Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0725 ACTTTGAGCAATAAACCCAATCAGTCGTGTGACCATGTTGGGTCTTTGAAGATGGATTTTGATGACACAGCTGTTGAGAGTCAGACAGCCTCAAAAAGGCCATCCATGCTAGCCTTTGAAAAGGGAAGCTTGCCAAAAGCTGCATTGGCATTTATTGATGCCATCAAGAAAAATAGGTCCCAGCAGAAGTTTATTCGTAGTAAGATGATTCATCTTGAAGCTAGAATTGAGGAGAACAAAAAGCTCAAAAAACGTTTCAAAATTCTCAAAGATTTCCAGGGTTCATGTAAACGGAGAACAACATGTGCACTGTCTCAAATGATAGATCCTCGAGTCCAGTTGATTTCAGCTGCAAAACCACAAGCAAAGGATTCATCAAAGAAGGACAAACGATTATCTGCAATGCATTATGGCCCAGCTGAGAATTCTCATGTTGCATGCTACAGAATGGCATTGATGAAGTTTCCTCGTGTTGATCGAAAAAAATGGTCCGTTGTAGAAAGGGAGAATCTAGGGAAGGGAATAAGACAGCAATTTCAGGAGATGGTGCTTCAGATTTCAGTGGATCAAATTAGTGGGCTACAAGGATTTTCTGCAGATTCAGATGATTTGGATAACATTCTTGCATCAATAAAAGACCTTGACATCACTCCTGAAAAGATTAGGGAATTTCTGCCAAAAGTTAATTGGGACAAATTGGCTTCCATGTATCTTCGGGGTCGATCAGGGGCAGAATGTGAAGCGAGGTGGTTGAATTTTGAAGACCCCCTAATTAATCGGGATCCATGGACTACAAGTGAGGATAAGAATCTTTTGTTTACTATCCAACAGAAGGGGTTGAATAACTGGATTGAGATAGCAGTTTCGTCGGGTACAAATAGAACTCCTTTTCAGTGCTTGTCTCGGTATCAAAGGAGTTTAAACGCTTCCATATTAAAGAGGGAGTGGACCAAAGACGAGGATGATAAACTTCGAGCTGCTGTTGCTACATTTGGCCTGGGAGATTGGCAGGCAGTAGCTTCTACTTTGGAAGGACGAACTGGCCCACAGTGTTCTAATAGGTGGAAAAAATCCCTTGACCCAGCTAGGACAAAAAGAGGTCATTTCACTCCAGATGAAGACAGTCGCTTGAAAATTGCTGTACTACTCTTTGGGCCTAAAAATTGGAACAAGAAAGCAGAATTTTTACCTGGTCGAAATCAAGTTCAATGCAGAGAAAGATGGTTTAATTGTTTAGATCCTTCCTTGAGAAGATGCGAATGGACAGAAGAGGAGGATTTAAGGCTGGAGATAGCAATTCAGGAACATGGATATAGCTGGGCTAAGGTAGCTGCATGTGTGCCGTCACGTACGGATAATGATTGTCGGAGGAGATGGAAGAAGTTATTTCCCAATGAAGTTCCGTTACTCCAGCAAGCTAGAAAGATTCAGAAGGCTGCTCTTATTAGCAACTTTGTTGATAGGGAATCAGAGCGTCCTGCTCTTGGTCCTACTGACTTTCGACCCAGGCCAAACACAGATTTATTGTGTAATAGTGTTGATCCAAGACCTGCCCCAAAAAGAAATGTGAAGACGAGAAAGATGCCAGTGTCAAGGAATGAAAAGAGTGCTACTGGTGATGCTCCAAAGAAGAGGAAATCAAATTGCCAGAGGAATCAGGCTGATGTAACTGCTCAGGCGGGTATTGCAAATAATACCTCTTCTGTCCCAGAGGAGGTTAAATCTCTAAAGCCTCAAAGAAAACAAAATAGACACGGAGCTTATACCGCAGAAAGTATAGGGGTTCCGGAGCTATGTCCTAACAGTGAGTGGTGTGCTAAACAGAGTTTGGACACTCAGAGCCTTGGGGTGCAGCTTAATAGTAAGGAATCTGAGGGGACCAACAGTGACTGCATCGAGACTGTTGATGAGAATGGTATGGAGGTATTTGAGAACAAAGTTGCAGAGAAACTTTCTGAAAGAGATGTATGTTTTTCAGAACCAGAAGCAATTCAAAACTCTACCGGATCTTCTGGAGTCTCGGTATTGTCAGAAATGACTAATGACATGGATGAATACAATCCGTCTATCCTTCCAGATACAACATTGTTGGCTAGTACTACTGTGGATGATCTCAAAGAATTGAAGAGGAAGAGTGTTGCAGACAGAGATCTGGATGACTGTAACAGTTTCTCGTTACCGTGCAGTGACTTGGAACTCAGGACAATCGACAACGAAGGTGTGGACAGTTATTCCATGGATGAATTTACAGATAAAAGCCATGGGGTTTGCAAGCCCCCCCATACCAGAAGGAAGAAAAACAGCAAAACATCAAGTAAGAGCCAGGATCATTCCTTTGTTTCTTGTCAACAAGTGGAGTTGGAGAGGTCGGGGACAAATGAGCCTTGTCGTCATAATCAATCAAAGAAGAGAAAACATAACAGTACAAATACGAATCTGGAGGCAGTTGAGGAGGTTGATGACTGCACACTCGTGGGCTTTTTGCAAAACAGATTGAAGAGGACGACGACAACAAATGACAAGAAAGTTGATTGCAGTTCAAGTACTCCCCTAGAAGTCGATACTGATGACAATGATCCTACCCTTACCTCGTTTCTTAATAAATTAAAGAGAAAAAAGCATCAGCCGAGTAGTGGTGGTGAGTTAAACTAG 2652 42.31 TLSNKPNQSCDHVGSLKMDFDDTAVESQTASKRPSMLAFEKGSLPKAALAFIDAIKKNRSQQKFIRSKMIHLEARIEENKKLKKRFKILKDFQGSCKRRTTCALSQMIDPRVQLISAAKPQAKDSSKKDKRLSAMHYGPAENSHVACYRMALMKFPRVDRKKWSVVERENLGKGIRQQFQEMVLQISVDQISGLQGFSADSDDLDNILASIKDLDITPEKIREFLPKVNWDKLASMYLRGRSGAECEARWLNFEDPLINRDPWTTSEDKNLLFTIQQKGLNNWIEIAVSSGTNRTPFQCLSRYQRSLNASILKREWTKDEDDKLRAAVATFGLGDWQAVASTLEGRTGPQCSNRWKKSLDPARTKRGHFTPDEDSRLKIAVLLFGPKNWNKKAEFLPGRNQVQCRERWFNCLDPSLRRCEWTEEEDLRLEIAIQEHGYSWAKVAACVPSRTDNDCRRRWKKLFPNEVPLLQQARKIQKAALISNFVDRESERPALGPTDFRPRPNTDLLCNSVDPRPAPKRNVKTRKMPVSRNEKSATGDAPKKRKSNCQRNQADVTAQAGIANNTSSVPEEVKSLKPQRKQNRHGAYTAESIGVPELCPNSEWCAKQSLDTQSLGVQLNSKESEGTNSDCIETVDENGMEVFENKVAEKLSERDVCFSEPEAIQNSTGSSGVSVLSEMTNDMDEYNPSILPDTTLLASTTVDDLKELKRKSVADRDLDDCNSFSLPCSDLELRTIDNEGVDSYSMDEFTDKSHGVCKPPHTRRKKNSKTSSKSQDHSFVSCQQVELERSGTNEPCRHNQSKKRKHNSTNTNLEAVEEVDDCTLVGFLQNRLKRTTTTNDKKVDCSSSTPLEVDTDDNDPTLTSFLNKLKRKKHQPSSGGELN 883
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10516886 10529982 + CePI673135_10g007250.1 Cec10g0725 213640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0725 883 Gene3D - 257 308 - -
Cec10g0725 883 ProSiteProfiles Myb-like domain profile. 413 463 IPR001005 -
Cec10g0725 883 MobiDBLite consensus disorder prediction 748 812 - -
Cec10g0725 883 ProSiteProfiles Myb-like domain profile. 255 307 IPR001005 -
Cec10g0725 883 SUPERFAMILY Homeodomain-like 363 459 IPR009057 -
Cec10g0725 883 Gene3D - 363 417 - -
Cec10g0725 883 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 308 363 IPR017930 -
Cec10g0725 883 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 413 467 IPR017930 -
Cec10g0725 883 SUPERFAMILY Homeodomain-like 292 362 IPR009057 -
Cec10g0725 883 Pfam Myb-like DNA-binding domain 418 462 IPR001005 -
Cec10g0725 883 Pfam Myb-like DNA-binding domain 260 305 IPR001005 -
Cec10g0725 883 Pfam Myb-like DNA-binding domain 366 412 IPR001005 -
Cec10g0725 883 Pfam Myb-like DNA-binding domain 313 357 IPR001005 -
Cec10g0725 883 CDD SANT 369 410 IPR001005 -
Cec10g0725 883 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 365 412 IPR017930 -
Cec10g0725 883 MobiDBLite consensus disorder prediction 551 573 - -
Cec10g0725 883 Gene3D - 420 466 - -
Cec10g0725 883 MobiDBLite consensus disorder prediction 837 861 - -
Cec10g0725 883 SMART sant 312 361 IPR001005 -
Cec10g0725 883 SMART sant 159 256 IPR001005 -
Cec10g0725 883 SMART sant 365 414 IPR001005 -
Cec10g0725 883 SMART sant 417 465 IPR001005 -
Cec10g0725 883 SMART sant 259 309 IPR001005 -
Cec10g0725 883 Gene3D - 312 362 - -
Cec10g0725 883 ProSiteProfiles SANT domain profile. 311 360 IPR017884 -
Cec10g0725 883 CDD SANT 420 463 IPR001005 -
Cec10g0725 883 MobiDBLite consensus disorder prediction 527 550 - -
Cec10g0725 883 ProSiteProfiles Myb-like domain profile. 361 412 IPR001005 -
Cec10g0725 883 ProSiteProfiles Myb-like domain profile. 308 359 IPR001005 -
Cec10g0725 883 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 28 837 IPR051575 GO:0000978(PANTHER)|GO:0001006(PANTHER)|GO:0019185(PANTHER)|GO:0042795(PANTHER)|GO:0042796(PANTHER)
Cec10g0725 883 MobiDBLite consensus disorder prediction 491 585 - -
Cec10g0725 883 MobiDBLite consensus disorder prediction 841 861 - -
Cec10g0725 883 SUPERFAMILY Homeodomain-like 252 308 IPR009057 -
Cec10g0725 883 CDD SANT 315 359 IPR001005 -
Cec10g0725 883 MobiDBLite consensus disorder prediction 773 790 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1057 Cec-Chr6:17423665 Cec10g0725 Cec-Chr10:10516886 1.30E-10 dispersed
Cec10g0725 Cec-Chr10:10516886 Cec10g0505 Cec-Chr10:6090664 4.00E-09 dispersed
Cec10g0725 Cec-Chr10:10516886 Cec06g1902 Cec-Chr6:32389217 2.60E-16 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30354 PF13921 Myb_DNA-bind_6 2.10E-11 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0725 K09422 - csv:101216287 1472.6