Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0627 ATGGCCGCCACCGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGGAACTGGCAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCTTTCGCCAAGAACAGAGCTCTCGAGGTGATCCACGGGAGGTGGGCGATGTTGGGAGCATTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGTCTAGACTACCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAATGGCCTCGACGGTGTCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGCCGTCTTGCCATGTTTTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAA 801 55.56 MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8406037 8407721 + CePI673135_10g006270.1 Cec10g0627 213542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0627 266 FunFam Chlorophyll a-b binding protein, chloroplastic 55 259 - -
Cec10g0627 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 27 265 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cec10g0627 266 SUPERFAMILY Chlorophyll a-b binding protein 47 263 - -
Cec10g0627 266 Gene3D Chlorophyll a/b binding protein domain 55 259 - -
Cec10g0627 266 Pfam Chlorophyll A-B binding protein 65 233 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2143 Cec-Chr4:39272733 Cec10g0627 Cec-Chr10:8406037 8.40E-96 dispersed
Cec06g1811 Cec-Chr6:31568582 Cec10g0627 Cec-Chr10:8406037 2.50E-25 dispersed
Cec08g0043 Cec-Chr8:798001 Cec10g0627 Cec-Chr10:8406037 5.40E-52 dispersed
Cec10g0627 Cec-Chr10:8406037 Cec11g1955 Cec-Chr11:33598804 3.40E-44 dispersed
Cec10g0627 Cec-Chr10:8406037 Cec04g2142 Cec-Chr4:39269986 1.00E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0627 K08914 - csv:101207278 521.161