Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g0935 ATGGACTCCGTCTTCTCCGCCACGACGAGCAACATAGCCATTTGCTGCGTCTCGAAAGCCTTGAATCGGAGACTCTTCGAAATTGTTCGTAGAAGATGCGTTCACGGCGTTGACCGAGCTCGCCGTTTCAGCTGCATTTCCAGTTATCTTGACCTCTACGGAACTACTGGACTTTCTGGTTCTTCTTCACCGTCGCTCAGGACTCTTCAGGTTGTTTTGCCTTCACTGCGGCGTCCTTTGCGGTGTGTTTCGAGTTCCTCTGTATCTTTTGCATCTGGTGGCGGAAATGGCGGTCTTGGAGGGAAGAATGGTGGCGGAGGTCGTGGTGGAGATGGTGGGCTGGGCGGTGGAGATGGCAATAAGTTTGTTTCTGGTAGTGCTGAGGAGGTTTCTTCACTGTTGCCTAACGTTATCATACTCGATGTTGGAGGAATGACATGCGGGGGATGTGCCGCAAGTGTGAAGAGAATTCTAGAGAATCAGGCACAAGTATCATCTGCTAGTGTGAACCTCACAACAGAGACTGCAGTCATATGGCCAGTACCGGAGGTGAAAGATTCACCTCATAGGGTGAAGCAGCTGGGAGAGACGCTTGCTAATCATCTAACTCGATGTGGTTTTGCATCTAGTCTTCGAGAGTCAGGAAAAGATAACATCTTCATGGTTTTTGAAAGGAAGATGGAAGAAAAGCGCAATCGTTTAAAAGAGAGTGGTCGCAATCTTGTTTTTTCGTGGACTTTGTGTGCTGTGTGTCTTCTTGGTCACATTTCTCATTTCTTTGGTGCTAAGGCCTCATGGATCCATACATTTCATACTACTCAATTTCATCTATCATTGTGCTTATTTACATTACTTGGTCCTGGTCGTCAACTGATTATTGATGGTATGAAAAGTCTTGTCAAAGGAGCTCCAAATATGAACACTTTAGTTGGTCTTGGAGCCCTATCATCCTTTACTGTCAGCTCATTGGCTGCCTTAATGCCAAAACTTGGTTGGAAGGCTTTCTTTGAGGAACCAGTTATGTTAATAGCATTTGTATTGTTAGGAAGGAACCTTGAACAGAGAGCTAAAATTAGAGCTGCGAGTGATATGACAGGACTTCTTAGTATTTTGCCCTCAAAAGCTCGTCTAGTTGTTGATGGTGATACAGAATTGGGTTCAACAGTTGAAATTCCTTGTTCTAGTCTTTCAATTGGAGATGAAGTTATTGTACTTCCTGGGGACCGTATTCCTGCTGATGGAGTTGTGAAATCTGGTAGAAGCATTGTGGATGAGTCTAGTTTCACTGGGGAGCCATTACCTGTTACCAAGCTGCCTGGGAGCCAAGTTGCAGCAGGAACTATAAATCTTAATGGAACTCTTACAGTTGAGGTGCATCGACCAGGAGGTGAGACTGCTATGGGAGATATTATTCGTTTGGTAGAAGAGGCTCAAAGCCAGGAAGCTCCTGTTCAACAATTGGCTGACAAGGTGTCTGGGCACTTCACTTATGGAGTAATGGCACTCTCTGCAGCAACTTTTATCTTTTGGAGTCAATTTGGCTCACGCATTCTGCCTGCAGCTCTTTATCATGGAAGTTCAGTTTCATTGGCTCTGCAGCTTTCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGCTTAGCTACGCCGACTGCAATGCTGGTTGGAACTTCATTGGGTGCAACTAAAGGATTACTTCTGCGTGGTGGGAATATCTTAGAGCAGTTCTCAATGGTGGATACTGTTGTCTTTGACAAAACAGGGACCTTGACAGTTGGGAAACCTGTTGTGACGAAGGTGTTTGCGACTTCAAGAAATGAGAGAAATGCAGATTCACAGATAAACTCACACGGCAATTATTCAGAAAATGAGATTCTCAAGTTTGCTGCTGCAGTGGAATCTAACACAGTTCATCCAGTTGGAAAGGCAATTGTGGAAGCTGCTCGAGCTGTTAATGGTCAGGGTTTGAAGGTGGTTGACGGAACATTCGTTGAGGAACCTGGTTCTGGTGCTGTTGCAACAGTAGAAAACAGGATAATATCTGTAGGAACTTTGGACTGGGTTCAGAGGCATGGAGTCGTTGTTGATCATTTCCAAGAGATGGATGATCTCAAAGCTCAATCAGTCGTTCATGTAGGAGTAGACAATATTCTTGCTGGTTGTATTTATTATGAGGATGGCATCCGGGAGGATGCTAGTCATGTTGTTGACACCTTATCTAGGCAAGGAATTAACACATACATGTTGTCTGGGGACAAAAGGAGTAATGCTGAGTACATTGCATCTGTTGTTGGAATTCCAAAAGAGAAGGTACGATCTGGAGTCAAACCCCATGAAAAGAAGAAGTTTATTAGTGAACTTCAGGAGAACAACAACATTGTAGCCATGGTTGGAGATGGAATCAACGATGCTGCTGCCTTGGCTACTGCAGATATTGGAATTGCGATGGGTGGGGGTGTCGGAGCCGCCAGTGAGGTGTCTCCTATTGTGTTAATGGGTAACAGACTCTCTCAGCTGCTTGATGCTTTGGAGCTCAGCAGGTTAACCATGAAGACCGTGAAGCAAAATCTTTGGTGGGCTTTTGGATATAACATCGTCGGAATTCCAATTGCAGCAGGCATCTTGCTTCCTATTACTGGGACTATACTCACTCCTTCGATTGCGGGTGCCTTTATGGGTCTTAGTTCTGTAGGAAAAAAATTTTGCTCTTCAACTTCTTCTTTTCCGTCGAGTTCTAACGGTGTAAGGTGGAAATTGACAGTTAACCAACCTACCTGTCCGATCGTCACTACATTACACATGGAAGCATCCGGGTCACGAGCAAGAGCCGCTAAACATATATGGACGGATGAGGAGGATAGAATCCTTGTGGAGTGTTTGGTTCAGTGTGTGCAGTCTGGACACTGGCGAGCTGATAACGGAACTTTCCGACCTGGATTCCTATCAAACATATTACGGATGATGCAGCAGAAGATACCAGGGTGTTCCATACAGGTCAGCCCACATCTGGAGTCAAGGGTCAGGACGTTGAAGAGACAGTATAGCGCGATCGCTGAAATGTTGGGCCCAGGCTGTAGTGGGTTTGGGTGGAATACGGAGCGCAAATGTATTGACTGTGAGACGGATATATTTGACGCATGGGTCAAGAGTCATCCGAGTGCAAAAGGACTGCGCCATAAGTCATTTCCATACTATGATGACTTGGCCATCTGGCCTGTCATGAACGAGGACCTGGCAAGGCGTCGTCGTCGAGAACTATACGCCGAGCTGCAATCCATTCCTGTCACAAAATTAAAGGTGGACCGTGCGCAGTGTGTTAGGCATTCCCAACGTACTTCGTTTTCGTTTCACCTGAAAAAACAACCAATTTTCACTTTTCATTCACTGAATTCCAAGTTCAGCAATCGAAATCCAAACCCTTTTTTCCATTTTCCATTTTTCTTCAACCCCATAAGAATTCCCTCAAATCCCTTATCCCTTCTTTGTAGATTCATCCATTTCCTCTGCTTCATGGCCGAGGCTGAATTGGAGAGGGGCGACGCCAATTGCGGCCTTGCTTCCATGGATTCCTCCGAGTCCCGATGGGTTTTTCAGGATGAAGATCAATCGGAGATCGACGACGACGACGACGACGAGGATAATGCAACGCGCCATCGTATGGATTTGGAATCTGAGGATGAAGATAATGTTGAGCAGAAATTGATTCGGACTGGCCCACGTATTGATTCTTTCGATGTCGAAGCCCTTGACGTCCCTGGTGCCCATAGAAATGAATACGAGGACTTCAGCGTAGGAAAGAAAATTGCTCTTGCTTTTCAGACCCTTGGAGTCGTATTTGGTGATGTTGGGACAAGCCCTCTGTATACCTTCAGTGTCATGTTCAACAAAGTTCCTATTAATGGAGACGAAGATGTGATTGGGGCATTATCGCTAGTTATCTACACCTTAATCTTGATTTCACTAGTCAAGTATGTTCTTGTTGTTCTTCTGGCAAATGATGATGGTGAAGGTGGTACTTTTGCTTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTACTCCCGAATCAACTGCCTTCGGATACCCGAATATCAAGTTTTAGATTAAAGGTGCCATCAGCTGAATTGGAAAGATCACTAAAAATAAAGGAAAAACTTGAGGCTTCCCTGACCTTGAAGAAGCTTCTTTTGATGCTTGTTCTTGCTGGAACTGCTATGGTAATAGCCGATGGAGTTGTTACACCAGCAATGTCAGTAATGTCGGCTGTTGGTGGACTAAAGATTGCAGTGGATGCAATCAACCAAGATGAGGCTGTGATGATCTCAGTTGCCTGTCTTATAGTTCTGTTCAGTGTTCAGAAGTATGGCACTAGCAAAGTGGGGCTCGCTGTCGGTCCTGCATTATTTATATGGTTTTGTACACTTGCAGGCATTGGGATTTATAACCTTGTCATATATGATAGCAGTGTACTGAAGGCATTCAATCCTGTTCATATTTATTATTTCTTCAAGAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGTTGTCTTTTATGTGCTACAG 4576 44.93 MDSVFSATTSNIAICCVSKALNRRLFEIVRRRCVHGVDRARRFSCISSYLDLYGTTGLSGSSSPSLRTLQVVLPSLRRPLRCVSSSSVSFASGGGNGGLGGKNGGGGRGGDGGLGGGDGNKFVSGSAEEVSSLLPNVIILDVGGMTCGGCAASVKRILENQAQVSSASVNLTTETAVIWPVPEVKDSPHRVKQLGETLANHLTRCGFASSLRESGKDNIFMVFERKMEEKRNRLKESGRNLVFSWTLCAVCLLGHISHFFGAKASWIHTFHTTQFHLSLCLFTLLGPGRQLIIDGMKSLVKGAPNMNTLVGLGALSSFTVSSLAALMPKLGWKAFFEEPVMLIAFVLLGRNLEQRAKIRAASDMTGLLSILPSKARLVVDGDTELGSTVEIPCSSLSIGDEVIVLPGDRIPADGVVKSGRSIVDESSFTGEPLPVTKLPGSQVAAGTINLNGTLTVEVHRPGGETAMGDIIRLVEEAQSQEAPVQQLADKVSGHFTYGVMALSAATFIFWSQFGSRILPAALYHGSSVSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGATKGLLLRGGNILEQFSMVDTVVFDKTGTLTVGKPVVTKVFATSRNERNADSQINSHGNYSENEILKFAAAVESNTVHPVGKAIVEAARAVNGQGLKVVDGTFVEEPGSGAVATVENRIISVGTLDWVQRHGVVVDHFQEMDDLKAQSVVHVGVDNILAGCIYYEDGIREDASHVVDTLSRQGINTYMLSGDKRSNAEYIASVVGIPKEKVRSGVKPHEKKKFISELQENNNIVAMVGDGINDAAALATADIGIAMGGGVGAASEVSPIVLMGNRLSQLLDALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGILLPITGTILTPSIAGAFMGLSSVGKKFCSSTSSFPSSSNGVRWKLTVNQPTCPIVTTLHMEASGSRARAAKHIWTDEEDRILVECLVQCVQSGHWRADNGTFRPGFLSNILRMMQQKIPGCSIQVSPHLESRVRTLKRQYSAIAEMLGPGCSGFGWNTERKCIDCETDIFDAWVKSHPSAKGLRHKSFPYYDDLAIWPVMNEDLARRRRRELYAELQSIPVTKLKVDRAQCVRHSQRTSFSFHLKKQPIFTFHSLNSKFSNRNPNPFFHFPFFFNPIRIPSNPLSLLCRFIHFLCFMAEAELERGDANCGLASMDSSESRWVFQDEDQSEIDDDDDDEDNATRHRMDLESEDEDNVEQKLIRTGPRIDSFDVEALDVPGAHRNEYEDFSVGKKIALAFQTLGVVFGDVGTSPLYTFSVMFNKVPINGDEDVIGALSLVIYTLILISLVKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLEASLTLKKLLLMLVLAGTAMVIADGVVTPAMSVMSAVGGLKIAVDAINQDEAVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCTLAGIGIYNLVIYDSSVLKAFNPVHIYYFFKRNSTNAWYCLGGCLLCAT 1525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20610313 20651329 - CePI673135_10g009350.1 Cec10g0935 213850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g0935 1525 MobiDBLite consensus disorder prediction 1214 1233 - -
Cec10g0935 1525 ProSiteProfiles Heavy-metal-associated domain profile. 136 203 IPR006121 GO:0046872(InterPro)
Cec10g0935 1525 FunFam Copper-transporting ATPase PAA1 chloroplastic 596 730 - -
Cec10g0935 1525 Pfam E1-E2 ATPase 371 564 - -
Cec10g0935 1525 Gene3D - 137 210 - -
Cec10g0935 1525 Pfam Myb/SANT-like DNA-binding domain 950 1047 IPR024752 -
Cec10g0935 1525 NCBIfam heavy metal translocating P-type ATPase 306 899 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cec10g0935 1525 SFLD C1.7: P-type atpase like 568 849 - -
Cec10g0935 1525 CDD P-type_ATPase_HM 241 900 - -
Cec10g0935 1525 ProSitePatterns Heavy-metal-associated domain. 142 171 IPR017969 GO:0046872(InterPro)
Cec10g0935 1525 Gene3D - 576 849 IPR023214 -
Cec10g0935 1525 FunFam Copper-transporting ATPase 1, putative 357 478 - -
Cec10g0935 1525 SUPERFAMILY Calcium ATPase, transduction domain A 386 474 IPR008250 -
Cec10g0935 1525 SFLD p-type atpase 568 849 IPR044492 -
Cec10g0935 1525 SUPERFAMILY HAD-like 583 883 IPR036412 -
Cec10g0935 1525 SUPERFAMILY HMA, heavy metal-associated domain 137 185 IPR036163 GO:0046872(InterPro)
Cec10g0935 1525 CDD HMA 140 207 IPR006121 GO:0046872(InterPro)
Cec10g0935 1525 NCBIfam cadmium family heavy metal-translocating P-type ATPase 337 886 - -
Cec10g0935 1525 ProSitePatterns Hypothetical cof family signature 2. 799 821 - -
Cec10g0935 1525 PRINTS P-type cation-transporting ATPase superfamily signature 799 818 - -
Cec10g0935 1525 PRINTS P-type cation-transporting ATPase superfamily signature 744 754 - -
Cec10g0935 1525 PRINTS P-type cation-transporting ATPase superfamily signature 822 834 - -
Cec10g0935 1525 PRINTS P-type cation-transporting ATPase superfamily signature 585 599 - -
Cec10g0935 1525 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Cec10g0935 1525 Pfam Heavy-metal-associated domain 140 186 IPR006121 GO:0046872(InterPro)
Cec10g0935 1525 SUPERFAMILY Calcium ATPase, transmembrane domain M 342 874 IPR023298 -
Cec10g0935 1525 Gene3D - 357 478 - -
Cec10g0935 1525 ProSitePatterns E1-E2 ATPases phosphorylation site. 587 593 IPR018303 -
Cec10g0935 1525 NCBIfam copper-translocating P-type ATPase 288 899 - -
Cec10g0935 1525 NCBIfam HAD-IC family P-type ATPase 635 888 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec10g0935 1525 NCBIfam HAD-IC family P-type ATPase 344 607 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec10g0935 1525 Pfam haloacid dehalogenase-like hydrolase 581 813 - -
Cec10g0935 1525 FunFam Copper-transporting ATPase PAA1, chloroplastic 136 211 - -
Cec10g0935 1525 Pfam K+ potassium transporter integral membrane domain 1272 1525 IPR053951 -
Cec10g0935 1525 Gene3D - 596 730 IPR023299 GO:0000166(InterPro)
Cec10g0935 1525 MobiDBLite consensus disorder prediction 1199 1233 - -
Cec10g0935 1525 PRINTS H+-transporting ATPase (proton pump) signature 830 855 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec10g0935 1525 PRINTS H+-transporting ATPase (proton pump) signature 799 815 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec10g0935 1525 PANTHER ATP7, ISOFORM B 224 900 - GO:0005507(PANTHER)|GO:0016020(PANTHER)|GO:0043682(PANTHER)|GO:0055070(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1297 Cec-Chr2:29662631 Cec10g0935 Cec-Chr10:20610313 3.90E-95 dispersed
Cec03g0817 Cec-Chr3:9646802 Cec10g0935 Cec-Chr10:20610313 6.20E-86 dispersed
Cec05g1746 Cec-Chr5:29055431 Cec10g0935 Cec-Chr10:20610313 1.80E-169 dispersed
Cec06g1028 Cec-Chr6:15573502 Cec10g0935 Cec-Chr10:20610313 2.00E-20 dispersed
Cec06g1557 Cec-Chr6:29140392 Cec10g0935 Cec-Chr10:20610313 2.90E-58 dispersed
Cec09g0761 Cec-Chr9:6949043 Cec10g0935 Cec-Chr10:20610313 1.50E-20 dispersed
Cec09g1670 Cec-Chr9:30780158 Cec10g0935 Cec-Chr10:20610313 1.10E-23 dispersed
Cec10g0935 Cec-Chr10:20610313 Cec11g0040 Cec-Chr11:543709 1.30E-92 dispersed
Cec10g0935 Cec-Chr10:20610313 Cec03g1397 Cec-Chr3:31213631 8.30E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g0935 K17686 - csv:101214702 1526.53