Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0900 TCAAGTGACAGATCTGACTATAATAAAATCCGCGAATTGCTAGTGGTTGACAATAGTGAGTGGGATCAGTTGATAAAGCCTAGATGGGATGAGAGTGTTTCCCTTGAAAGCGCAAAAGAATTGCTGCTTCAAAGGCTACTTAAAGAGAAGCTACACGTATGGCTATTGCAAAAAGTCAGGGAAGGTGGGAGAGGCCCTAGCGTATTGGATGAGCAAGGTCAAGGCGTGATACATTTTGCTGCTGCACTTAACTATTATTGGGCCCTTCTACCAGCATTAGTTGCTGGTATAAATGTCAATTTTCGTGATGCAAATGGATGGACAGCACTACATTGGGCTGCATTCTTTGGCAGAGAGCGTACAGTCGCTGCCCTCATCTCTCTGGGTGCAGCTCCTGGAGCACTGGCAGATCCAAGCGTCAAGTATCCATCTGGCAGAACTCCTGCTGATTTAGCATCCTCAAATGGGCACAAAGGAATTGCTGGTTATCTTGCAGAGTCGGTGCTAAGCGCACACTTGGAATCTCTGAATTTTGATAATCAAGAAAGTAAGGCTGCAGATACTTGTGGAGAAAAAGCAGTACAAACAGCTGCTGAGCGTGTCCCCACTCCGCACGAGGGCAATGATATGTATACATTGTCCCTCAAGGATTCATTAGCAGCCATATCTAATGCTACCCAAGCTGCTGCTCGTATTCACGAGGTTATGAGGGTGCAGTCCTTCCAAAGAAAGCAATTGGAGGTGAACGATAAATTCGACGTTTCAAATGATCAGGCTTTTTCACTTTTACCAGTTAAGAGACGTAATCCGGGATCACATGATGATGAGCATGCTGCCGCCATTCGCATACAAAACAAGTTCCGCAGTTGGAAGGGCAGAAAAGATTTTCTAATAGGCCGACAGAGAATTGTTAAAATTCAG 921 45.17 SSDRSDYNKIRELLVVDNSEWDQLIKPRWDESVSLESAKELLLQRLLKEKLHVWLLQKVREGGRGPSVLDEQGQGVIHFAAALNYYWALLPALVAGINVNFRDANGWTALHWAAFFGRERTVAALISLGAAPGALADPSVKYPSGRTPADLASSNGHKGIAGYLAESVLSAHLESLNFDNQESKAADTCGEKAVQTAAERVPTPHEGNDMYTLSLKDSLAAISNATQAAARIHEVMRVQSFQRKQLEVNDKFDVSNDQAFSLLPVKRRNPGSHDDEHAAAIRIQNKFRSWKGRKDFLIGRQRIVKIQ 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19901642 19903317 - CePI673135_10g009000.1 Cec10g0900 213815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0900 307 Gene3D - 274 307 - -
Cec10g0900 307 Pfam Ankyrin repeats (3 copies) 77 167 IPR002110 GO:0005515(InterPro)
Cec10g0900 307 SUPERFAMILY Ankyrin repeat 57 166 IPR036770 -
Cec10g0900 307 SMART ANK_2a 144 173 IPR002110 GO:0005515(InterPro)
Cec10g0900 307 SMART ANK_2a 105 134 IPR002110 GO:0005515(InterPro)
Cec10g0900 307 Gene3D - 25 168 IPR036770 -
Cec10g0900 307 ProSiteProfiles Ankyrin repeat region circular profile. 105 130 - -
Cec10g0900 307 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 307 - GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)
Cec10g0900 307 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515(InterPro)
Cec10g0900 307 ProSiteProfiles IQ motif profile. 276 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0470 Cec-Chr6:5282011 Cec10g0900 Cec-Chr10:19901642 4.40E-43 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0900 K21596 - cit:102621892 374.785