Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g1276 | ATGGAGTTGGGTTTGAGATTAGGAAATGATCCGCCATTTGTATTCCCTCAAAAACCTCCTTCGTCTTCTTCTTCTTCACACCCAACACCACTTGATTTTTCCCTCTCTTTTTCCTCCATTCTTCAACCTCCTCATGAACATCAAACCCACAATCACAATCACAAACACCATAACCACCTCCTTCCCCATTCTTTCAACTCTCCTCCGCCGCCCGCCGCCACTTCTCGCCGATCTTCTCAAACTGAAGGATCAGAAGGAGCAGGTGTTTTTACGGAGGTGATAAGTGGAGCGGCTGCGGCGGCGAATGGCGAGGGAGGAGAATTCGGAAGAGGCAACGGAATAGTTTTGTCAACATACAGAAACAGAAATGAAAGGGAAGAAAAAAGAGAGAATGAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGAAATTGGGTTGCAGAAAAAAACTGAGGCTTTCAAGACAGCAATCGGCTTTTCTTGAAGAAAGCTTCAAACAACACCATACACTTTACCCTAAGCAAAAGCTAGAAGTTGCAAGAAGACTGAATCTTCTTCCTCGTCAAGTAGAAGTTTGGTTTCAAAATAGACGAGCAAGAACGAAGCTGAAGCAAACGGAAGTAGAGTGCGAATACTTGAAGAAATGTTGCGCAACATTGACCCAACAAAACACAAAGCTTCAAAAGGAACTTCAAGATTTGAGAGCTTTAAAAACCACCCATTCTCTCTTCATGCACTCCCCCGCCACCACTCTCACCTTGTGCGCGTCTTGTGAACGCGCCGCCGCAACCCTCAACTTCCGTTGA | 828 | 44.69 | MELGLRLGNDPPFVFPQKPPSSSSSSHPTPLDFSLSFSSILQPPHEHQTHNHNHKHHNHLLPHSFNSPPPPAATSRRSSQTEGSEGAGVFTEVISGAAAAANGEGGEFGRGNGIVLSTYRNRNEREEKRENEEEEEDEEEEEEEEEEEEMKLGCRKKLRLSRQQSAFLEESFKQHHTLYPKQKLEVARRLNLLPRQVEVWFQNRRARTKLKQTEVECEYLKKCCATLTQQNTKLQKELQDLRALKTTHSLFMHSPATTLTLCASCERAAATLNFR | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 26893655 | 26896804 | - | CePI673135_10g012760.1 | Cec10g1276 | 214191 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g1276 | 275 | ProSitePatterns | 'Homeobox' domain signature. | 186 | 209 | IPR017970 | GO:0000981(InterPro)|GO:0006355(InterPro) | |
Cec10g1276 | 275 | ProSiteProfiles | 'Homeobox' domain profile. | 151 | 211 | IPR001356 | GO:0003677(InterPro) | |
Cec10g1276 | 275 | Pfam | Homeobox associated leucine zipper | 211 | 245 | IPR003106 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec10g1276 | 275 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 46 | 269 | IPR050762 | - | |
Cec10g1276 | 275 | SMART | HOX_1 | 153 | 215 | IPR001356 | GO:0003677(InterPro) | |
Cec10g1276 | 275 | MobiDBLite | consensus disorder prediction | 70 | 86 | - | - | |
Cec10g1276 | 275 | MobiDBLite | consensus disorder prediction | 19 | 46 | - | - | |
Cec10g1276 | 275 | Coils | Coil | 116 | 152 | - | - | |
Cec10g1276 | 275 | Gene3D | - | 159 | 209 | - | - | |
Cec10g1276 | 275 | CDD | homeodomain | 155 | 212 | IPR001356 | GO:0003677(InterPro) | |
Cec10g1276 | 275 | MobiDBLite | consensus disorder prediction | 1 | 86 | - | - | |
Cec10g1276 | 275 | SUPERFAMILY | Homeodomain-like | 153 | 220 | IPR009057 | - | |
Cec10g1276 | 275 | Pfam | Homeodomain | 155 | 209 | IPR001356 | GO:0003677(InterPro) | |
Cec10g1276 | 275 | Coils | Coil | 224 | 244 | - | - | |
Cec10g1276 | 275 | MobiDBLite | consensus disorder prediction | 122 | 150 | - | - | |
Cec10g1276 | 275 | MobiDBLite | consensus disorder prediction | 130 | 148 | - | - | |
Cec10g1276 | 275 | SMART | halz | 211 | 254 | IPR003106 | GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec10g1276 | Cec-Chr10:26893655 | Cec10g1777 | Cec-Chr10:32503119 | 7.80E-44 | dispersed | |
Cec10g1276 | Cec-Chr10:26893655 | Cec09g0378 | Cec-Chr9:3241315 | 1.70E-46 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30381 | PF00046 | Homeodomain | 1.00E-13 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g1276 | K09338 | - | csv:101208907 | 285.034 |