Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1304 ATGGCGGGTGAGGCGGCACGACCGAGGAATGTTTTATTTGGGAAATACGAAATGGGTCGGCTATTGGGGAAAGGGACCTTTGCGAAGGTCTATTATGGAAGAAACTTGATGACCCACGAGAGTGTTGCCATTAAAGTTATCCTCAAGGACAGGGTGGAGAAAGAGGGGCTTCTTGAGCAAATCCGGCGAGAAATTTCTGTTATGGGGTTGGTTCGTCATCCCCATATTGTGGAATTGAAAGAAGTAATGGCGACGAAATCGAAGGTGTATTTTGTGATGGAGTATGTTAATGGGGGCGAACTGTTTGTGAAATTGTCTCAGCAAGGAAAATTGACTGAAGATGGAGCAAGAAAGTACTTTCAACAACTTATCTCAGCCGTGGACTTTTGCCACAGCCGTGGTGTCTCGCACCGTGATTTGAAGCCTGAAAATCTCCTTCTTGACGAGAATGGGAATTTGAAAGTCTCTGATTTTGGTCTCTCCGCCCTGCCGGAGCAGCTCCGGATCGACGGTTTGCTTCACACACGGTGTGGAACTCCGGCGTATGTGGCGCCTGAGGTACTCAGAAAGAAGGGTTATGACGGTGCTAAGGCGGATATTTGGTCTTGTGGGGTGATTTTGTTTGTGTTGCTTGCTGGGACTCTACCATTTCGAGCTGATAATGCGATGAAGTTGTATAGGAAGATTTTCAAGGCGGAGTTTGAATTTCCTCCATGGTTTTCTTCAGAAGCCAAGGAAATGGTATCTAAGCTTCTGGTTGTTGATCCTCAAAAGAGAGCTTCAATGGTTCAGATAATGCAGAGTCCTTGGTTTCAAAAGGGCTTCACAAAGCCAGTTTCATTCATTGAGAAAGATGAATTCAACGATGAATTCTCTGAATTGGCAAATCCCAAGTTGTTGTCCTCTTCTCCTCCTTTTTACAATGCCTTTGAGTTCATTTCCTCAATGTCCTCTGGTTTTGACTTGTCTAGTTTGTTTGAAAGCAAGAAGAAACAAGGCTCCATGTTCACTTCGAAATGCTCTGCTTCAGCCATTATAGCCAAGCTTCAGTCTCTGGCCGTGAAGCTCAACTTCAAGGCTACTAATCTGAAGGAGTTCAAGGTGAGGCTGCAGGCCAAGGAGGAAGGGAGGAAAGGGAAGTTGACGGTGACCGCAGAGGTTTATGAGGCGGCTCCGGAGCTGGCAGTGGTTGAGTTCTCAAAGTCGGCCGGCGACACTTTGGAGTACAATAAGTTCTGTGAGAAGGATGTGAGGCCTGCATTGAAAGACATAGTTTGGAGCTGGCAAGGAGAGAGTGAGTGCCTATAA 1308 46.41 MAGEAARPRNVLFGKYEMGRLLGKGTFAKVYYGRNLMTHESVAIKVILKDRVEKEGLLEQIRREISVMGLVRHPHIVELKEVMATKSKVYFVMEYVNGGELFVKLSQQGKLTEDGARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENGNLKVSDFGLSALPEQLRIDGLLHTRCGTPAYVAPEVLRKKGYDGAKADIWSCGVILFVLLAGTLPFRADNAMKLYRKIFKAEFEFPPWFSSEAKEMVSKLLVVDPQKRASMVQIMQSPWFQKGFTKPVSFIEKDEFNDEFSELANPKLLSSSPPFYNAFEFISSMSSGFDLSSLFESKKKQGSMFTSKCSASAIIAKLQSLAVKLNFKATNLKEFKVRLQAKEEGRKGKLTVTAEVYEAAPELAVVEFSKSAGDTLEYNKFCEKDVRPALKDIVWSWQGESECL 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27267368 27268675 + CePI673135_10g013040.1 Cec10g1304 214219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1304 435 ProSiteProfiles NAF domain profile. 302 327 IPR018451 GO:0007165(InterPro)
Cec10g1304 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1304 435 Gene3D Kinase associated domain 1, KA1 306 427 - -
Cec10g1304 435 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1304 435 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1304 435 CDD CIPK_C 308 422 - -
Cec10g1304 435 Pfam NAF domain 304 359 IPR004041 GO:0007165(InterPro)
Cec10g1304 435 SMART serkin_6 16 271 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1304 435 CDD STKc_SnRK3 15 270 - -
Cec10g1304 435 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 419 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cec10g1304 435 FunFam Non-specific serine/threonine protein kinase 9 299 - -
Cec10g1304 435 SUPERFAMILY Protein kinase-like (PK-like) 12 272 IPR011009 -
Cec10g1304 435 Gene3D Transferase(Phosphotransferase) domain 1 8 305 - -
Cec10g1304 435 FunFam Non-specific serine/threonine protein kinase 7 95 - -
Cec10g1304 435 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524(InterPro)
Cec10g1304 435 FunFam Non-specific serine/threonine protein kinase 302 426 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1412 Cec-Chr6:27645482 Cec10g1304 Cec-Chr10:27267368 1.30E-133 dispersed
Cec06g1617 Cec-Chr6:29763684 Cec10g1304 Cec-Chr10:27267368 7.60E-24 dispersed
Cec08g1221 Cec-Chr8:24123399 Cec10g1304 Cec-Chr10:27267368 6.80E-98 dispersed
Cec10g0217 Cec-Chr10:2393721 Cec10g1304 Cec-Chr10:27267368 4.30E-52 dispersed
Cec10g1304 Cec-Chr10:27267368 Cec11g0064 Cec-Chr11:790418 1.80E-66 dispersed
Cec11g1834 Cec-Chr11:32501675 Cec10g1304 Cec-Chr10:27267368 7.90E-30 dispersed
Cec10g1304 Cec-Chr10:27267368 Cec05g1809 Cec-Chr5:29949201 2.70E-176 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72322 PF00069 Pkinase 5.00E-77 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1304 - - - 0.0