunFam C2H2-like zinc finger protein 224 434 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1659 Cec-Chr5:27332078 Cec10g0598 Cec-Chr10:7905361 2.80E-165 dispersed
Cec05g2017 Cec-Chr5:32110642 Cec10g0598 Cec-Chr10:7905361 2.10E-53 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30349 None None None None Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0598 - - - 0.0