Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g0939 | ATGGATAACTTATGCTGCTTCAATTCTGTCTATTCTCAGTTTGTAGGAGGACGTTCGTCATGTAGCTCTGGCAAGGGCAGGGGCAATTTATGCCCTGCCAGGTATGGCTTTAGCCTAGTAAAAGGCAAAGCAAATCATCCCATGGAGGACTATCATGTTGCTAAATTTATTACTGTGCATGGCCGGGAGCTAGGCCTTTTTGCTATATATGATGGACATTTAGGAGATAGCGTACCTGCCTATCTACAGAAGCATCTATTTCCTAATATACTGAAGGATGAGGAATTCTGGTCGAATCCCGGTAGCTCTATCTTTAAGGCGTACGAGAAGACAGACCAAGCAATACTCTCACACAGTCCTGACTTAGGAAGAGGTGGATCCACTGCTGTCACTGCAATTTTGATAAACGGTCAGAAATTATGGGTGGCTAATGTTGGAGATTCACGTGCAGTCCTTTCGAAAAAAGGGCAGGAGGTGCAAATGTCTATTGATCATGAGCCAAACACTGAGCGAGGAAGTATTGAGGACAGAGGTGGCTTTGTCTCTAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGCGACAAGAACCTCAAGACACACTTGCGATCTGATCCTGACATAACAAATGCCGATGTTGACTCTGACACTGAGCTTCTTATCTTAGCAAGTGATGGTCTATGGAAGGTCATGTCAAATCAAGAAGCCGTGGATATAGCAAGAAAAACCAAGGATCCCCAGAGAGCAGCAAAGCAATTAGCAGCAGAAGCACTGAAAAGGGAAAGCAAAGACGACATCTCAATCATCGTAGTTCGTTTCAAAGGGTTTTGGCCTTTAGGTCTCCATGGAACAGCTGCATGA | 885 | 44.97 | MDNLCCFNSVYSQFVGGRSSCSSGKGRGNLCPARYGFSLVKGKANHPMEDYHVAKFITVHGRELGLFAIYDGHLGDSVPAYLQKHLFPNILKDEEFWSNPGSSIFKAYEKTDQAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRAVLSKKGQEVQMSIDHEPNTERGSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDITNADVDSDTELLILASDGLWKVMSNQEAVDIARKTKDPQRAAKQLAAEALKRESKDDISIIVVRFKGFWPLGLHGTAA | 294 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 20774523 | 20778773 | + | CePI673135_10g009390.1 | Cec10g0939 | 213854 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g0939 | 294 | FunFam | Probable protein phosphatase 2C 39 | 26 | 282 | - | - | |
Cec10g0939 | 294 | SMART | PP2C_SIG_2 | 45 | 281 | IPR001932 | - | |
Cec10g0939 | 294 | SMART | PP2C_4 | 30 | 279 | IPR001932 | - | |
Cec10g0939 | 294 | PANTHER | PROTEIN PHOSPHATASE | 34 | 280 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cec10g0939 | 294 | Pfam | Protein phosphatase 2C | 43 | 274 | IPR001932 | - | |
Cec10g0939 | 294 | SUPERFAMILY | PP2C-like | 30 | 283 | IPR036457 | - | |
Cec10g0939 | 294 | CDD | PP2Cc | 34 | 281 | IPR001932 | - | |
Cec10g0939 | 294 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 281 | IPR001932 | - | |
Cec10g0939 | 294 | Gene3D | - | 30 | 284 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g0733 | Cec-Chr6:8502644 | Cec10g0939 | Cec-Chr10:20774523 | 5.90E-20 | dispersed | |
Cec09g0479 | Cec-Chr9:4063707 | Cec10g0939 | Cec-Chr10:20774523 | 6.80E-34 | dispersed | |
Cec10g0939 | Cec-Chr10:20774523 | Cec11g1838 | Cec-Chr11:32569232 | 2.00E-85 | dispersed | |
Cec10g0939 | Cec-Chr10:20774523 | Cec11g1465 | Cec-Chr11:28853053 | 3.20E-120 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g0939 | K17506 | - | csv:101214223 | 547.354 |