Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0725 | ACTTTGAGCAATAAACCCAATCAGTCGTGTGACCATGTTGGGTCTTTGAAGATGGATTTTGATGACACAGCTGTTGAGAGTCAGACAGCCTCAAAAAGGCCATCCATGCTAGCCTTTGAAAAGGGAAGCTTGCCAAAAGCTGCATTGGCATTTATTGATGCCATCAAGAAAAATAGGTCCCAGCAGAAGTTTATTCGTAGTAAGATGATTCATCTTGAAGCTAGAATTGAGGAGAACAAAAAGCTCAAAAAACGTTTCAAAATTCTCAAAGATTTCCAGGGTTCATGTAAACGGAGAACAACATGTGCACTGTCTCAAATGATAGATCCTCGAGTCCAGTTGATTTCAGCTGCAAAACCACAAGCAAAGGATTCATCAAAGAAGGACAAACGATTATCTGCAATGCATTATGGCCCAGCTGAGAATTCTCATGTTGCATGCTACAGAATGGCATTGATGAAGTTTCCTCGTGTTGATCGAAAAAAATGGTCCGTTGTAGAAAGGGAGAATCTAGGGAAGGGAATAAGACAGCAATTTCAGGAGATGGTGCTTCAGATTTCAGTGGATCAAATTAGTGGGCTACAAGGATTTTCTGCAGATTCAGATGATTTGGATAACATTCTTGCATCAATAAAAGACCTTGACATCACTCCTGAAAAGATTAGGGAATTTCTGCCAAAAGTTAATTGGGACAAATTGGCTTCCATGTATCTTCGGGGTCGATCAGGGGCAGAATGTGAAGCGAGGTGGTTGAATTTTGAAGACCCCCTAATTAATCGGGATCCATGGACTACAAGTGAGGATAAGAATCTTTTGTTTACTATCCAACAGAAGGGGTTGAATAACTGGATTGAGATAGCAGTTTCGTCGGGTACAAATAGAACTCCTTTTCAGTGCTTGTCTCGGTATCAAAGGAGTTTAAACGCTTCCATATTAAAGAGGGAGTGGACCAAAGACGAGGATGATAAACTTCGAGCTGCTGTTGCTACATTTGGCCTGGGAGATTGGCAGGCAGTAGCTTCTACTTTGGAAGGACGAACTGGCCCACAGTGTTCTAATAGGTGGAAAAAATCCCTTGACCCAGCTAGGACAAAAAGAGGTCATTTCACTCCAGATGAAGACAGTCGCTTGAAAATTGCTGTACTACTCTTTGGGCCTAAAAATTGGAACAAGAAAGCAGAATTTTTACCTGGTCGAAATCAAGTTCAATGCAGAGAAAGATGGTTTAATTGTTTAGATCCTTCCTTGAGAAGATGCGAATGGACAGAAGAGGAGGATTTAAGGCTGGAGATAGCAATTCAGGAACATGGATATAGCTGGGCTAAGGTAGCTGCATGTGTGCCGTCACGTACGGATAATGATTGTCGGAGGAGATGGAAGAAGTTATTTCCCAATGAAGTTCCGTTACTCCAGCAAGCTAGAAAGATTCAGAAGGCTGCTCTTATTAGCAACTTTGTTGATAGGGAATCAGAGCGTCCTGCTCTTGGTCCTACTGACTTTCGACCCAGGCCAAACACAGATTTATTGTGTAATAGTGTTGATCCAAGACCTGCCCCAAAAAGAAATGTGAAGACGAGAAAGATGCCAGTGTCAAGGAATGAAAAGAGTGCTACTGGTGATGCTCCAAAGAAGAGGAAATCAAATTGCCAGAGGAATCAGGCTGATGTAACTGCTCAGGCGGGTATTGCAAATAATACCTCTTCTGTCCCAGAGGAGGTTAAATCTCTAAAGCCTCAAAGAAAACAAAATAGACACGGAGCTTATACCGCAGAAAGTATAGGGGTTCCGGAGCTATGTCCTAACAGTGAGTGGTGTGCTAAACAGAGTTTGGACACTCAGAGCCTTGGGGTGCAGCTTAATAGTAAGGAATCTGAGGGGACCAACAGTGACTGCATCGAGACTGTTGATGAGAATGGTATGGAGGTATTTGAGAACAAAGTTGCAGAGAAACTTTCTGAAAGAGATGTATGTTTTTCAGAACCAGAAGCAATTCAAAACTCTACCGGATCTTCTGGAGTCTCGGTATTGTCAGAAATGACTAATGACATGGATGAATACAATCCGTCTATCCTTCCAGATACAACATTGTTGGCTAGTACTACTGTGGATGATCTCAAAGAATTGAAGAGGAAGAGTGTTGCAGACAGAGATCTGGATGACTGTAACAGTTTCTCGTTACCGTGCAGTGACTTGGAACTCAGGACAATCGACAACGAAGGTGTGGACAGTTATTCCATGGATGAATTTACAGATAAAAGCCATGGGGTTTGCAAGCCCCCCCATACCAGAAGGAAGAAAAACAGCAAAACATCAAGTAAGAGCCAGGATCATTCCTTTGTTTCTTGTCAACAAGTGGAGTTGGAGAGGTCGGGGACAAATGAGCCTTGTCGTCATAATCAATCAAAGAAGAGAAAACATAACAGTACAAATACGAATCTGGAGGCAGTTGAGGAGGTTGATGACTGCACACTCGTGGGCTTTTTGCAAAACAGATTGAAGAGGACGACGACAACAAATGACAAGAAAGTTGATTGCAGTTCAAGTACTCCCCTAGAAGTCGATACTGATGACAATGATCCTACCCTTACCTCGTTTCTTAATAAATTAAAGAGAAAAAAGCATCAGCCGAGTAGTGGTGGTGAGTTAAACTAG | 2652 | 42.31 | TLSNKPNQSCDHVGSLKMDFDDTAVESQTASKRPSMLAFEKGSLPKAALAFIDAIKKNRSQQKFIRSKMIHLEARIEENKKLKKRFKILKDFQGSCKRRTTCALSQMIDPRVQLISAAKPQAKDSSKKDKRLSAMHYGPAENSHVACYRMALMKFPRVDRKKWSVVERENLGKGIRQQFQEMVLQISVDQISGLQGFSADSDDLDNILASIKDLDITPEKIREFLPKVNWDKLASMYLRGRSGAECEARWLNFEDPLINRDPWTTSEDKNLLFTIQQKGLNNWIEIAVSSGTNRTPFQCLSRYQRSLNASILKREWTKDEDDKLRAAVATFGLGDWQAVASTLEGRTGPQCSNRWKKSLDPARTKRGHFTPDEDSRLKIAVLLFGPKNWNKKAEFLPGRNQVQCRERWFNCLDPSLRRCEWTEEEDLRLEIAIQEHGYSWAKVAACVPSRTDNDCRRRWKKLFPNEVPLLQQARKIQKAALISNFVDRESERPALGPTDFRPRPNTDLLCNSVDPRPAPKRNVKTRKMPVSRNEKSATGDAPKKRKSNCQRNQADVTAQAGIANNTSSVPEEVKSLKPQRKQNRHGAYTAESIGVPELCPNSEWCAKQSLDTQSLGVQLNSKESEGTNSDCIETVDENGMEVFENKVAEKLSERDVCFSEPEAIQNSTGSSGVSVLSEMTNDMDEYNPSILPDTTLLASTTVDDLKELKRKSVADRDLDDCNSFSLPCSDLELRTIDNEGVDSYSMDEFTDKSHGVCKPPHTRRKKNSKTSSKSQDHSFVSCQQVELERSGTNEPCRHNQSKKRKHNSTNTNLEAVEEVDDCTLVGFLQNRLKRTTTTNDKKVDCSSSTPLEVDTDDNDPTLTSFLNKLKRKKHQPSSGGELN | 883 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 10516886 | 10529982 | + | CePI673135_10g007250.1 | Cec10g0725 | 213640 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0725 | 883 | Gene3D | - | 257 | 308 | - | - | |
Cec10g0725 | 883 | ProSiteProfiles | Myb-like domain profile. | 413 | 463 | IPR001005 | - | |
Cec10g0725 | 883 | MobiDBLite | consensus disorder prediction | 748 | 812 | - | - | |
Cec10g0725 | 883 | ProSiteProfiles | Myb-like domain profile. | 255 | 307 | IPR001005 | - | |
Cec10g0725 | 883 | SUPERFAMILY | Homeodomain-like | 363 | 459 | IPR009057 | - | |
Cec10g0725 | 883 | Gene3D | - | 363 | 417 | - | - | |
Cec10g0725 | 883 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 308 | 363 | IPR017930 | - | |
Cec10g0725 | 883 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 413 | 467 | IPR017930 | - | |
Cec10g0725 | 883 | SUPERFAMILY | Homeodomain-like | 292 | 362 | IPR009057 | - | |
Cec10g0725 | 883 | Pfam | Myb-like DNA-binding domain | 418 | 462 | IPR001005 | - | |
Cec10g0725 | 883 | Pfam | Myb-like DNA-binding domain | 260 | 305 | IPR001005 | - | |
Cec10g0725 | 883 | Pfam | Myb-like DNA-binding domain | 366 | 412 | IPR001005 | - | |
Cec10g0725 | 883 | Pfam | Myb-like DNA-binding domain | 313 | 357 | IPR001005 | - | |
Cec10g0725 | 883 | CDD | SANT | 369 | 410 | IPR001005 | - | |
Cec10g0725 | 883 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 365 | 412 | IPR017930 | - | |
Cec10g0725 | 883 | MobiDBLite | consensus disorder prediction | 551 | 573 | - | - | |
Cec10g0725 | 883 | Gene3D | - | 420 | 466 | - | - | |
Cec10g0725 | 883 | MobiDBLite | consensus disorder prediction | 837 | 861 | - | - | |
Cec10g0725 | 883 | SMART | sant | 312 | 361 | IPR001005 | - | |
Cec10g0725 | 883 | SMART | sant | 159 | 256 | IPR001005 | - | |
Cec10g0725 | 883 | SMART | sant | 365 | 414 | IPR001005 | - | |
Cec10g0725 | 883 | SMART | sant | 417 | 465 | IPR001005 | - | |
Cec10g0725 | 883 | SMART | sant | 259 | 309 | IPR001005 | - | |
Cec10g0725 | 883 | Gene3D | - | 312 | 362 | - | - | |
Cec10g0725 | 883 | ProSiteProfiles | SANT domain profile. | 311 | 360 | IPR017884 | - | |
Cec10g0725 | 883 | CDD | SANT | 420 | 463 | IPR001005 | - | |
Cec10g0725 | 883 | MobiDBLite | consensus disorder prediction | 527 | 550 | - | - | |
Cec10g0725 | 883 | ProSiteProfiles | Myb-like domain profile. | 361 | 412 | IPR001005 | - | |
Cec10g0725 | 883 | ProSiteProfiles | Myb-like domain profile. | 308 | 359 | IPR001005 | - | |
Cec10g0725 | 883 | PANTHER | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 | 28 | 837 | IPR051575 | GO:0000978(PANTHER)|GO:0001006(PANTHER)|GO:0019185(PANTHER)|GO:0042795(PANTHER)|GO:0042796(PANTHER) | |
Cec10g0725 | 883 | MobiDBLite | consensus disorder prediction | 491 | 585 | - | - | |
Cec10g0725 | 883 | MobiDBLite | consensus disorder prediction | 841 | 861 | - | - | |
Cec10g0725 | 883 | SUPERFAMILY | Homeodomain-like | 252 | 308 | IPR009057 | - | |
Cec10g0725 | 883 | CDD | SANT | 315 | 359 | IPR001005 | - | |
Cec10g0725 | 883 | MobiDBLite | consensus disorder prediction | 773 | 790 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g1057 | Cec-Chr6:17423665 | Cec10g0725 | Cec-Chr10:10516886 | 1.30E-10 | dispersed | |
Cec10g0725 | Cec-Chr10:10516886 | Cec10g0505 | Cec-Chr10:6090664 | 4.00E-09 | dispersed | |
Cec10g0725 | Cec-Chr10:10516886 | Cec06g1902 | Cec-Chr6:32389217 | 2.60E-16 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30354 | PF13921 | Myb_DNA-bind_6 | 2.10E-11 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0725 | K09422 | - | csv:101216287 | 1472.6 |