Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0788 ATGCAGCTTCTTCTCCTTCTCTTTCTCCTTCTTCACCTCCATCTTCATCTCTCCCTTTCTTCTCACTTGCCTGAATATCGCGCTCTTCTCTCTCTCAAGAGCTCGTTTTCCGATGCCTCCCAATTGCCGCTCTCCACTTGGGACGCGGCCACTGCCCACTGTACTTGGACCGGAGTCACCTGCGATTTCCGTCGCCACGTCGTCGGCCTCGACCTTGCAGGATTGAATCTCTCTGGTACTCTCTCTCCTGACCTGGGTTCTCTCCGGTTTCTCTCTAATCTCTCTCTCCCGTCCAATCAGATTTCCGGCCCCATTCCGCCGGAGATCTCTGCCATCTCTACGCTTAAATACCTTAACCTCTCCAACAATCTCATTAATGGTACATTGCCCTTGCAACTCTCCTTGCTCAACAATCTGGAGGTTCTTGATTTGTATAACAATAATATGTCTGGGAACTTGCCGCTTGTGGTCATACAGTTGCCAAATCTCCGCCATTTGCATCTCGGGGGGAACTTCTTCTCCGGTGTGATTCCGCCGGGGTATGGAATGTGGCAGTTCATGGAGTATTTGGCGGTGTCTGGAAATGAGCTTCAAGGTCCGATCCCGCCGGAGATTGGTAATCTGACGAAGCTTCGTGAACTTTACATTGGGTATTATAATACCTACGACGGCGGTTTGCCGCCGGAAATTGGAAACTTATCGGAACTGGTTCGATTGGATGCTGCTAACTGTGGGTTGACGGGTGAGATCCCTCGCGAACTTGGAAAACTTAAGAAATTGGATACTCTGTTTCTTCAGGTGAACGGCTTTTCTGGGCCTTTGATTCCAGAACTTGGGAGCTTAACGGGATTGAAATCCATGGATTTATCTAACAACATTCTTGTTGGTGAGATTCCGGAGTCATTCTCTCAACTGAAGAACTTGACGCTTTTGCATCTTTTCAGGAATAAGCTTCATGGAGCTATTCCACAGTTCATCGGTGAGTTGCAGGAGCTGGAAGTGTTGCAGTTGTGGGAAAATAACTTCACTGGTTCTATTCCTTATAGTTTGGGGAAGAATGGGAAGCTCGTTGTTCTCGACATTTCATCAAACAAGTTGACTGGAACTTTGCCTCCCGATATGTGCAATGGAAATAAACTTCAAACTCTGATAACCCTCGGTAATTTCTTGTTTGGTCCAATCCCTGAATCTCTTGGTAGATGCGAGTCGTTGAGCCGTATTCGAATGGGCGAGAATTTTCTCAATGGTTCCATCCCGAACGGTCTCTTCGGTTTGCCTAATCTTTCTCAAGTTGAGTTGCAGAACAATTTTCTCACCGGAGAATTTCCAGTCACTGATTCCGTCTCGGCAAATCTCGGCCAAATTAGTCTCTCAAACAATCGGCTCTCGGGATCCCTTCCGTCGATGGTTGGAAATTTCTCCGGCGTCCAGAAGCTTCTACTCGATGGGAACAAATTCTCCGGCCAAATCCCACCTGAAATCGGACGGTTACAGCAGCTGTCAAAGATTGATTTCAGCCACAACAAATTCTCCGGTCCAATCGCTCCGGAGATCAGCCAATGTAAGCTCTTAACCTTCGTCGATCTCAGTCGTAACGAACTCTCGGGTGAGATTCCGAATGAAATCACCACAATGAGGATATTGAACTATCTGAATCTCTCAAGAAATCACTTAATCGGAAGCGTTCCTGCTTCAATATCCTCAATGCAGAGCTTAACATCTGTTGATTTTTCATATAACAATCTCTCTGGTTTAGTTCCGGGGACGGGCCAGTTTAGCTACTTCAACTACACTTCATTTCTAGGCAACCCAAACCTCTGCGGTCCGTACTTAGGACCTTGCAAAAATGGGGTCGGCAATGGCACACAGCAGCCTCATTTAAAAGCCTCACTCTCTTCTTCTGTGAAACTTCTGCTTGTCATTGTCTTGCTCGTCTGCTCGATCGCATTTGCCATTGCAGCAATCATCAAAGCTCGGTCGCTAAAACGAGCAAGCGGGTCTCGAGCTTGGAAATTAACCGCATTCCAAAGACTAGATTTCACAGCAGATGACATTTTGGACTGTTTGAAAGAGGACAACATTATTGGGAAAGGAGGTGCTGGGATCGTTTACAAAGGTTTTATGCCGAGTGGCGATCACATCGCTGTGAAAAGACTGCCGGCGATGGGGCGAGGGTCGTCCCATGACCATGGATTCAATGCTGAGATACAGACTTTGGGGAGGATTAAACATCGTCACATTGTTAGATTATTGGGTTTCTGCTCAAACCATGAAACCAATCTTCTGGTTTATGAGTATATGCCTAATGGGAGTTTAGGGGAAGTTCTACACGGGAAGAAAGGTGGGCATTTGCAATGGGACACAAGGTATAAGATCGCCATTGAAGCTGCTAAAGGTCTTTGCTATTTACATCATGACTGTTCGCCATTGATTGTCCATCGAGATGTAAAATCAAACAACATTCTTCTGGATTCTGATTATGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTTCAGGATTCAGGCACATCAGAGTGTATGTCCGCCATAGCTGGTTCTTACGGATACATAGCTCCAGAATATGCCTATACATTGAGAGTAGACGAGAAGAGTGATGTTTATAGCTTTGGAGTAGTACTCTTAGAACTGGTGAGTGGGCGGAAGCCCGTCGGAGAATTTGGCGATGGGGTCGACATAGTTCAGTGGGTCAGGAAAATGACTAGTCCCAACAATGAAGGGGTAGCGAAAATCATTGATCCACGGCTCTCCTCAGTTCCGCTGAATGAAGTAACTCATGTATTCTATGTAGCAATGCTATGCGTGGAAGACCAAGCCGTGGAGAGGCCAACGATGAGAGAAGTAGTTCAAATCCTCACAGAACTCCCAAGGCCACCAACTTCAAAACAAATAAACTCAAAAGAAGCCGAAGTAACAACCCCGCCGCCGCTGCCATCGTCCCTGGTGGTGGCATTAGATTCACCGAACAAAGCACAGCCACCACCTGATCTTCTGAGCATTTGA 3027 46.65 MQLLLLLFLLLHLHLHLSLSSHLPEYRALLSLKSSFSDASQLPLSTWDAATAHCTWTGVTCDFRRHVVGLDLAGLNLSGTLSPDLGSLRFLSNLSLPSNQISGPIPPEISAISTLKYLNLSNNLINGTLPLQLSLLNNLEVLDLYNNNMSGNLPLVVIQLPNLRHLHLGGNFFSGVIPPGYGMWQFMEYLAVSGNELQGPIPPEIGNLTKLRELYIGYYNTYDGGLPPEIGNLSELVRLDAANCGLTGEIPRELGKLKKLDTLFLQVNGFSGPLIPELGSLTGLKSMDLSNNILVGEIPESFSQLKNLTLLHLFRNKLHGAIPQFIGELQELEVLQLWENNFTGSIPYSLGKNGKLVVLDISSNKLTGTLPPDMCNGNKLQTLITLGNFLFGPIPESLGRCESLSRIRMGENFLNGSIPNGLFGLPNLSQVELQNNFLTGEFPVTDSVSANLGQISLSNNRLSGSLPSMVGNFSGVQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSHNKFSGPIAPEISQCKLLTFVDLSRNELSGEIPNEITTMRILNYLNLSRNHLIGSVPASISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPNLCGPYLGPCKNGVGNGTQQPHLKASLSSSVKLLLVIVLLVCSIAFAIAAIIKARSLKRASGSRAWKLTAFQRLDFTADDILDCLKEDNIIGKGGAGIVYKGFMPSGDHIAVKRLPAMGRGSSHDHGFNAEIQTLGRIKHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSDYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTSPNNEGVAKIIDPRLSSVPLNEVTHVFYVAMLCVEDQAVERPTMREVVQILTELPRPPTSKQINSKEAEVTTPPPLPSSLVVALDSPNKAQPPPDLLSI 1008
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12939079 12942284 + CePI673135_10g007880.1 Cec10g0788 213703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0788 1008 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0788 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 82 325 - -
Cec10g0788 1008 Gene3D Phosphorylase Kinase; domain 1 657 766 - -
Cec10g0788 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 618 - -
Cec10g0788 1008 SUPERFAMILY RNI-like 225 587 - -
Cec10g0788 1008 Gene3D Ribonuclease Inhibitor 221 305 IPR032675 -
Cec10g0788 1008 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Cec10g0788 1008 Pfam Leucine Rich Repeat 236 257 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 Pfam Leucine Rich Repeat 451 472 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 Pfam Leucine Rich Repeat 284 305 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 Pfam Leucine Rich Repeat 162 180 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 Pfam Leucine Rich Repeat 138 155 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 Pfam Leucine Rich Repeat 332 352 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 Pfam Leucine Rich Repeat 355 376 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 Pfam Leucine Rich Repeat 500 521 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 Pfam Leucine Rich Repeat 524 544 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 Pfam Leucine Rich Repeat 477 497 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 Pfam Leucine Rich Repeat 115 134 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 Pfam Leucine Rich Repeat 548 569 IPR001611 GO:0005515(InterPro)
Cec10g0788 1008 MobiDBLite consensus disorder prediction 967 981 - -
Cec10g0788 1008 Gene3D Transferase(Phosphotransferase) domain 1 767 980 - -
Cec10g0788 1008 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 962 IPR050647 -
Cec10g0788 1008 Gene3D Ribonuclease Inhibitor 24 134 IPR032675 -
Cec10g0788 1008 Gene3D Ribonuclease Inhibitor 306 619 IPR032675 -
Cec10g0788 1008 Pfam Protein kinase domain 691 958 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0788 1008 SUPERFAMILY L domain-like 23 218 - -
Cec10g0788 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g0788 1008 MobiDBLite consensus disorder prediction 967 1008 - -
Cec10g0788 1008 SMART serkin_6 689 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g0788 1008 SUPERFAMILY Protein kinase-like (PK-like) 685 960 IPR011009 -
Cec10g0788 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 658 766 - -
Cec10g0788 1008 Gene3D Ribonuclease Inhibitor 135 220 IPR032675 -
Cec10g0788 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 767 977 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1495 Cec-Chr4:34461918 Cec10g0788 Cec-Chr10:12939079 8.50E-21 dispersed
Cec04g1496 Cec-Chr4:34477962 Cec10g0788 Cec-Chr10:12939079 4.50E-20 dispersed
Cec04g2314 Cec-Chr4:40710818 Cec10g0788 Cec-Chr10:12939079 2.30E-132 dispersed
Cec05g2000 Cec-Chr5:31995664 Cec10g0788 Cec-Chr10:12939079 8.30E-08 dispersed
Cec07g0172 Cec-Chr7:1791846 Cec10g0788 Cec-Chr10:12939079 6.80E-85 dispersed
Cec10g0685 Cec-Chr10:9530650 Cec10g0788 Cec-Chr10:12939079 1.60E-139 dispersed
Cec10g0788 Cec-Chr10:12939079 Cec11g1547 Cec-Chr11:29759261 1.40E-74 dispersed
Cec10g0784 Cec-Chr10:12784637 Cec10g0788 Cec-Chr10:12939079 1.80E-74 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72310 PF07714 PK_Tyr_Ser-Thr 2.10E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0788 - - - 0.0