Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1189 ATGAGCTGCTTTAGCTGCTGCGAGGAAGATGGAATTCAGAAAGCAGCTGACAATGGAGGCATGTATGCAGGAAAGCAAAATACAGGAAACAATGGGGGTTATCAAAAACCCGAAGCTGCACCAGCGGTCACTCAAGCTGTCAAAATGCAACCAATATTAGTGCCTACCATACCTGTCGAAGAACTGTCAGAAGTAACAGACAACTTTGGAAATGATGCTTTGATTGGAGAGGGTTCATATGGGAGAGTATACTATGGGATGCTTAAAAATGGGCAGCCTGCTGCGATCAAGAAGTTAGATGCCAGCAAACAGCCTGATGATGAGTTTTTAGCTCAGGTCTCCATGGTCTCAAGGCTGAAGCATGGAAATTTTGTTCAATTGCTTGGTTATTGCGTTGACGGGAGTTCCCGCATACTAGTATACGAGTATGCTTCCAATGGATCACTTCATGATATTCTTCATGGAAGAAAAGGAGTGAAAGGAGCACAACCAGGTCCCGTTCTATCATGGGCACAACGTGTGAAAATTGCTGTAGGGGCTGCTAGAGGACTCGAGTATTTGCATGAAAAGGCTGAGTCCCACATTATCCATCGTGATATTAAGTCCAGCAATGTACTCATCTTTGATGATGATGTTGCTAAAATTGCCGACTTTGATTTGTCCAATCAAGCTCCTGATATGGCAGCACGTCTTCACTCCACCCGTGTTCTTGGAACTTTTGGTTATCATGCTCCTGAATATGCTATGACTGGTCAATTGAACGCCAAGAGTGATGTATATAGCTTCGGCGTAGTCTTGCTTGAACTTTTGACAGGGAGAAAACCTGTAGATCCTACGCTACCACGAGGACAACAAAGTCTAGTTACTTGGGCTACACCAAAGCTGAGTGAAGATAAAGTTAAGCAGTGCGTTGATGCAAGGCTTGGCGGAGACTACCCCCCAAAGGCGGTAGCAAAGTTAGCAGCTGTTGCTGCCTTGTGTGTGCAGTATGAGGCAGATTTCCGGCCAAACATGAGCATTGTTGTCAAAGCCCTCCAGCATCTATTAAATGCCCGACCTGGGCCTTCTGGTGATGCATCAAACTCGTAA 1089 45.45 MSCFSCCEEDGIQKAADNGGMYAGKQNTGNNGGYQKPEAAPAVTQAVKMQPILVPTIPVEELSEVTDNFGNDALIGEGSYGRVYYGMLKNGQPAAIKKLDASKQPDDEFLAQVSMVSRLKHGNFVQLLGYCVDGSSRILVYEYASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAARGLEYLHEKAESHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDPTLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQHLLNARPGPSGDASNS 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25952497 25954774 + CePI673135_10g011890.1 Cec10g1189 214104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1189 362 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524(InterPro)
Cec10g1189 362 SMART serkin_6 69 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1189 362 Gene3D Transferase(Phosphotransferase) domain 1 144 354 - -
Cec10g1189 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1189 362 Gene3D Phosphorylase Kinase; domain 1 33 143 - -
Cec10g1189 362 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1189 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 3 351 IPR052101 -
Cec10g1189 362 FunFam pto-interacting protein 1 145 356 - -
Cec10g1189 362 SUPERFAMILY Protein kinase-like (PK-like) 50 345 IPR011009 -
Cec10g1189 362 FunFam PTI1-like tyrosine-protein kinase 3 33 143 - -
Cec10g1189 362 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1189 Cec-Chr10:25952497 Cec06g0192 Cec-Chr6:1975766 2.00E-71 dispersed
Cec08g0457 Cec-Chr8:13342397 Cec10g1189 Cec-Chr10:25952497 9.80E-137 transposed
Cec10g1782 Cec-Chr10:32547599 Cec10g1189 Cec-Chr10:25952497 1.00E-132 transposed
Cec10g1189 Cec-Chr10:25952497 Cec06g0424 Cec-Chr6:4794683 3.30E-58 wgd
Cec10g1189 Cec-Chr10:25952497 Cec09g0460 Cec-Chr9:3947058 4.90E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72317 PF07714 PK_Tyr_Ser-Thr 4.90E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1189 K13436 - csv:101223136 710.294