Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1307 ATGCCGATCGATACCTCTGCAGTTTCCGGCCAAATTGTTTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCATGGCTTGTAAAGTTTCTTCTTGAGAAGGGCTACACTGTTAGAGGAACCGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAACAACTTAGAAGGAGCTAAAGAGCGGTTGTCTTTGTTTAGTGCTGATCTTCTTGATTTTGACAGTCTCAAAGCAGCTACTATGGGTTGCCATGGTGTTTTCCACACCGCGTCTCCGGTGACCGATGATCCCGAAAAGGTGGAACAGGCCATAATCGGAACAAAGAATGTCATGACCGCGGCTGCTGAAGCAAATGTTCGACGAGTGGTGTTCACGTCGTCGATCGGCTCCATCTACATGAACCCTAACCGAAGCCCCGACGTGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAATGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAAAGGAGTGGATCTTGTGGTGGTAAATCCAATGTTAGTATTGGGGCCATTGTTGCAAGAAAGTGTGAATGCAAGTGTGGTTCATATAATGAAATATTTAACAGGATCAGCAAAAACATATGTAAATGCAGTTCAAGGTTATGTTGATGTCAAGGATGTTGCAAAAGCCCATGTTTTGGTTTATGAAACTCCTTCGGCTTCAGGAAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTGCAAGCTTGTTCCCTCAATATCCTCTCCCTACCAAGTAA 828 44.44 MPIDTSAVSGQIVCVTGAGGFIASWLVKFLLEKGYTVRGTVRNPDDQKNAHLNNLEGAKERLSLFSADLLDFDSLKAATMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSSIGSIYMNPNRSPDVVVDESCWSDLEFCKNTKNWYCYAKTMAEQAAWEVAKEKGVDLVVVNPMLVLGPLLQESVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDILASLFPQYPLPTK 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27303628 27304859 - CePI673135_10g013070.1 Cec10g1307 214222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1307 275 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 273 IPR036291 -
Cec10g1307 275 FunFam Cinnamoyl-CoA reductase 1 6 275 - -
Cec10g1307 275 CDD FR_SDR_e 13 275 - -
Cec10g1307 275 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 268 IPR050425 GO:0016616(PANTHER)
Cec10g1307 275 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Cec10g1307 275 Gene3D - 3 275 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1307 Cec-Chr10:27303628 Cec10g1309 Cec-Chr10:27325638 1.40E-133 dispersed
Cec10g1307 Cec-Chr10:27303628 Cec10g1308 Cec-Chr10:27307948 3.90E-152 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1307 K09753 - csv:116401668 513.072