Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0733 ATGGAGGGAATGCCGCACCCAATACCCCGTACAGTGGAGGAGGTCTACGGCGACTTCAAAGGCAGGCGTGCCGGCTTGATCAAAGCCCTCACCACTGATGTCGAGAAGTTCTACCAGCAGTGCGATCCTGAGAAGGAGAACTTGTGTCTCTATGGACTTCCAAATGAAACGTGGGAAGTTAACTTGCCGGTGGAGGAGGTGCCTCCTGAGCTCCCAGAACCAGCATTAGGTATAAACTTTGCAAGGGATGGGATGCAGGAGAAAGACTGGTTATCGCTGGTTGCAGTTCACAGTGACTCATGGTTGCTTGCTGTTGCATTCTATTTTGGTGCTCGTTTTGGGTTTGGGAAGACTGAAAGGAAGAGGCTATTCCAGATGATCAACGATCTCCCAAGTGTATTTGAAGTTGTGACTGGAAATGGTAAGCAGTCGAAAGAGCAGTCTGCCACACATAACAATGGCAGTAAAAGCAAGTCGAGTGGAAAGATGTCCCGGCAATTGGAGTCCCATAGCAAGGGAGTGAAGATGTCTCCACCACCGAAAGAGGATGAAGATAGCGGGGAAGATGAGGAGGAAGAAGAAGATGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAATGACGAATTCTGGATTTGTTGCGATGTGTGTGAAAGATGGTTCCATGGAAAATGTGTGAAGATTACACCTGCAAAGGCGGAGCATATCAAGCAATACAAGTGTCCAAGTTGCAGTAACAAGAGAGCAAGGGCTGTCTATGGCAGGGCCGGGAGGACCTGGAATGAAAGTGATTTGTTCTGCCTTTATGCTTGTTGGTTGAAGGCTGAGGTCTGTTTGAATGATTTAACGTTATCTAACAAACAGGAGAAGACAATGAGCAATGTCAAGTCTTACTTGTTTGAATGCTTGTCTGTGGACTTCTTAAGCAATTGGGAGAACTTGGTATCGCTTAATGGAAATGAAAACAGAAAGGAGAACAAAAATCCATTGCAATGA 1008 46.83 MEGMPHPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDLPSVFEVVTGNGKQSKEQSATHNNGSKSKSSGKMSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARAVYGRAGRTWNESDLFCLYACWLKAEVCLNDLTLSNKQEKTMSNVKSYLFECLSVDFLSNWENLVSLNGNENRKENKNPLQ 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10707031 10714430 - CePI673135_10g007330.1 Cec10g0733 213648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0733 335 MobiDBLite consensus disorder prediction 141 200 - -
Cec10g0733 335 Pfam Alfin 11 138 IPR021998 GO:0006355(InterPro)|GO:0042393(InterPro)
Cec10g0733 335 Pfam PHD-finger 202 248 IPR019787 -
Cec10g0733 335 ProSitePatterns Zinc finger PHD-type signature. 202 248 IPR019786 -
Cec10g0733 335 FunFam PHD finger alfin-like protein 194 250 - -
Cec10g0733 335 PANTHER CPG BINDING PROTEIN 9 254 IPR045104 GO:0000976(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0042393(InterPro)
Cec10g0733 335 CDD PHD_AL_plant 202 251 IPR044104 -
Cec10g0733 335 MobiDBLite consensus disorder prediction 141 162 - -
Cec10g0733 335 MobiDBLite consensus disorder prediction 183 200 - -
Cec10g0733 335 ProSiteProfiles Zinc finger PHD-type profile. 199 251 IPR019787 -
Cec10g0733 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 250 IPR013083 -
Cec10g0733 335 SUPERFAMILY FYVE/PHD zinc finger 190 254 IPR011011 -
Cec10g0733 335 MobiDBLite consensus disorder prediction 163 182 - -
Cec10g0733 335 SMART PHD_3 201 249 IPR001965 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1587 Cec-Chr3:33977808 Cec10g0733 Cec-Chr10:10707031 1.80E-30 dispersed
Cec09g0082 Cec-Chr9:715298 Cec10g0733 Cec-Chr10:10707031 1.20E-94 dispersed
Cec10g0733 Cec-Chr10:10707031 Cec10g2211 Cec-Chr10:36517318 2.00E-81 dispersed
Cec10g0733 Cec-Chr10:10707031 Cec11g0170 Cec-Chr11:1873021 4.60E-99 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30355 PF12165 Alfin 4.70E-68 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0733 K26274 - csv:101212601 486.878