Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1309 ATGCCCCTTGCAGCCGCCGTAGCTTCCGGTCAAGTTGTTTGTGTCACCGGCGCCGGTGGCTTCATTGCCTCTTGGCTTGTGAAGCTTCTTCTTCAAAAGGGTTACACTGTTAGAGGCACTGTAAGAAACCCAGATGATCGGAAGAATGATCATTTGAAAGAGTTAGATGGAGCTGAGGAAAGGTTGACGCTCTACGGTGCTGATCTACTTGATTTCGACAGTCTTCAAGCCGCCATTATCGGTTGCGATGGTGTTTTCCACACGGCGTCTCCGGTGACTGACGACCCCGAAAAGGTGGAGCAGGCAATAATTGGGACGAAAAATGTTATAATGGCGGCGGCGGAGGCCAAGGTCCGGCGAGTGGTGTTCACATCGTCCATTGGAACTATACACATGAACCCTAATCGGAGCCCCGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAAAATACAAAGAACTGGTATTGTTATGCAAAAACAGTGGCAGAGCAAACAGCATGGGCAATGGCAGAGGAGAAAGGGGTGGATTTAGTTGTGGTGAATCCAATGTTGGTGCTTGGACCATTATTACAACAAACAATCAATGCAAGTGTAGCTCATATAATGAAGTACTTGACTGGCTCAGTCAAGACATACGTCAATGCAGTTCAAGGATACGTTCATGTTAAGGATGTTGCAAAAGCTCACTTGTTGGTGTATGAGACTCCCTCTGCATTTGGTAGATATATTTGTGTTGAAACTATGCTTCATCGTGGAGAATTGGTTGAAATTTTGGCTAAATTCTTTCCTGAGTATCCCATTCCTACCAAGTGCTCTGACCAGGTGAACCCTAAGAAGAAACCTTACAAATTTAGTGTAAAAAAGCTGAAGGACTTGGGGATGGATCAATTCATACCTGTGAAGCAATGCATATATGAAACTGTGAAGAGCCTTCAAGAGAAGGGTCATCTTCCACTTCCTTAA 978 45.4 MPLAAAVASGQVVCVTGAGGFIASWLVKLLLQKGYTVRGTVRNPDDRKNDHLKELDGAEERLTLYGADLLDFDSLQAAIIGCDGVFHTASPVTDDPEKVEQAIIGTKNVIMAAAEAKVRRVVFTSSIGTIHMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTVAEQTAWAMAEEKGVDLVVVNPMLVLGPLLQQTINASVAHIMKYLTGSVKTYVNAVQGYVHVKDVAKAHLLVYETPSAFGRYICVETMLHRGELVEILAKFFPEYPIPTKCSDQVNPKKKPYKFSVKKLKDLGMDQFIPVKQCIYETVKSLQEKGHLPLP 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27325638 27332459 - CePI673135_10g013090.1 Cec10g1309 214224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1309 325 FunFam Cinnamoyl-CoA reductase 1 4 325 - -
Cec10g1309 325 Gene3D - 4 325 - -
Cec10g1309 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 IPR050425 GO:0016616(PANTHER)
Cec10g1309 325 CDD FR_SDR_e 13 298 - -
Cec10g1309 325 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
Cec10g1309 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 317 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2498 Cec-Chr5:36022520 Cec10g1309 Cec-Chr10:27325638 5.60E-62 dispersed
Cec06g0043 Cec-Chr6:433011 Cec10g1309 Cec-Chr10:27325638 1.10E-47 dispersed
Cec06g0044 Cec-Chr6:437990 Cec10g1309 Cec-Chr10:27325638 2.30E-50 dispersed
Cec10g1307 Cec-Chr10:27303628 Cec10g1309 Cec-Chr10:27325638 1.40E-133 dispersed
Cec10g1309 Cec-Chr10:27325638 Cec11g1947 Cec-Chr11:33555633 7.50E-54 dispersed
Cec10g1308 Cec-Chr10:27307948 Cec10g1309 Cec-Chr10:27325638 2.30E-159 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1309 K09753 - csv:101219069 616.305