Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1331 ATGGGGGCGATTTTGGCGGTTTCAGTCGTTCAAACGCTGCTATTTTTGGCTTTCTTCTACTTGGCGGCTTCCTATACTGATTCCCACGATTCGTCGGTTCTTCAATCCTTGAAAGATGGATGGCAAAATACACCACCAAGCTGGGGAACAACAAATGATCCATGTGGAGCTCCCTGGGAAGGAGTGATTTGCAAGAATTCAAGAGTAGTTGCATTGAAATTATCAAGTATGGGCCTAAAAGGTAAACTTGGTGGTGACATTGGAGGCCTTACTGAACTGAGATCATTGGACCTTGCAGCCAATCGAGACCTCATTGGTTCAATCTCTTCAGCTCTAGGGAGTTTATTGAAATTAGAGACGTTGATCCTTTCGACGTGTGGATTTAGTGGCAATATTCCGGAAGAATTGGGCAATCTTACTGAGTTAACCTTCTTGTCTTTATATTCCAACAACTTCACTGGTACTATACCGGCAACTCTGGGAAAACTCTCCAATCTATACTGGCTAGACCTGGCAGATAATCAGTTGACTGGTGCTCTCCCAGTTTCCACTTCCGGATCTTCGGGTTTAGATCAACTTTTTAAGGCTAAACATTTTCATTTCAGCAAAAACCAGTTATCAGGTACCATTCCACCTGAACTTTTTCGCTCTGAGATGGTATTATTACACATATTATTTGATGGAAATAATTTTTCTGGGAGTATCCCACCAACATTGGGACTTGTTAAGACCCTTGAGGTTCTTCGACTTGATCGAAATTCTTTAACAGGAAATGTCCCATCCACTCTAAGCAACCTAATAAATGTGAATGAATTGCATTTAGCCAACAATAAGCTGACAGGTCCACTACCAAACTTAACTCAAATGAGTTCACTAAATTACGTGGATCTTAGTAACAACTCATTTAGCTCATCAATAGCTCCGGAATGGTTCTCAAATCTACAATCTCTCACCACTCTTATTGTTGAATATGGATCAATACGGGGTAATCTGCCAGAAGGAATCTTTAGCTTACCACGTATACAACAAGTAAAACTGAAGAATAATGCATTTAGTGGGACATTATATATGGGTGACAGCATTGGCCAACTGTTGCAGCTAGTCGATTTGCAAAATAACAATATTTCCTCAGTTACCTCTTCGGGATATACTAACGCTTTGATGCTGACAGGAAATCCTGTGTGTGATGCAAATTTCCTCTCAAATACAAACTATTGCCAGCTTCAACAGCAACAAGCAAAACCTTATACTACCAGCCTTGTCAACTGTGGCAGTAAGTCATGTCCTTCTGATGAGAAGCTGAACCCTCGGAGTTGTGAGTGTGCCTATCCATATGAAGGGACTTTATACTTTAGAGGACCCTCTTTCCGGGAATTGTCCAATATAACTCTGTTTCACTTATTGGAAATGAGCCTTTTGGAAAAATTCAACCGAACGGTTTCTATTCGAAACCCTTTCTTTAATGCTGATGATTATCTTCAGATACAGCTTGCACTTTTTCCAGCCAATGATAAGTATTTCAACAGGGAAGACATTCAGTGGATTGGTTTTGATTTGCACAGTCAAAATTACAAACCTCCCGACAAGTTTGGGCCATATTACTTCTTTGCGTCTCCTTATCCTTTTTCAGACATCGATGAGGGATCAACTTCAACCAACACTGGGGTGATAATTGGAATAGCTGTTGGCTGTGCCTTGCTTGTTCTCTGCCTCATTGGAATTGGAACATATGCAATTCAACAAAAGAGACGTGCAGAAAAGGCCAAGCCAAATGCTTTCTGGGTGCCAAGTGGAAACGATAGCGGAAGCGCACCACAATTAAAGGGAGCCAGATGGTTTTCTTATGATGAACTTAAAAAATGCACAGATAATTTCTCCACCAGTAATGTGATAGGATCGGGAGGATTTGGCATGGTATACAGAGGAACACTGGTGGATGGAAAAGTAGTTGCAATCAAAAGAGCTCAACAAGGATCAATGCAGGGTGGTCACGAGTTCAAGACGGAAATTGAGCTGCTTTCACGAGTTCATCACAAGAATCTTCTAGGCCTAGTGGGATTTTGTTCCGAACAAGGAGAACAGATTCTTGTTTATGAGTTCATGCCTAATGGGACACTTAGACAGAGCCTAGCTGGAAAATGTGGTATTTATCTTGATTGGAAGAGAAGGCTTCGTATCGCGCTGGGGTCGGCCAGAGGACTGACTTACTTACACGAGCTTGCTAATCCTCCCATAATTCATAGAGATGTCAAGTCCACCAACATTTTACTAGATGAACGTTTAAATGCAAAGGTTGCTGATTTTGGCTTGTCCAAGCTTGTCTCAGACAGTGTAAAGGGACATGTTTCTACTCAAGTCAAAGGCACATTGGGTTATTTGGATCCTGAATATTACATGAGTCAACAATTGACGGAGAAAAGTGACGTGTACAGTTTTGGAGTAGTTATGTTGGAATTACTAACTGCTAAGCTGCCAATTGAAAAAGGGAAATACATAGTTCGCGAGGTACGTATGTCGATGAATAAGAGTGATGAAGAATATTACGGTTTAAAGCACATAATAGATGCAGCCATAATAGATAATACGACGAATCTTATCGGGTTTGGAAAGTTCTTAGAGTTGGCCATGCAATGTGTTGAAGAAGCAGCCGCAGACCGGCCCACAATGAGTGAAGTGGTTAAAACAATTGAAAACATTTTGCAGAATGATGGAATAAATACAACCTCAACATCAGCATCCTCATCTGCCACAGACTTCGGGACTTCCAAAACTGCTTCTGGACATCCTTATAATGATGCTTTGCAGAAAGAGAGCGTCAACAAGAACAGCCAATGA 2835 41.23 MGAILAVSVVQTLLFLAFFYLAASYTDSHDSSVLQSLKDGWQNTPPSWGTTNDPCGAPWEGVICKNSRVVALKLSSMGLKGKLGGDIGGLTELRSLDLAANRDLIGSISSALGSLLKLETLILSTCGFSGNIPEELGNLTELTFLSLYSNNFTGTIPATLGKLSNLYWLDLADNQLTGALPVSTSGSSGLDQLFKAKHFHFSKNQLSGTIPPELFRSEMVLLHILFDGNNFSGSIPPTLGLVKTLEVLRLDRNSLTGNVPSTLSNLINVNELHLANNKLTGPLPNLTQMSSLNYVDLSNNSFSSSIAPEWFSNLQSLTTLIVEYGSIRGNLPEGIFSLPRIQQVKLKNNAFSGTLYMGDSIGQLLQLVDLQNNNISSVTSSGYTNALMLTGNPVCDANFLSNTNYCQLQQQQAKPYTTSLVNCGSKSCPSDEKLNPRSCECAYPYEGTLYFRGPSFRELSNITLFHLLEMSLLEKFNRTVSIRNPFFNADDYLQIQLALFPANDKYFNREDIQWIGFDLHSQNYKPPDKFGPYYFFASPYPFSDIDEGSTSTNTGVIIGIAVGCALLVLCLIGIGTYAIQQKRRAEKAKPNAFWVPSGNDSGSAPQLKGARWFSYDELKKCTDNFSTSNVIGSGGFGMVYRGTLVDGKVVAIKRAQQGSMQGGHEFKTEIELLSRVHHKNLLGLVGFCSEQGEQILVYEFMPNGTLRQSLAGKCGIYLDWKRRLRIALGSARGLTYLHELANPPIIHRDVKSTNILLDERLNAKVADFGLSKLVSDSVKGHVSTQVKGTLGYLDPEYYMSQQLTEKSDVYSFGVVMLELLTAKLPIEKGKYIVREVRMSMNKSDEEYYGLKHIIDAAIIDNTTNLIGFGKFLELAMQCVEEAAADRPTMSEVVKTIENILQNDGINTTSTSASSSATDFGTSKTASGHPYNDALQKESVNKNSQ 944
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27598337 27605052 - CePI673135_10g013310.1 Cec10g1331 214246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1331 944 Gene3D Ribonuclease Inhibitor 27 221 IPR032675 -
Cec10g1331 944 CDD STKc_IRAK 631 899 - -
Cec10g1331 944 SMART serkin_6 625 879 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1331 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 745 757 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1331 944 SUPERFAMILY L domain-like 307 396 - -
Cec10g1331 944 Gene3D Ribonuclease Inhibitor 222 284 IPR032675 -
Cec10g1331 944 ProSiteProfiles Protein kinase domain profile. 625 900 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1331 944 SUPERFAMILY Protein kinase-like (PK-like) 610 910 IPR011009 -
Cec10g1331 944 ProSitePatterns Protein kinases ATP-binding region signature. 631 653 IPR017441 GO:0005524(InterPro)
Cec10g1331 944 FunFam Leucine-rich repeat protein kinase family protein 595 700 - -
Cec10g1331 944 Gene3D Ribonuclease Inhibitor 285 433 IPR032675 -
Cec10g1331 944 FunFam Leucine-rich repeat family protein 29 185 - -
Cec10g1331 944 SUPERFAMILY L domain-like 39 302 - -
Cec10g1331 944 Gene3D Phosphorylase Kinase; domain 1 597 700 - -
Cec10g1331 944 Gene3D Transferase(Phosphotransferase) domain 1 701 924 - -
Cec10g1331 944 FunFam Predicted protein 188 409 - -
Cec10g1331 944 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 701 913 - -
Cec10g1331 944 Pfam Protein tyrosine and serine/threonine kinase 627 895 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1331 944 MobiDBLite consensus disorder prediction 907 944 - -
Cec10g1331 944 Pfam Leucine Rich Repeat 142 163 IPR001611 GO:0005515(InterPro)
Cec10g1331 944 Pfam Leucine Rich Repeat 117 139 IPR001611 GO:0005515(InterPro)
Cec10g1331 944 Pfam Leucine Rich Repeat 245 266 IPR001611 GO:0005515(InterPro)
Cec10g1331 944 Pfam Leucine Rich Repeat 291 314 IPR001611 GO:0005515(InterPro)
Cec10g1331 944 PANTHER RECEPTOR-LIKE PROTEIN 55 43 897 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0002 Cec-Chr2:32164 Cec10g1331 Cec-Chr10:27598337 6.10E-221 dispersed
Cec04g0749 Cec-Chr4:26760230 Cec10g1331 Cec-Chr10:27598337 1.60E-92 dispersed
Cec10g1331 Cec-Chr10:27598337 Cec10g2293 Cec-Chr10:37101359 0.00E+00 dispersed
Cec11g1957 Cec-Chr11:33629984 Cec10g1331 Cec-Chr10:27598337 1.40E-55 dispersed
Cec10g1330 Cec-Chr10:27591339 Cec10g1331 Cec-Chr10:27598337 3.00E-64 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72324 PF07714 PK_Tyr_Ser-Thr 1.10E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1331 - - - 0.0