Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0760 | ATGGCTCCTGCCACTAACTGGCTCTCCTTCTCTCTTTCCCCCATTGAAATGCTTCGCTCCACTGATTCTCCCTTTCTTCCTTATGATTCTTCCTCCACCCCCTCCCCTCACTATCTCCTCGACAATTTCTACTCTCATAATGGATGGAGTAACAATAATACATCTCACCCAAAATCATCTCAACTTTTCTTCATGGATGGAGATGAAAATAACGATGCTGTGAAAGAAGACCAAACAACGACACCCACCATTTTTAGTACCTTCCTTCATCCACAAACCCATCACCACCACCAACCCAAGCTTGAAGATTTCCTGGGCGATTCCTCTCCCATGGTGCGATATTCCGACAGCCAAACCGACACTCAAGATTCCTCTTTAACTCATATTTACGACCATGCTTCCGCCCCCCCTTACTTCGCCGACCAACAAGATCTCAAAACCATTGCTGCTTTTCAAGCTTTTTCAGCCAACTCTGGCTCTGAAGTTGATGATTCTGCTTCTATTGCTAGAACCCATATCCCCTCTGCTCATTCTATTGAATCTTCTCTCACTAATAATGAGTTGCCCTCTTTCTCTAACTGCCCTACCGGTGCTCTCTCACTCGCTGTCGCTCACTCCTCCGACACCGCCACTGCTGGGCCTATTGTGGCTGTAGATTCTGAGTCCTCTAAGAAAATTGCTGATACTTTTGGCCAGAGAACTTCCATTTACAGAGGAGTCACTAGGCACAGATGGACGGGTAGATACGAAGCGCATCTATGGGATAACAGCTGTAGAAGAGAGGGTCAGGCTAGGAAAGGACGTCAAGGTGGGTATGATAAGGAGGAAAAAGCAGCTAGGGCTTATGATTTGGCGGCTTTGAAGTACTGGGGTCCCACAGCAACCACCAATTTTCCTGTTTCAAATTATGCCAAGGAATTGGAAGAAATGAAACATGTCACCAAACAAGAGTTTATCGCTTCCTTGCGAAGAAAGAGCAGCGGTTTTTCGCGAGGTGCCTCTATTTATAGAGGTGTAACAAGGCATCATCAGCAGGGTCGATGGCAGGCAAGAATTGGTCGTGTTGCTGGCAACAAGGACTTGTATCTCGGGACGTTTGCTACTGAAGAGGAAGCAGCCGAGGCTTACGATATAGCAGCAATCAAGTTTAGAGGTTTGAATGCTGTGACAAACTTTGAGATGAGTCGATATGATGTGGAAGCTATTGCAAAGAGTGCGCTGCCTATCGGGGGAGCAGCAAAGAGGCTAAAGCTTTGTCTGGAATCCGAACAGAAGCCGATTCCAAATCACGATCAAGCAACCCAATGCAGCAGTGGAAGCAACAATATCAACTTTGGCACCACTGTGCAAGCTGTGCCACCAATCCCTTGTGGTATTCCATACGACACTGCAGCTGTGCTGTATCACCATAATTACTTCCATCATCTTCAACCTAATGCCATCGGTTCGTCGGAGTCGACCAGCCCAGGCATTGCAGGACTGGGGACTGTGGCACCTCAAGCAGCCGAGTTTTTTGTTTGGCCTCGCCAATCGTATTAA | 1539 | 47.3 | MAPATNWLSFSLSPIEMLRSTDSPFLPYDSSSTPSPHYLLDNFYSHNGWSNNNTSHPKSSQLFFMDGDENNDAVKEDQTTTPTIFSTFLHPQTHHHHQPKLEDFLGDSSPMVRYSDSQTDTQDSSLTHIYDHASAPPYFADQQDLKTIAAFQAFSANSGSEVDDSASIARTHIPSAHSIESSLTNNELPSFSNCPTGALSLAVAHSSDTATAGPIVAVDSESSKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYAKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGLNAVTNFEMSRYDVEAIAKSALPIGGAAKRLKLCLESEQKPIPNHDQATQCSSGSNNINFGTTVQAVPPIPCGIPYDTAAVLYHHNYFHHLQPNAIGSSESTSPGIAGLGTVAPQAAEFFVWPRQSY | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 11464649 | 11468415 | - | CePI673135_10g007600.1 | Cec10g0760 | 213675 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0760 | 512 | ProSiteProfiles | AP2/ERF domain profile. | 236 | 299 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0760 | 512 | CDD | AP2 | 235 | 301 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0760 | 512 | SUPERFAMILY | DNA-binding domain | 334 | 395 | IPR016177 | GO:0003677(InterPro) | |
Cec10g0760 | 512 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 142 | 429 | - | - | |
Cec10g0760 | 512 | Pfam | AP2 domain | 336 | 385 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0760 | 512 | SUPERFAMILY | DNA-binding domain | 235 | 301 | IPR016177 | GO:0003677(InterPro) | |
Cec10g0760 | 512 | CDD | AP2 | 334 | 395 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0760 | 512 | SMART | rav1_2 | 335 | 399 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0760 | 512 | SMART | rav1_2 | 236 | 305 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0760 | 512 | PRINTS | Ethylene responsive element binding protein signature | 375 | 395 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0760 | 512 | PRINTS | Ethylene responsive element binding protein signature | 237 | 248 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0760 | 512 | FunFam | AP2-like ethylene-responsive transcription factor | 334 | 395 | - | - | |
Cec10g0760 | 512 | ProSiteProfiles | AP2/ERF domain profile. | 335 | 393 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0760 | 512 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 235 | 301 | - | - | |
Cec10g0760 | 512 | Gene3D | AP2/ERF domain | 335 | 395 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g0760 | 512 | Gene3D | AP2/ERF domain | 236 | 301 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g1733 | Cec-Chr8:28445373 | Cec10g0760 | Cec-Chr10:11464649 | 2.60E-85 | dispersed | |
Cec10g0760 | Cec-Chr10:11464649 | Cec11g0922 | Cec-Chr11:14235145 | 4.90E-100 | dispersed | |
Cec10g0760 | Cec-Chr10:11464649 | Cec04g1474 | Cec-Chr4:34282342 | 4.00E-86 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30357 | PF00847 | AP2 | 1.90E-09 | CL0081 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0760 | K09285 | - | csv:101217714 | 879.396 |