Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec10g1305 | AGAGAGAAGTCTGAAAGAGTAAGCAAAGCGGGAGCTCTGACCACCAGCTTATCGAATCCACCATCGTCAAACCCCTTATCATATTCTGGATTAAGATTTCATTTCGTTTCAAAAAGAGAGGGGAAAAAGGAGAGGAACAATAAAATGGCTGCTGGAGGGTCTGGTTCTGGGCAGCCACAATTTATTTTGAGGGCTGGAGATGAGAGTTTTTCGCACGCGCCGTTGATCGAGAACCCGGAAACTGATCAGATTGTTGTTCCTGATAAGAAAAGCTGGAAGAACCTTTTTGCATACATGGGCCCGGGGTTTCTTGTTTCTATTGCATATATTGATCCTGGGAATTTTGAGGCTGATCTACAATCTGGAGCACAGTACAAGTATGGGTTGCTTTGGATCATATTAGTGGCTTCCTTTGCTGCCCTCATCATTCAGTCCTTAGCAGCCAATCTAGGGGTCGTTACAGGAAAACATTTAGCAGAGCACTGTAAAGCTGAGTACCCCAAGGCGCAAAATTTCGTCCTCTGGATCCTTGCTGAAATTGCAATTGTTGCATGTGATATTCCCGAAGTTATAGGAACTGCTTTTGCATTGAATATGCTCTTCAGCATTCCTGTCTGGTGTGGCGTTCTTCTGACAGGGCTTAGTACACTATTACTTCTTGCACTGCAGCAATATGGGATTAGAAAGCTTGAATTCTTGATTGCCTTTCTCGTATTGACAATTGCGATTTGCTTCTTCCTGGAGCTGGGCTATGCAAAGCCTGACGTTGGAGAAATTTTTTATGGGCTATTTGTCCCTCAATTGAAAGGAAGTGGTGCTACTGGTCTTGCAATTTCACTTCTTGGTGCTATGGTTATGCCACACAATCTGTTTCTTCATTCAGCACTGGTGCTCTCTAGGAAAATACCCCGATCCCTTTCTGGCATCAAGGAAGCTTGCAGATTTTACATGATAGAGAGTGGCTTTGCTCTTATGGTGGCCTTCCTCATTAATGTGTCAGTCATTTCAGTTAGTGGTGCAGTTTGCAATGCCCCAGATCTAAATAAGGAGGACCAAATGAGCTGCAATGATTTGGACTTGAATAAAGCTTCATTTTTATTGAGAAATGTATTGGGTAAATGGAGTTCAAAACTTTTTGCCATTGCTTTGTTGGCATCTGGTCAGAGTTCTACCATAACAGGAACCTATGCAGGACAGTATGTTATGCAGGGGTTTCTCGATTTGAAACTGACGCCATGGATCAGAAACTTTTTAACTCGAAGCTTAGCAATTGTTCCTAGTTTGATTGTTGCAATCATTGGTGGGTCTTCTGGGGCTGGGAAGCTGATCATTATTGCGTCGATGATTTTGTCATTTGAACTCCCTTTTGCTCTCGTTCCTCTTCTGAAGTTTACAAGCAGTAAGGCCAAGATGGGACCACATGTCAACTCTACTGCGATTACAGTATTGACATGGATTATTGGCTTCCTCATCATGGCTATAAATATATACTACCTCATGAGCCGTTTCATCCATATGCTCCTTCATAACGATCTACACCTCGCAGCAGTTGTCTTCATAGGGATACTTGGATTTTCAGGCATGGCACTATATTTAGCTGGAATTGCTTATCTGGTTTTAAGAAAGAGCAAGGAGATCACTCATCTCTTAGCACTAACAACAGATGAAAGTAGAAGACTGAGCAACGAGCCGAGTAAGACATCGGGATATAGTCTCCCGAACGAAGATATAGTAAGCATGCAGTTGCCTCAACGAGTTAGAACTGCCAATGATGTAAACTGA | 1782 | 42.76 | REKSERVSKAGALTTSLSNPPSSNPLSYSGLRFHFVSKREGKKERNNKMAAGGSGSGQPQFILRAGDESFSHAPLIENPETDQIVVPDKKSWKNLFAYMGPGFLVSIAYIDPGNFEADLQSGAQYKYGLLWIILVASFAALIIQSLAANLGVVTGKHLAEHCKAEYPKAQNFVLWILAEIAIVACDIPEVIGTAFALNMLFSIPVWCGVLLTGLSTLLLLALQQYGIRKLEFLIAFLVLTIAICFFLELGYAKPDVGEIFYGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSLSGIKEACRFYMIESGFALMVAFLINVSVISVSGAVCNAPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLKLTPWIRNFLTRSLAIVPSLIVAIIGGSSGAGKLIIIASMILSFELPFALVPLLKFTSSKAKMGPHVNSTAITVLTWIIGFLIMAINIYYLMSRFIHMLLHNDLHLAAVVFIGILGFSGMALYLAGIAYLVLRKSKEITHLLALTTDESRRLSNEPSKTSGYSLPNEDIVSMQLPQRVRTANDVN | 593 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 27285946 | 27291598 | + | CePI673135_10g013050.1 | Cec10g1305 | 214220 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec10g1305 | 593 | PRINTS | Natural resistance-associated macrophage protein signature | 415 | 432 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Cec10g1305 | 593 | PRINTS | Natural resistance-associated macrophage protein signature | 277 | 300 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Cec10g1305 | 593 | PRINTS | Natural resistance-associated macrophage protein signature | 202 | 221 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Cec10g1305 | 593 | PRINTS | Natural resistance-associated macrophage protein signature | 227 | 248 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Cec10g1305 | 593 | PRINTS | Natural resistance-associated macrophage protein signature | 174 | 200 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Cec10g1305 | 593 | PRINTS | Natural resistance-associated macrophage protein signature | 387 | 406 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Cec10g1305 | 593 | PRINTS | Natural resistance-associated macrophage protein signature | 447 | 466 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Cec10g1305 | 593 | NCBIfam | Nramp family divalent metal transporter | 100 | 468 | - | - | |
| Cec10g1305 | 593 | Hamap | Divalent metal cation transporter MntH [mntH]. | 80 | 503 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Cec10g1305 | 593 | MobiDBLite | consensus disorder prediction | 9 | 30 | - | - | |
| Cec10g1305 | 593 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
| Cec10g1305 | 593 | Pfam | Natural resistance-associated macrophage protein-like | 116 | 477 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Cec10g1305 | 593 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 80 | 547 | IPR001046 | GO:0005384(PANTHER)|GO:0015086(PANTHER)|GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Cec10g1305 | 593 | NCBIfam | metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family | 94 | 471 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g0860 | Cec-Chr2:10602834 | Cec10g1305 | Cec-Chr10:27285946 | 7.80E-90 | dispersed | |
| Cec08g0618 | Cec-Chr8:17703809 | Cec10g1305 | Cec-Chr10:27285946 | 1.30E-167 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec10g1305 | K21398 | - | csv:101209649 | 999.579 |