Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1289 ATGGGCATTGAAACAGTTCAGAATGACTTCATTTTCCGGTCAAAACTGCCGGATATCTACATCCCAAAGCACCTTCCTCTGCACTCCTACTGCCTACACGAAAACGCCGCCAAAATCGGCGACCGGACTTGTCTAATCAACGGGGTCACAGGCGAATCCTTCACCTACAACGACGTCGATCTGTCCGCACGCAAAGTCGCCGCCGGATTAAACAAGCTCGGCATTACAAAAGGCGATGTAATTATGCTCCTCCTCCCAAATTCGCCGGAATTCGTTTTCGCTTTCCTCGGCGCGTCATACCTCGGCGCAATTATGACGGCGGCGAATCCTTTCTTCACAGCAGCGGAAATCGCGAAGCAAGCAAAAGGATCAAAATCAAAATTAATCGTAACGCAATCGTCGTATTACGAAAAAGTAAAGGAAATAACAGAGGAATTAGCCGACGTTAAAATCATGACGGTCGATTCTCCATCAGAGGGTTGTTTATGGTTCGGCGATCTAATCAAAGCCGAGGAAGGAGATACTCCGAGGGTGGAAATCGACCCAGACGACGTCGTTGCGCTGCCGTATTCCTCTGGAACAACCGGATTACCGAAAGGCGTGATGCTTACACATAAAAGTTTGGTTACGAGTGTGGCTCAGCAAGTGGATGGAGAAAATCCGAATCTGTATTATGGAAATGAGGATGTGATTTTGTGTGTTTTGCCGTTGTTTCATATTTATTCGCTTAATTCGGTTTTGCTCTGTGGATTACGAGCCGGCGCTGCGATTTTGATTATGCCCAAATTTGAGATCGGTTTGCTTTTGCAATTGGTGGAGAAATACAGAGTGTCCATTGCGCCGATTGTGCCGCCCATTGTTTTGGCTATTGCCAAGTCGCCGGACCTTGAGAAGTATGATCTTTCGTCCATCAGAGTGATCAAATGCGGCGGCGCTCCGCTTGGGAAAGAGCTTGAAGATACCGTGAGAGCCAAGTTTCCTAAGGCCGTGCTCGGCCAGGGATACGGAATGACGGAGGCGGGTCCAGTCCTAACAATGGGATTAGCATTTGCAAAGGAGCCATTTCCGATGAAACCCGGCGCCTGTGGCACCGTCGTGAGAAACGCCGAGATGAAGATCGTCGACACCGAAACCGGCAGCTCATTGCCTCGAAACACGCCGGGAGAGATCTGCATCAGAGGCGATCAAATCATGAAAGGGTATCTGAACAATCCGGAGGAGACGGCGGCGACAATCGACAAGGACGGGTGGTTGCACACCGGTGACATCGGATTCATCGACGACGATGACGAGCTGTTCATCGTGGATCGGTTGAAGGAACTGATAAAGTACAAGGGATTTCAAGTGGCTCCGGCGGAACTTGAAGCTCTGTTGCTGACTCATCCGGTGATTTCGGATGCGGCCGTCGTACCAATGAGAGATGAACAAGCTGGAGAGGTTCCCGTTGCGTTCGTCGTGAAATTGAAGAATTCTGAAGTCACTGAGGATGAAATTAAACTATTTGTTTCAAAACAGGTGGTTTTCTACAAAAGAATCAACCGGGTATTTTTCATAGATGCAATTCCCAAATCGCCCTCAGGCAAGATCTTGAGGAAGGAGTTGAGGGCAAAATTGGCAGCTGCTTTTCCAAATTCTAATTAA 1641 48.63 MGIETVQNDFIFRSKLPDIYIPKHLPLHSYCLHENAAKIGDRTCLINGVTGESFTYNDVDLSARKVAAGLNKLGITKGDVIMLLLPNSPEFVFAFLGASYLGAIMTAANPFFTAAEIAKQAKGSKSKLIVTQSSYYEKVKEITEELADVKIMTVDSPSEGCLWFGDLIKAEEGDTPRVEIDPDDVVALPYSSGTTGLPKGVMLTHKSLVTSVAQQVDGENPNLYYGNEDVILCVLPLFHIYSLNSVLLCGLRAGAAILIMPKFEIGLLLQLVEKYRVSIAPIVPPIVLAIAKSPDLEKYDLSSIRVIKCGGAPLGKELEDTVRAKFPKAVLGQGYGMTEAGPVLTMGLAFAKEPFPMKPGACGTVVRNAEMKIVDTETGSSLPRNTPGEICIRGDQIMKGYLNNPEETAATIDKDGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPVISDAAVVPMRDEQAGEVPVAFVVKLKNSEVTEDEIKLFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKELRAKLAAAFPNSN 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27002219 27006655 - CePI673135_10g012890.1 Cec10g1289 214204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1289 546 Gene3D - 439 541 IPR045851 -
Cec10g1289 546 SUPERFAMILY Acetyl-CoA synthetase-like 18 540 - -
Cec10g1289 546 CDD 4CL 21 534 - -
Cec10g1289 546 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Cec10g1289 546 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Cec10g1289 546 FunFam 4-coumarate--CoA ligase 2 440 541 - -
Cec10g1289 546 Pfam AMP-binding enzyme 33 402 IPR000873 -
Cec10g1289 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 535 - GO:0016405(PANTHER)
Cec10g1289 546 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 439 - -
Cec10g1289 546 Gene3D - 5 438 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0781 Cec-Chr2:8944051 Cec10g1289 Cec-Chr10:27002219 1.40E-188 dispersed
Cec04g2225 Cec-Chr4:40013238 Cec10g1289 Cec-Chr10:27002219 3.50E-25 dispersed
Cec09g0357 Cec-Chr9:2991505 Cec10g1289 Cec-Chr10:27002219 4.40E-224 dispersed
Cec09g0358 Cec-Chr9:3002180 Cec10g1289 Cec-Chr10:27002219 2.80E-223 dispersed
Cec10g1289 Cec-Chr10:27002219 Cec11g1410 Cec-Chr11:28310849 1.80E-116 dispersed
Cec10g1289 Cec-Chr10:27002219 Cec06g1526 Cec-Chr6:28765352 2.90E-207 transposed
Cec10g1289 Cec-Chr10:27002219 Cec11g1308 Cec-Chr11:27128232 2.90E-207 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1289 K01904 - csv:101215427 996.112