Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1355 ATGGAGTTGGTAAGCGAGAAGAGGGATTTTGATTCTTCAAACGACAACAACAAGCTCAACTCTGCTCAACCACTTCTTGATTCTTCTTATCAACCCTCACCCGCTGATGACACAAATGCCAAAGAAGCTGAAGAGTTAAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACGTCATATGAGGACAACATAAAAAAGATCGTGGACTTCAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCTTTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCGAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTTCTTGCTTTAGTGGGCGACCAACTTGATTTTGGCGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTCTGGAACCGCAATGCATCTGATCATCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCGCATGGGTATGTAATGGAATACAAACCCCATGATGCGTCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGAACCTTGGAAAAGACATCTACACAAGACAACTTCTGTTTACATCCGATGTTGATGCTGGAATAGCAGAGCAGCTAAGTTCTGTCCATTGTAATAATGGACAAATACAGCTGGCTAATGTCAGCTTCTTTTGTCTTGGACAACTCACCATGAATATTTCAACCCCCATCCCTTCTTCACTTTAA 897 44.48 MELVSEKRDFDSSNDNNKLNSAQPLLDSSYQPSPADDTNAKEAEELSERVARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRGNLGKDIYTRQLLFTSDVDAGIAEQLSSVHCNNGQIQLANVSFFCLGQLTMNISTPIPSSL 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27803049 27814448 + CePI673135_10g013550.1 Cec10g1355 214270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1355 298 Gene3D RNA Cap, Translation Initiation Factor Eif4e 31 231 IPR023398 -
Cec10g1355 298 Pfam Eukaryotic initiation factor 4E 60 218 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cec10g1355 298 MobiDBLite consensus disorder prediction 15 36 - -
Cec10g1355 298 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 35 232 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Cec10g1355 298 SUPERFAMILY eIF4e-like 35 234 IPR023398 -
Cec10g1355 298 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Cec10g1355 298 FunFam Eukaryotic translation initiation factor NCBP 31 231 - -
Cec10g1355 298 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0750 Cec-Chr6:8776806 Cec10g1355 Cec-Chr10:27803049 4.10E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1355 K03259 - csv:101204290 480.715