Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1162 ATGTCGGTGCCTGCGGCTTCCGTCACCGCAGGTATATTGGAACAGGTCTCTTACCGGTTTCCAAAACAGTTGATTTTATTGTGGTTTGTGATTTCCATAACCAATGCCGATGTCCCCGACGTACCACCAGCACCTTTGGTTGCACCTACTACTCGCAATATGCCTCTACCTGCAAAATTGCCTCTTCACCAACACCATCACCGAAAATATATGTCACCACAAAGTGCGCCAGAAGCTGGACTAGTGCCGTCATCTCCTCCTTACTATGGGCATCTTATCACTTCTGGTCACCCACCCACAAGTTCAAATTTTTCCAAACCACTGATGAAGAGTGGATCAGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCTCTGGCTTACCTCAGCCACCACTTTCCCCTATTGCAGCAGACTGTTGCAAACCTGACATGGTGTTAAAACGAGGAAGTGGTGATGACTGCCATTGTGTCTATCCCATAAAAATTGATCTCCTCCTCTTGAACGTATCACAGAATCCTAACTGGAAACTCTTTCTCGAAGAGTTAGCTTCTGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCGAGATTAAATATCTCAATGGACATTACTCCCCACGCTGGGATCAGCTTTTCTGCAGTCGATGCATCTGCAATAAACTCTTCACTTACAATGCATAAAGTTCGTCTGGACCCTACACTGGTTGGCGATTACCATCTTCTCAATATTACCTGGTTTAAGCCTCCACCTCCTTCTGAAGCTCCTCTAGCTTCTGCATCACCTGTAGCAGCTCCAGCATACCATTTTCCAGCCTCAACATCACTGAGTTCTCCTAGTAAAGGACACCATTCTAATCTGACACTTATTCTTGGTATTGGCGCTGGTTTTTTGTTCGTTGCCATTCTTTTTGTGTTGATAATTTGCTTATGCACATCTCATCGTGGGAAGACTGAAGCACCTCCATTAGTAACTGAAAAACGAAGGGTTGAGGACAAAGTGCCTGTGGCAGGAGTAGGATCTTTCCCTCATCCATCAAGTATGAGATTTCTAACTTATGAAGAGCTTAAAGAAGCAACTAATAACTTTGAAGCAGCCAGCATATTGGGGGAGGGCGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGACGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGCGACAAGGAATTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTACATCATCGAAATCTTGTTAAACTTGTTGGCTACTACAGTAATCGCGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCACGGTCCTTTGGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTGGATGCTGCCCGAGGGCTTGCTTACCTTCACGAAGACTCACAACCTTGTGTGATACACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCCAAAGTTGCCGACTTTGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGTGTGATGGGCACATTTGGATATGTCGCCCCTGAGTATGCAATGACGGGCCATCTACTTGTTAAAAGTGATGTTTATAGCTACGGAGTTGTACTTCTTGAGTTGCTCACCGGAAGGAAACCTGTAGATATGTCACAACCATCGGGACAAGAGAACCTGGTCACATGGGCGAGGCCGATTTTGAGAGACAAGGACCGGTTAGAAGAACTTGCTGATCCACGACTTGGAGGAAAGTATCCGAAGGAAGATTTTGTGCGGGTGTGTACCATTGCTGCAGCCTGCGTCGCTCCTGAGGCTGGCCAACGTCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTACAGCGCGTTACAGAATACCAAGACTCCATGGTACCATCCTCCAACAACCGAACCAATCTAAGACAGTCGTCCACAACTTTCGAGTCTGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCTGGTTTAAGTGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA 2178 45.73 MSVPAASVTAGILEQVSYRFPKQLILLWFVISITNADVPDVPPAPLVAPTTRNMPLPAKLPLHQHHHRKYMSPQSAPEAGLVPSSPPYYGHLITSGHPPTSSNFSKPLMKSGSAPPDGRLENIAPIQSSAGAIPSGLPQPPLSPIAADCCKPDMVLKRGSGDDCHCVYPIKIDLLLLNVSQNPNWKLFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHAGISFSAVDASAINSSLTMHKVRLDPTLVGDYHLLNITWFKPPPPSEAPLASASPVAAPAYHFPASTSLSSPSKGHHSNLTLILGIGAGFLFVAILFVLIICLCTSHRGKTEAPPLVTEKRRVEDKVPVAGVGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMVPSSNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25380428 25385121 - CePI673135_10g011620.1 Cec10g1162 214077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1162 725 ProSiteProfiles Protein kinase domain profile. 381 659 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1162 725 FunFam Receptor-like serine/threonine-protein kinase ALE2 361 458 - -
Cec10g1162 725 Gene3D Phosphorylase Kinase; domain 1 362 458 - -
Cec10g1162 725 SUPERFAMILY Protein kinase-like (PK-like) 359 658 IPR011009 -
Cec10g1162 725 FunFam Receptor-like serine/threonine-protein kinase ALE2 459 676 - -
Cec10g1162 725 Gene3D Transferase(Phosphotransferase) domain 1 459 681 - -
Cec10g1162 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1162 725 Pfam Protein tyrosine and serine/threonine kinase 384 656 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1162 725 CDD STKc_IRAK 387 657 - -
Cec10g1162 725 MobiDBLite consensus disorder prediction 666 707 - -
Cec10g1162 725 PANTHER OS01G0750732 PROTEIN 148 698 IPR050885 -
Cec10g1162 725 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0310 Cec-Chr7:3031882 Cec10g1162 Cec-Chr10:25380428 3.10E-86 dispersed
Cec08g1399 Cec-Chr8:25803059 Cec10g1162 Cec-Chr10:25380428 3.80E-72 dispersed
Cec09g0063 Cec-Chr9:541482 Cec10g1162 Cec-Chr10:25380428 2.60E-104 dispersed
Cec10g1162 Cec-Chr10:25380428 Cec10g2072 Cec-Chr10:35445360 3.30E-86 dispersed
Cec11g1886 Cec-Chr11:33090248 Cec10g1162 Cec-Chr10:25380428 2.80E-66 dispersed
Cec10g1162 Cec-Chr10:25380428 Cec07g0185 Cec-Chr7:1885302 5.00E-106 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72315 PF00069 Pkinase 6.10E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1162 - - - 0.0