Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0685 ATGTTTTTCCTTGTTTTTACATTCTTCTCTCTTCTAGGCTTCTCTTCTTCCCACAGTTTGGTCAGTGATTTCCATGTTTTGCTTGCTCTCAAACAAGGGTTTCAATTCTCCGACTCTGCTGCACTAAGCACTTGGACTGCCTCAAACTTCAACTCAGTTTGTTCATGGGTTGGGATTCAGTGCTCTGACGGACGAGTTGTGTCAGTCAACTTGACAGATTTGAGTCTTGGTGGCTATGTTTCACCGTTGATTTCAAGTCTTGACCAACTTACTGAGCTGTCTGTCGCAGGAAATAACTTCTCTGGTGACATTGAAGTAGTGAATTTGAGTTATCTTCGATTCCTTAACATCTCAAACAACCAGTTCACTGGGACTCTGCACTGGAACTTTTCGAGCCTGCCGAACTTGGAGGTGTTGGATGCCTATAACAACAACTTCAGTGCTCTTCTCCCCACAGAGATTGTGAATTTACAGAACCTCAAATACTTGGACCTTGGAGGTAACTTTTTCCATGGAAAAATCCCTGAAAGCTATGGCAGTTTAGAAGGGTTGCAATATTTTTCTATTGGAGGAAATGATTTGGTTGGGAAAATCCCAGGAACGTTGGGAAATCTCACAAATTTGAGAGAAATTCACTTGGGCTATTACAATGTTTTCGAAGGGGGGATTCCACCTGAGCTAGGGAAGTTGACCAATTTGGTTATCATGGAGATTGCAGACTGCAGTTTGGATGGGGAAATTCCTCATGAACTTGGAAATTTGAAGGCCTTGAACACTCTATATTTGCATACAAATCTACTCTCAGGTTCGATTCCAAAGCAGTTAGGCAATCTGACAAACTTGGTCAATCTGGATCTCTCCAACAATGCACTCACAGGAGAAATCCCATCTGAGTTTGTTGAGCTCAAACAGCTCAACCTGTACAACCTCTTCATGAACAAGCTGCACGGATCTATTCCAGACTACATAGCAGATTTGCCGAACTTGGAGACCTTGGACCTGTGGATGAACAACTTTACCGGCACAATTCCGAAGAATCTTGGCCAAAATGGGAGGCTTCAGCTCCTTGACTTGTCGACAAACAAGCTCACGGGTACAATACCTGAGGGTTTGTGTTCATCAAACCAGCTGAAAATACTGATTCTGATGAACAACTTCCTGTTTGGGCCAATCCCTGAAGGTCTGGGGACATGTACCAGTCTTACAAAAGTGAGGTTGGGGCAGAACTATCTGAATGGAAGCATTCCCAATGGCTTCATTTACTTGCCTCAGCTAAATTTAGCAGAGTTTCAGGACAATTACCTTTCAGGAACTTTACCAACTTCACTTTCTAATTTGTCTTCTCTGCAAATTCTCCTCCTCAATGGCAACCAGTTTTCTGGTACAATCCCTCCTTCCATTGGAGAACTCAATCAACTTCTAAAGCTTGATCTCAGCAGAAACTCACTTTCGGGTGAAATTCCACCTGAAATTGGTTATTGTATCCATCTCACTTACCTTGATTTGAGCAGGAACAACCTTTCTGGCCCAATTCCCCCTGAAATTTCCAATGCACATATTCTCAATTACCTCAACTTGTCGAGAAATCACCTAAATCAATCCCTACCGAAATCAATAGGGACAATGAAGAGCCTGACGATTGCTGATTTCTCCTTCAACGATTTCTCGGGGAAGCTACCGGAATCAGGACAGCTTGCCTTCTTCAATGCTTCATCCTTCGCCGGAAATCCCCAACTTTGCGGCTCTCTCCTCAACAATCCCTGCAACTTCGCAACAACAACAACAAAACCGGGAAAAACGCCGACGTATTTCAAGCTAATCTTCGCTCTCGGCCTATTGATTTGCTCTCTAGTGTTCGCCATAGCGGCAGTAGTCAAAGCGAAATCATTCAAAAGAAACGGATCAAGTTCATGGAAAATGACCTCATTCCAAAAGCTTGAATTCACCGTCTACGACGTCTTGGAGTGCGTGAAAGACGGCAACGTTATCGGAAGAGGCGGCGCCGGCATCGTCTACCACGGGAAAATGCCGAACGGAGTTGAAATCGCAGTGAAGAAACTCCTAGGGTTCGGCCCTAACAGCCACGACCACGGATTCCGAGCCGAAATCCAAACCCTAGGCAACATTCGACACCGAAACATCGTCAGATTACTCGCATTCTGCTCCAATAAAGAGACAAACCTCCTCGTATATGAATACATGAGGAATGGAAGTTTAGGCGAAGCACTCCACGGCAAAAAAGCCTCGTTCCTCGGATGGAATTTGAGATACAAAATCGCCATTGAAGCCGCCAAAGGTCTCTGCTACCTCCACCACGATTGCTCTCCACTAATCGTCCATCGAGACGTGAAATCGAACAACATTCTCTTGAATTCGAACTTCGAAGCTCATGTCGCCGATTTCGGATTGGCGAAGTTCATGTTCGACGGCGGCGCGTCGGAATGCATGTCGGTGATCGCCGGATCTTACGGCTACATCGCTCCAGAATATGCATACACATTGAGAGTCGACGAGAAAAGTGATGTGTATAGTTTTGGAGTTGTGCTATTAGAACTTTTAACGGGGCGACGACCCGTTGGAGATTTTGGAGACGGAGTGGTTGATATAGCACAATGGTGCAAAAAAGCTCTAAGAGATGGTGAGAATGAAAACGACATTCTTTGCATAGTTGACAAAAGAGTAGGAATGGTGCCCAAAGAGGAAGCAAAACATTTATTCTTCATAGCAATGTTATGTGTGCAAGAGAATAGCGTGGAAAGACCAACAATGAGAGAAGTTGTTCAAATGTTGGCTGAATTTCCTCACCAGTCTCCCAACTGTTACCAATCTTCCTCTTCTTCTTCTCCCTGTCAAAAATTGAAGAATGGTGAAAAGGAAAGAAAACATCAGTCAAAGTCCAAATCAGATCTTTTAGTATAA 2919 44.16 MFFLVFTFFSLLGFSSSHSLVSDFHVLLALKQGFQFSDSAALSTWTASNFNSVCSWVGIQCSDGRVVSVNLTDLSLGGYVSPLISSLDQLTELSVAGNNFSGDIEVVNLSYLRFLNISNNQFTGTLHWNFSSLPNLEVLDAYNNNFSALLPTEIVNLQNLKYLDLGGNFFHGKIPESYGSLEGLQYFSIGGNDLVGKIPGTLGNLTNLREIHLGYYNVFEGGIPPELGKLTNLVIMEIADCSLDGEIPHELGNLKALNTLYLHTNLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPSEFVELKQLNLYNLFMNKLHGSIPDYIADLPNLETLDLWMNNFTGTIPKNLGQNGRLQLLDLSTNKLTGTIPEGLCSSNQLKILILMNNFLFGPIPEGLGTCTSLTKVRLGQNYLNGSIPNGFIYLPQLNLAEFQDNYLSGTLPTSLSNLSSLQILLLNGNQFSGTIPPSIGELNQLLKLDLSRNSLSGEIPPEIGYCIHLTYLDLSRNNLSGPIPPEISNAHILNYLNLSRNHLNQSLPKSIGTMKSLTIADFSFNDFSGKLPESGQLAFFNASSFAGNPQLCGSLLNNPCNFATTTTKPGKTPTYFKLIFALGLLICSLVFAIAAVVKAKSFKRNGSSSWKMTSFQKLEFTVYDVLECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGPNSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKASFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSNFEAHVADFGLAKFMFDGGASECMSVIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVVDIAQWCKKALRDGENENDILCIVDKRVGMVPKEEAKHLFFIAMLCVQENSVERPTMREVVQMLAEFPHQSPNCYQSSSSSSPCQKLKNGEKERKHQSKSKSDLLV 972
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9530650 9535035 - CePI673135_10g006850.1 Cec10g0685 213600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0685 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 130 217 - -
Cec10g0685 972 Gene3D Ribonuclease Inhibitor 373 463 IPR032675 -
Cec10g0685 972 Gene3D Ribonuclease Inhibitor 271 372 IPR032675 -
Cec10g0685 972 Gene3D Ribonuclease Inhibitor 21 174 IPR032675 -
Cec10g0685 972 Gene3D Ribonuclease Inhibitor 175 270 IPR032675 -
Cec10g0685 972 Pfam Leucine Rich Repeat 521 541 IPR001611 GO:0005515(InterPro)
Cec10g0685 972 Pfam Leucine Rich Repeat 112 133 IPR001611 GO:0005515(InterPro)
Cec10g0685 972 Pfam Leucine Rich Repeat 496 517 IPR001611 GO:0005515(InterPro)
Cec10g0685 972 Pfam Leucine Rich Repeat 280 300 IPR001611 GO:0005515(InterPro)
Cec10g0685 972 Pfam Leucine Rich Repeat 159 181 IPR001611 GO:0005515(InterPro)
Cec10g0685 972 Pfam Leucine Rich Repeat 448 470 IPR001611 GO:0005515(InterPro)
Cec10g0685 972 Pfam Leucine Rich Repeat 352 373 IPR001611 GO:0005515(InterPro)
Cec10g0685 972 Pfam Leucine Rich Repeat 135 157 IPR001611 GO:0005515(InterPro)
Cec10g0685 972 Pfam Leucine Rich Repeat 328 349 IPR001611 GO:0005515(InterPro)
Cec10g0685 972 Pfam Leucine Rich Repeat 473 494 IPR001611 GO:0005515(InterPro)
Cec10g0685 972 PRINTS Leucine-rich repeat signature 470 483 - -
Cec10g0685 972 PRINTS Leucine-rich repeat signature 353 366 - -
Cec10g0685 972 SUPERFAMILY L domain-like 337 581 - -
Cec10g0685 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 626 733 - -
Cec10g0685 972 ProSiteProfiles Protein kinase domain profile. 657 933 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0685 972 Pfam Protein tyrosine and serine/threonine kinase 660 930 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g0685 972 Gene3D Transferase(Phosphotransferase) domain 1 734 953 - -
Cec10g0685 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g0685 972 MobiDBLite consensus disorder prediction 938 972 - -
Cec10g0685 972 Gene3D Phosphorylase Kinase; domain 1 621 733 - -
Cec10g0685 972 MobiDBLite consensus disorder prediction 938 952 - -
Cec10g0685 972 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 932 IPR050647 -
Cec10g0685 972 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 464 588 - -
Cec10g0685 972 MobiDBLite consensus disorder prediction 953 972 - -
Cec10g0685 972 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Cec10g0685 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 218 323 - -
Cec10g0685 972 SUPERFAMILY RNI-like 69 411 - -
Cec10g0685 972 SMART serkin_6 657 930 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0685 972 SUPERFAMILY Protein kinase-like (PK-like) 641 930 IPR011009 -
Cec10g0685 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 734 947 - -
Cec10g0685 972 SMART LRR_typ_2 157 181 IPR003591 -
Cec10g0685 972 SMART LRR_typ_2 133 156 IPR003591 -
Cec10g0685 972 SMART LRR_typ_2 326 350 IPR003591 -
Cec10g0685 972 SMART LRR_typ_2 446 468 IPR003591 -
Cec10g0685 972 SMART LRR_typ_2 278 302 IPR003591 -
Cec10g0685 972 SMART LRR_typ_2 495 518 IPR003591 -
Cec10g0685 972 SMART LRR_typ_2 351 374 IPR003591 -
Cec10g0685 972 SMART LRR_typ_2 470 494 IPR003591 -
Cec10g0685 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 376 447 - -
Cec10g0685 972 Gene3D Ribonuclease Inhibitor 464 590 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0685 Cec-Chr10:9530650 Cec10g0788 Cec-Chr10:12939079 1.60E-139 dispersed
Cec10g0685 Cec-Chr10:9530650 Cec04g1496 Cec-Chr4:34477962 6.40E-141 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72307 PF07714 PK_Tyr_Ser-Thr 1.50E-43 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0685 - - - 0.0