Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0784 ATGCCATTTCTGAACCTTCCTCCATCTTCTCCCCACCTTCTTTTCTTCATCTTTTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCAGTTCTCTGTTTTCGCTCTCTTCTCCAACCACGATTACTATATTCTGATACGAATTAAAAACACCCATCTCGATGATCCCAAAGGCTGTTTGAACAATTGGGTTCCCAACCAAGCTCACAACCCCTGTAATTGGACTGGAATCACCTGCGATTCCACTAATTCCTCTGTTCTCTCCATCGATCTCAATGATTCCGGCGTCTCCGGCGGATTTCCCTTCGAGTTTTGCCGGATTTCGTCTCTGAAATCCCTTTCTATCTCCAACTGCAGCGTCAATGGAACTTTACTCTCTCCTTCCTTCTCTCTCTGTTCTCACTTGCAACTCCTTAATCTTTCCTCTAACTTACTCGTCGGGAACTTGCCGGAGTTTTCCGCTGGTTTCACACAACTGAAAATTCTCGATCTCTCCGCCAACAATTTCACCGGTGATATTCCTCAAAGCTTCGGACAGTTACCGGCGCTGAGAGTGCTCCGTTTGTCGCAGAATCTGCTCAACGGCTCATTACCTTCTTTTCTGGGAAATCTCAGTGAGCTAACTGAAATGGCCATCGCTTATAATAATTTCAAACCCAATCGGTTACCACCTGAAATCGGAAACCTGAAGAAACTTGTAAACCTGTTTTTACCGTTTTCGAATTTCGTTGGACCCATTCCTGATTCCATCGGCAACCTTACTTTGCTTACTAATCTCGATTTATCTAGTAATTCTATTTCGGGTCCGATCCCGGATTCAATCGGCGGACTAAAGAGCATAAAGAAGATTCAACTCTATAACAATCAAATCTCCGGTGAGTTGCCGGAGATCATCGGAAATTTGACTACTCTTTTTTCGCTGGACATCTCGCAGAATAGTCTCACCGGGAAATTGCCGGAGAAAATTGCTGCTCTCCCTCTTCAATATCTGCATCTCAGTGACAATTTCCTCGACGGCGAGGTCCCGGAGAGCTTAGCTTCTAACCCAAATCTTCTCAATTTGAAATTGTTTAACAATAGCTTTTACGGCGAACTTCCCCGGAATTTGGGTCTGAATACTTGTTTGAATGAGATTGATGTCTCTACCAACAATTTTGTGGGTGAAATTCCGAAATTTCTCTGCCATGGAAACCAACTTCAGAAAATCGTTTTATTCAACAACCGTCTCTCTGGAAATTTCCCAGAATCGTACGGTAGTTGCAATTCTCTGTATTATGTCAGAATTGAGAACAATCAACTTTCCGGGAAGGTACCGGACTCGTTCTGGAATCTCTCTAAGCTTACTAATATTCTGCTGGCGGAAAATCGATTTCAGGGCTCCATTCCTCCGGCGATAAGTGGCGTTCGTTTTCTCGAAGATTTGTTGATTTCCGGTAACAACTTCTCCGGCCAGTTACCGAAGGAGATGTGCAAATTGCGAGAGCTCGTCCGGTTAGACGTCAGCAGGAATAAATTCTCCGGCGGAGTTCCTTCCTGTATAACAGAGTTGCAGCATCTTCAGAAGCTCGACATGGAAGAAAACATGTTCACCGGAGAAATACCCAAATCGGTTTACACATGGAAAGAACTAACCGAGTTGAATCTGTCGCACAATCAATTCATCGGTGAGATTCCGCCTCAACTCGGCGATTTACCAGTTCTAAAGTACTTGGATCTCTCTGCAAATTCACTCTCCGGCGAAATCCCCGAGGAATTGACGAAGCTTAAACTGGGTCAGTTCAATGTCTCCAACAACAAATTAACCGGAAAAGTTCCTTCCGGCTTCGACAACGAACTATTTGTCAGTAGCTTAATGGGTAATCCGGGTCTGTGTAGCCCGGATTTGAAGCCGCTGAACCGGTGCCCCAAACCCAAATCCATAAGTTTTTATGTTGTCATTGTTTTGTCGCTTATCGCTTTCGTTCTCATCGGCTCTCTCATCTGGGTAATCAAATTCAAGATGAATCTCCTCAAGAAATCGAAATCCCCGTGGACGGTGACCAAGTTCCAACGTGTCGGGTTCGATGAAGAAGATGTAATTCCTCATCTAACCAAAGCAAATGTTATAGGGTCAGGCGGGTCAGGTACTGTCTTCAAGGTTGATCTAAAAATGGGTCAGACCATCGCAGTGAAGAACCTATGGGGTGGCCACAATAAATTGGATACAGAATTGGTTTTCCAGTCTGAAGTTGAGACATTGGGTCGAATCCGGCATGCCAATATTGTGAAGTTGCTCTTAAGTTGCAGCAATGGTGAAGGAAGTAGGATTCTTGTGTACGAGTACATGGAAAATGGTAGTTTGGGAGATGTCCTACACGAACACAAATCCGAAGCTTTGTCTGATTGGTCAAAACGATACAACATCGCCCTCGGAGCAGCCCAAGGATTAGCTTACTTGCACCATGACTGCGTCCCTCCGATAATCCATCGCGATGTGAAGAGCAACAACATTCTCTTGGATGGAGAATTTCAACCTCGGGTGGCTGACTTCGGTTTGGCAAAGTCAATTCAACGACAGGCAGAAGTAAATAATGGCAATGTCATGTCTCGCATTGCTGGCTCCTACGGTTACATTGCCCCTGAGTATGGATATACTATGAAGGTGACAGAGAAGAGCGATGTGTATAGCTTTGGAGTGGTGTTGATGGAGCTAGTGACAGGGAAGCGACCGAACGATGCATGTTTTAGGGAGAATGAAGATATTGTGAAATGGGTGACAAAGGCTGCTTTGTCCGAGGGAAAAGAAGAGAAAGGGTTGAGTTTGGATGAGATTATTGATGAAAAGTTGGATTCAAGGACATGTGAAGTAGAAGAGATAGTCAAGATTTTGGATGTGGCAGTGCTTTGTACTTCTGCATTGCCTCTCAACAGACCATCCATGAGGAGAGTGGTTGAGCTCATAAGGGACACCAAATTGTCTCATTCCAAGTCATGA 2973 44.47 MPFLNLPPSSPHLLFFIFYFFFFFFFFFFQFSVFALFSNHDYYILIRIKNTHLDDPKGCLNNWVPNQAHNPCNWTGITCDSTNSSVLSIDLNDSGVSGGFPFEFCRISSLKSLSISNCSVNGTLLSPSFSLCSHLQLLNLSSNLLVGNLPEFSAGFTQLKILDLSANNFTGDIPQSFGQLPALRVLRLSQNLLNGSLPSFLGNLSELTEMAIAYNNFKPNRLPPEIGNLKKLVNLFLPFSNFVGPIPDSIGNLTLLTNLDLSSNSISGPIPDSIGGLKSIKKIQLYNNQISGELPEIIGNLTTLFSLDISQNSLTGKLPEKIAALPLQYLHLSDNFLDGEVPESLASNPNLLNLKLFNNSFYGELPRNLGLNTCLNEIDVSTNNFVGEIPKFLCHGNQLQKIVLFNNRLSGNFPESYGSCNSLYYVRIENNQLSGKVPDSFWNLSKLTNILLAENRFQGSIPPAISGVRFLEDLLISGNNFSGQLPKEMCKLRELVRLDVSRNKFSGGVPSCITELQHLQKLDMEENMFTGEIPKSVYTWKELTELNLSHNQFIGEIPPQLGDLPVLKYLDLSANSLSGEIPEELTKLKLGQFNVSNNKLTGKVPSGFDNELFVSSLMGNPGLCSPDLKPLNRCPKPKSISFYVVIVLSLIAFVLIGSLIWVIKFKMNLLKKSKSPWTVTKFQRVGFDEEDVIPHLTKANVIGSGGSGTVFKVDLKMGQTIAVKNLWGGHNKLDTELVFQSEVETLGRIRHANIVKLLLSCSNGEGSRILVYEYMENGSLGDVLHEHKSEALSDWSKRYNIALGAAQGLAYLHHDCVPPIIHRDVKSNNILLDGEFQPRVADFGLAKSIQRQAEVNNGNVMSRIAGSYGYIAPEYGYTMKVTEKSDVYSFGVVLMELVTGKRPNDACFRENEDIVKWVTKAALSEGKEEKGLSLDEIIDEKLDSRTCEVEEIVKILDVAVLCTSALPLNRPSMRRVVELIRDTKLSHSKS 990
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12784637 12787692 - CePI673135_10g007840.1 Cec10g0784 213699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0784 990 FunFam Leucine-rich receptor-like protein kinase family protein 222 320 - -
Cec10g0784 990 SMART serkin_6 696 986 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0784 990 Gene3D Phosphorylase Kinase; domain 1 671 774 - -
Cec10g0784 990 SUPERFAMILY RNI-like 84 394 - -
Cec10g0784 990 ProSitePatterns Protein kinases ATP-binding region signature. 702 724 IPR017441 GO:0005524(InterPro)
Cec10g0784 990 ProSiteProfiles Leucine-rich repeat profile. 542 565 IPR001611 GO:0005515(InterPro)
Cec10g0784 990 FunFam Leucine-rich repeat receptor-like protein kinase 38 199 - -
Cec10g0784 990 Gene3D Ribonuclease Inhibitor 220 326 IPR032675 -
Cec10g0784 990 Pfam Leucine Rich Repeat 280 301 IPR001611 GO:0005515(InterPro)
Cec10g0784 990 Pfam Leucine Rich Repeat 256 277 IPR001611 GO:0005515(InterPro)
Cec10g0784 990 Pfam Leucine Rich Repeat 327 347 IPR001611 GO:0005515(InterPro)
Cec10g0784 990 Pfam Leucine Rich Repeat 471 492 IPR001611 GO:0005515(InterPro)
Cec10g0784 990 Pfam Leucine Rich Repeat 422 444 IPR001611 GO:0005515(InterPro)
Cec10g0784 990 Pfam Leucine rich repeat N-terminal domain 39 80 IPR013210 -
Cec10g0784 990 Gene3D Ribonuclease Inhibitor 327 641 IPR032675 -
Cec10g0784 990 ProSiteProfiles Protein kinase domain profile. 696 985 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0784 990 Gene3D Ribonuclease Inhibitor 38 219 IPR032675 -
Cec10g0784 990 SUPERFAMILY L domain-like 383 630 - -
Cec10g0784 990 Gene3D Transferase(Phosphotransferase) domain 1 775 990 - -
Cec10g0784 990 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 27 980 IPR050647 -
Cec10g0784 990 SMART LRR_typ_2 156 179 IPR003591 -
Cec10g0784 990 SMART LRR_typ_2 253 277 IPR003591 -
Cec10g0784 990 SMART LRR_typ_2 564 588 IPR003591 -
Cec10g0784 990 SMART LRR_typ_2 492 516 IPR003591 -
Cec10g0784 990 SMART LRR_typ_2 180 204 IPR003591 -
Cec10g0784 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g0784 990 Pfam Protein kinase domain 698 906 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0784 990 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515(InterPro)
Cec10g0784 990 Pfam Leucine rich repeat 542 600 IPR001611 GO:0005515(InterPro)
Cec10g0784 990 SUPERFAMILY Protein kinase-like (PK-like) 689 979 IPR011009 -
Cec10g0784 990 FunFam Leucine-rich repeat receptor-like protein kinase TDR 322 636 - -
Cec10g0784 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 775 990 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0616 Cec-Chr3:6581015 Cec10g0784 Cec-Chr10:12784637 1.80E-90 dispersed
Cec04g2035 Cec-Chr4:38457804 Cec10g0784 Cec-Chr10:12784637 6.60E-93 dispersed
Cec08g1244 Cec-Chr8:24384480 Cec10g0784 Cec-Chr10:12784637 2.10E-83 dispersed
Cec09g1668 Cec-Chr9:30698609 Cec10g0784 Cec-Chr10:12784637 3.10E-55 dispersed
Cec09g2253 Cec-Chr9:39393014 Cec10g0784 Cec-Chr10:12784637 2.20E-65 dispersed
Cec10g0784 Cec-Chr10:12784637 Cec11g1547 Cec-Chr11:29759261 2.00E-73 dispersed
Cec11g1566 Cec-Chr11:29951376 Cec10g0784 Cec-Chr10:12784637 3.30E-25 dispersed
Cec10g0784 Cec-Chr10:12784637 Cec10g0788 Cec-Chr10:12939079 1.80E-74 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72309 PF00069 Pkinase 1.70E-42 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0784 - - - 0.0