Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1297 ATGGCGGATCTCAAAGAGCGGTTGCTTCCACCGAAACCTGCTTCTGCTGTTAATCTTAGGGAGGCAATTAATAATCGACCATCAGCCTCTGGCAGGGTACCTTTTCAAGGTGTGGATGTTCTAGGGCTGAAGAAGCGAGGGCAGGGACTTAGATCTTGGATCCGGGTAGATTCCTCTGGGAACTCCCAGATTATTGAGGTTGATAAGTTCACCATGATGCGTCGTTGTGATCTACCTGCACGTGATTTGCGGTTGCTTGATCCTTTGTTTGTTTACCCTTCAACAATTCTTGGTAGAGAGAAGGCTATTGTAGTCAATCTAGAGCAGATTCGTTGTATTATAACAGCTGATGAAGTTTTGCTGTTAAATTCCCTTGATAGTTATGTACTGCAGTATGTGGTAGAGCTACAAAGGCGATTGAAGACTACTGGGGTTGATGAGGTTTGGCAGAATGATGCAAATCATGGTGCTGACTTAAACCGAAGAAGGGGAAGTAGGAATTTTGATAATGTATTTGGAAACACGTCTCCTGATTATTTGCCCTTTGAGTTTAGAGCTTTAGAAGTTGCTTTGGAAGCAGCATGTACATTTCTTGATTCCCAGGCTGCAGAATTAGAAATCGAAGCATACCCATTGCTGGATGAACTTACGTCAAAAATCAGTACATTAAATTTGGAGCGGGTCCGTCGCTTGAAAAGCAGACTTGTTGCCCTGACTCGTAGGGTTCAGAAGGTTAGGGATGAAATAGAGCAGCTCATGGATGATGATGGAGATATGGCAGAAATGTACCTCACCGAGAAGAAAATGAGAATGGAGTCCTTTGTTTATGGTGATCAGTCTGTGAGTGGATACAGATCAATTGATGGAGCGTCTATTTCTGCTCCTGTTTCTCCTGTATCATCTCCACCCGAAACTCGCAGGCTTGAGAAGAGCCTGAGCATTGCCAGGAGCCGGCATGAGAGCATGAGAAGTTCAGAAAGTACCACTGAAAATATAGAGGAACTCGAGATGCTTCTTGAAGCATATTTTGTTGTCATTGATAGCACCCTGAATAAGTTGACATCGTTGAAAGAATACATTGATGATACAGAAGATTTCATCAACATCCAGTTGGATAATGTACGTAATCAGTTGATTCAGTTTGAGCTACTGCTGACTACCGCAACATTTGTTGTTGCCATTTTTGGGGTGGTAGCTGGAATTTTTGGCATGAATTTTGAAATACCAATGTTTGGGGATCCTGATGCATTCAAGTGGGTTCTTCTAATTACAGGAGTAAGTGGAATTGTCATATTTTCTGCATTTGTTTGGTTTTTCAGATACAAAAGGCTGATGCCACTTTAA 1344 42.34 MADLKERLLPPKPASAVNLREAINNRPSASGRVPFQGVDVLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLKTTGVDEVWQNDANHGADLNRRRGSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKMRMESFVYGDQSVSGYRSIDGASISAPVSPVSSPPETRRLEKSLSIARSRHESMRSSESTTENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFGDPDAFKWVLLITGVSGIVIFSAFVWFFRYKRLMPL 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27136508 27139723 + CePI673135_10g012970.1 Cec10g1297 214212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1297 447 CDD Mrs2_Mfm1p-like 53 444 IPR039204 -
Cec10g1297 447 FunFam Magnesium transporter MRS2-1 41 124 - -
Cec10g1297 447 Pfam Magnesium transporter MRS2-like 326 375 - -
Cec10g1297 447 Pfam Magnesium transporter MRS2-like 57 270 - -
Cec10g1297 447 Gene3D Magnesium transport protein CorA, transmembrane region 125 378 - -
Cec10g1297 447 Gene3D - 41 124 - -
Cec10g1297 447 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 384 437 IPR045863 -
Cec10g1297 447 Coils Coil 228 255 - -
Cec10g1297 447 Gene3D Magnesium transport protein CorA, transmembrane region 385 445 - -
Cec10g1297 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 35 444 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cec10g1297 447 FunFam Magnesium transporter MRS2-1 385 445 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0743 Cec-Chr2:8076644 Cec10g1297 Cec-Chr10:27136508 2.60E-90 dispersed
Cec07g0092 Cec-Chr7:953470 Cec10g1297 Cec-Chr10:27136508 1.30E-86 dispersed
Cec08g1072 Cec-Chr8:22578531 Cec10g1297 Cec-Chr10:27136508 1.20E-106 dispersed
Cec10g1297 Cec-Chr10:27136508 Cec06g0671 Cec-Chr6:7578908 2.90E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1297 K16075 - csv:101217419 825.083