Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0901 ATGAAACGATTTGCTAACAAGCAATCAACCTTATTTGATCATCAGAATCAGATCAATGGCATTGAAAATCAGTTGCTGTTAAGATGTGGAGAGATTAAGCGTTGGGAATCCGATCAATGCACCAACTATTCTCAATTTTCCTTCAAGCCAGTCGTCGGTAATTGCTTTGACTTTATTCTACTCAAATTCAGCTCGTCTTCAATCGAGCACCAGAACATGGCAGAAATAGATATTGAACGAATCCTTTTAGAAGCAAAACATCGATGGCTACGCCCGGCTGAAATATGTGAAATTCTCAAAAACTACGATAAATTTTCTATTGCTTCAGAGCCTGCTAATATGCCTCCAAGTGGTTCACTTTTTCTTTATGATCGAAAGGTGGTAAGATACTTCCGCAAGGATGGACATAATTGGAGGAAGAAGAAAGGAAAGGCGGTAAAGGAAGCTCGCGAGAGGCTCAAGGCTGGAAGTGTGTATGTGCTGAATTGCTACCATGCACATGGGGAAGAAAATGAAAATTTTCAGAGGCGCACTTATTGGATGCTGGAAGAGGATCTATCAAACATTGTTCTTGTCCACTATCGGGAAGTGCAGAGCAGTAGAGGAAATTTCAATCGTAATAGGGGGACTGATGAAGCTGCTCTATTCTCTCGAGAATTTGAAGATACTAAGAACCATCCAGAAATGGCCTCTAGTTTTCATCCATCTAATTATAAAATGCTTTCACAAACTGCTGAAATTAGCCTGAACAGTGCCCAGGTATCAGAATATGAAGATGCTGAATCAGAATACAGTAACCGAGAAAGTACTGTTTTCCATTCTTTTCTTGGATTACAACAGTTGAAAATGGAGAGTAATAGTGCTGATCTCTGTGATTCGAAGTATCCTATATCATTATCAGATATTTATCAAGAAGACTTTACAGCCTTTGGTGGGAATGGCTTTCCGACTACATCGGATAGAAGTAAATATAGCAATAGTGTTGGATTCATTTACGAGCCCCACAGAACACTTTGTTTCTCTTCTGAAAACGTCTTGGAAAGTGGTACTACTGGAATATATTCATCCTATCTGCAGCCATCATTTTTTACATCTCAACCTCAAATTTTAGACGATGTTCCAAAACAAGGTGATGAAATAGTGGGACTGCTCTCCTCTGATAAATGTAAAAGGACAGTGTTTAATAATCATCTACATTCCCAGGAAGATTGTCAGGAATTACTTGTGAAATCATCTGGCCAACGAGCCTCTGATCTACCCAGGAAGAATCTTGGAAAGGAAATAGTGGTCCCTACTGTCATGCCGGCTCCGGTCCAATCTTCTGAACCAATACAGGAAATAACCAGGCTGCTGAGAGTGATGTAG 1365 40.0 MKRFANKQSTLFDHQNQINGIENQLLLRCGEIKRWESDQCTNYSQFSFKPVVGNCFDFILLKFSSSSIEHQNMAEIDIERILLEAKHRWLRPAEICEILKNYDKFSIASEPANMPPSGSLFLYDRKVVRYFRKDGHNWRKKKGKAVKEARERLKAGSVYVLNCYHAHGEENENFQRRTYWMLEEDLSNIVLVHYREVQSSRGNFNRNRGTDEAALFSREFEDTKNHPEMASSFHPSNYKMLSQTAEISLNSAQVSEYEDAESEYSNRESTVFHSFLGLQQLKMESNSADLCDSKYPISLSDIYQEDFTAFGGNGFPTTSDRSKYSNSVGFIYEPHRTLCFSSENVLESGTTGIYSSYLQPSFFTSQPQILDDVPKQGDEIVGLLSSDKCKRTVFNNHLHSQEDCQELLVKSSGQRASDLPRKNLGKEIVVPTVMPAPVQSSEPIQEITRLLRVM 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19906580 19916169 - CePI673135_10g009010.1 Cec10g0901 213816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0901 454 ProSiteProfiles CG-1 DNA-binding domain profile. 78 203 IPR005559 GO:0003677(InterPro)
Cec10g0901 454 Pfam CG-1 domain 84 196 IPR005559 GO:0003677(InterPro)
Cec10g0901 454 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 77 393 - GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)
Cec10g0901 454 SMART CG_1_2 81 198 IPR005559 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g1671 Cec-Chr9:30867407 Cec10g0901 Cec-Chr10:19906580 1.20E-54 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0901 K21596 - cit:102621892 350.903