Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1075 ATGGCTAATCGGAGCTCCCAACAAGTATCCGATGCCATTCCCGACATGTCGTCATCCGACACAATCGTAAAAGAAGAAGAAGAAGAAGAAGAAGAAGTTGTTGCACTGTCGGTGTCGGAGAGGAAACTGTCATGGCAAAAGCTCCGACGATTCGACTCGTTGGATTTAGAGTCACGTAAACTCCATGGTCATGATGATCATCATCATTCCTATGCCAAGGAGAAGAAATGGAGTGTAATCTTACACTTAGCATTCCAAAGCATCGGCATAGTTTACGGCGACATCGGAACATCGCCGTTGTACGTGTTCTCGAGCACATTTCCAGATGGAATAAAGCACAACGATGATATTTTAGGGGCGTTGTCGTTGATCGTTTACACCATAACTTTGATTCCTGTAATCAATTATGTGTTTATTGTTTTGAGAGCAAACGACAACGGAGAAGGGGGAACCTTTGCATTGTACTCATTGATATGTCGATATGCAAAAGTGGGATTGATTCCGAATGCGGAGATTGAGGATCGGGAAGTGTCGAATTATCAATTAAGTTTGCCGAATGAAAGAGAGAAGAGAGCTTCAAGGATTCAATCAAAGCTAGAGAAAAGCCATTTTGCAAAGGTGTTTCTTCTATTTGCAACTATGCTTGGGACTTCCATGGTCATTGGAGATGGTGTTCTCACTCCTTGTATCTCAGTGTTATCTGCTGTGGGAGGGATCAAGGAGGCTACCCCTGCAATGACAGAAGGTAAGATTGTTTGGGCATCAGTAGGCATATTGGTGTGCCTATTCATGGTTCAAAGATTTGGAACAGACAAAGTTGGCTACACTTTTGCTCCAATTATCCTCACTTGGTTTGCTTTCAATGCTGGAATTGGTATCTACAACTTCATAAAATATGACCCAACTGTCATTAAAGCCTTAAATCCAAACTACATTTTTCAATACTTCCAAAGGAACAAAAAGGATGCTTGGATTTCTCTTGGTGGCATTGTTCTTGCCATTACAGGGACCGAAGCCTTGTTCGCCGACGTCGGGCATTTCAGCGTCCGATCGATCCAACTAAGCATGTCAGCAGTGACCTACCCAGCTCTAATATTTGCTTACATAGGCCAAGCTTCGTTTCTTCGCAAGCATGATGATCTAGTGTCGGACACATTCTACAAGTCAATTCCTGGAAGTTTGTATTGGCCAGTGTTTGTTGTGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATTTCAGGAACATTCTCAATAATTCAACAATCACTTTCACTTGGATGCTTCCCAAGAGTTAAAGTGGTTCATACATCAGCTAAGTATGAAGGGCAAGTTTATGTTCCTGAGATAAATTACCTTTTGATGTTGGCTTGTGTTGGTGTTACTTTGGGGTTCAAGAACACTACAAAGATTGGGAATGCATATGGAATAGCAGTGGTTTTTGTGATGACACTCACATCCTCTTTCTTAGTACTCGTTATGGTTATGATATGGAAAACTCATATCCTTTTCATAATCACTTACATTCTCATCATTGGTAGTGTGGAATTGGTGTATTTGAGTTCAGTCCTTTACAAGTTTGACCAAGGAGGCTATCTTCCTTTGGCTTTTGCAGCTGCTTTGATGACAATCATGTATGTGTGGAATAGTGTGTTTAGAAAGAAGTACTTTTATGAGCTCAATAACAAAATCTCTTCAGAAAAGCTCAACGAGATGGTGAATGCCACCAACTTTAGAAGAATTCCAGGCATTGCATTCTTCTACTCTGAGCTTGTTCAAGGCATCCCTCCCATCTTCAAGCATTACGTCGACCACATTCCTGCACTGCATTCTGTGCTCGTCTTCATCACCATTAAATCGCTTCCTGTGAGCAAGGTTTCGGCAGATGAACGTTTCCTCTTCCGACAAGTAGAGGCGAAGGAGATCGACGTGTTCCGTTGTGTTGTTCGATACGGGTACACGGATGTGCAGACAGAACAAGAATCGTTTGAGAAGATATTGATTGAAAGATTGGAAGAGTTCGAGAGAGAACGACGTAGATTGATTAAAGGGGCAAATAAAGTTGAAAATGAGAACGAAGATGAGAAAGGATTTGGAGGAATTGGAGAAGCATGGAAGGATGGAGTTGTTCATTTAGTTGGTGAAAGTGAAGTGGTTGCTGAAAAGGGGGCAAGCTTTGGGAAGAGAATGATGATAAACTATGCATATAGCTTCTTGAAGAGGAATTTGAGGCAAACTGATCAAGTATTTGATATTCCTCGCAAGCATATGCTCAAAGTAGGAATGACTTGTGAACTTTAG 2304 41.62 MANRSSQQVSDAIPDMSSSDTIVKEEEEEEEEVVALSVSERKLSWQKLRRFDSLDLESRKLHGHDDHHHSYAKEKKWSVILHLAFQSIGIVYGDIGTSPLYVFSSTFPDGIKHNDDILGALSLIVYTITLIPVINYVFIVLRANDNGEGGTFALYSLICRYAKVGLIPNAEIEDREVSNYQLSLPNEREKRASRIQSKLEKSHFAKVFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKEATPAMTEGKIVWASVGILVCLFMVQRFGTDKVGYTFAPIILTWFAFNAGIGIYNFIKYDPTVIKALNPNYIFQYFQRNKKDAWISLGGIVLAITGTEALFADVGHFSVRSIQLSMSAVTYPALIFAYIGQASFLRKHDDLVSDTFYKSIPGSLYWPVFVVAVSASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKYEGQVYVPEINYLLMLACVGVTLGFKNTTKIGNAYGIAVVFVMTLTSSFLVLVMVMIWKTHILFIITYILIIGSVELVYLSSVLYKFDQGGYLPLAFAAALMTIMYVWNSVFRKKYFYELNNKISSEKLNEMVNATNFRRIPGIAFFYSELVQGIPPIFKHYVDHIPALHSVLVFITIKSLPVSKVSADERFLFRQVEAKEIDVFRCVVRYGYTDVQTEQESFEKILIERLEEFERERRRLIKGANKVENENEDEKGFGGIGEAWKDGVVHLVGESEVVAEKGASFGKRMMINYAYSFLKRNLRQTDQVFDIPRKHMLKVGMTCEL 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 23827252 23833187 + CePI673135_10g010750.1 Cec10g1075 213990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1075 767 NCBIfam potassium uptake protein 83 766 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cec10g1075 767 MobiDBLite consensus disorder prediction 1 17 - -
Cec10g1075 767 Coils Coil 672 692 - -
Cec10g1075 767 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 65 766 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cec10g1075 767 MobiDBLite consensus disorder prediction 1 28 - -
Cec10g1075 767 Pfam K+ potassium transporter C-terminal domain 583 767 IPR053952 -
Cec10g1075 767 Pfam K+ potassium transporter integral membrane domain 83 570 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0591 Cec-Chr9:5110134 Cec10g1075 Cec-Chr10:23827252 1.60E-282 dispersed
Cec10g1075 Cec-Chr10:23827252 Cec10g1456 Cec-Chr10:28900416 2.00E-166 dispersed
Cec07g1326 Cec-Chr7:28854334 Cec10g1075 Cec-Chr10:23827252 8.10E-227 transposed
Cec11g0040 Cec-Chr11:543709 Cec10g1075 Cec-Chr10:23827252 6.70E-190 transposed
Cec10g1075 Cec-Chr10:23827252 Cec09g0590 Cec-Chr9:5088064 6.10E-288 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1075 K03549 - csv:101215797 1280.39