Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1308 ATGCCGATTGATACCTCTGCAATCTCCGGCCAAATTGTGTGTGTCACCGGCGCCGGCGGCTTCATTGCTTCATGGCTTGTAAAGCTTCTTCTTGAGAAAGGCTACACTGTTAGAGGAACCGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAACAACTTAGAAGGAGCTAAAGAGCGGTTGTCTTTGTTTAGTGCTGATCTTCTTGATTTTGACAGCCTCAAGGCAGCCATTATGGGTTGTCATGGTGTTTTCCACACTGCGTCTCCGGTGACCGATGATCCCGAAAAGGTGGAACAGGCCATAATCGGAACAAAGAACGTCATGACCGCTGCCGCTGAAGCAAACGTCCGACGAGTGGTGTTCACGTCATCGATCGGCACCGTCTATATGAACCCTAACCGAAGCCCGGACGCGGTAGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTACTGCTATGCAAAGACAATGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAGAGGAGTGGATCTTGTAGTTGTAAATCCAATGCTGGTGTTGGGACCTTTGTTGCAAGAAGGTGTGAATGCTAGTGTAGTTCACATAATGAAGTATTTAACGGGATCAGCAAAAACATATGTAAATGCAGTTCAAGGTTATGTTGATGTTAAGGATGTTGCAAAAGCCCACGTTTTGATTTATGAAACTCCTTCCGCTTCAGGAAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTAAAAACTTCTTCCCTCAATATCCTCTTCCTACCAAGTGTTCTGATGAGATAAATCCCAGAAAGAAACCTTACAAGTACACAGTTGAGAAGCTAAAGTCATTAGGAATGGAATTTACACCAATCAAGCAATGCATATATGAAACTGTAAAGAGCCTACAAGACAAGGGTCATCTTCCACTTCCTTCCCAACTTCAACATTGA 990 43.74 MPIDTSAISGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLNNLEGAKERLSLFSADLLDFDSLKAAIMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSSIGTVYMNPNRSPDAVVDESCWSDLEFCKNTKNWYCYAKTMAEQAAWEVAKERGVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLIYETPSASGRYICVESMLHRGELVDILKNFFPQYPLPTKCSDEINPRKKPYKYTVEKLKSLGMEFTPIKQCIYETVKSLQDKGHLPLPSQLQH 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27307948 27314698 - CePI673135_10g013080.1 Cec10g1308 214223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1308 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 IPR050425 GO:0016616(PANTHER)
Cec10g1308 329 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Cec10g1308 329 CDD FR_SDR_e 13 298 - -
Cec10g1308 329 FunFam Cinnamoyl-CoA reductase 1 4 329 - -
Cec10g1308 329 Gene3D - 3 329 - -
Cec10g1308 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 315 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0328 Cec-Chr9:2728873 Cec10g1308 Cec-Chr10:27307948 2.10E-147 dispersed
Cec10g0741 Cec-Chr10:10985064 Cec10g1308 Cec-Chr10:27307948 5.20E-63 dispersed
Cec10g1308 Cec-Chr10:27307948 Cec11g1947 Cec-Chr11:33555633 1.50E-54 dispersed
Cec10g1307 Cec-Chr10:27303628 Cec10g1308 Cec-Chr10:27307948 3.90E-152 tandem
Cec10g1308 Cec-Chr10:27307948 Cec10g1309 Cec-Chr10:27325638 2.30E-159 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1308 K09753 - csv:116401668 628.632