Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1381 ATGGATCAAAGCTCTGAGCTTTACAGATTGCTGGCACAGAACGGAGCCTTCAGCCTGGGCGGCGCCGGCCGATCCTGCGGCTTTCCGGCGACCCAAAGCATGTCGAGCTCTTCCTCTTATTACCCTTTGGATAAGTCCACGGCGGCGGCCGCCAGTGAGGCAGCGGTGCCGTCGGCCCACGACAGAGCTCTGGCGGCCCTCAAGAATCACAAGGAAGCTGAGAAGCGGAGGAGAGAGAGAATCAACTCTCATCTTGATAAGCTTCGGACTCTTCTTCCTTGTAATTCTAAGACGGACAAGGCATCTCTTCTGGCAAAAGTGGTTGAGCGAGTGAAAGAGCTGAAGAACGAGACGTCGGAGATCGCGGAGCTCGAAAGCTTCCCTTCGGAGACGGACGAGATCAGTGTGCTGTCCGGAGAGCAGTCGGTGGACGGAAGGCTTGTGTTCAAGGCGTCGTTGTGTTGCGAGGACCGCTCCGACCTCATCCCGGACCTCAACGACATCCTTAATTCCCTCCAACTCAAAACCCTTAGGGCTGACATTGTCACGGTGGGTGGCCGGATCCGCAACGTCCTCCTTATCGCTGCCAACCACCACCACAGCCTCGAGTCCGTTCATTTCCTTCAAAATGCCTTGAAATCTCTCCTTGAACGCTCCAATTCTAGCCTTACATCCAAGAGGAGGCGCCTTGTACTTCACCACAAATGA 708 55.37 MDQSSELYRLLAQNGAFSLGGAGRSCGFPATQSMSSSSSYYPLDKSTAAAASEAAVPSAHDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVERVKELKNETSEIAELESFPSETDEISVLSGEQSVDGRLVFKASLCCEDRSDLIPDLNDILNSLQLKTLRADIVTVGGRIRNVLLIAANHHHSLESVHFLQNALKSLLERSNSSLTSKRRRLVLHHK 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 28099448 28101110 - CePI673135_10g013810.1 Cec10g1381 214296
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1381 235 CDD bHLH_AtAIG1_like 61 136 - -
Cec10g1381 235 Pfam Helix-loop-helix DNA-binding domain 69 115 IPR011598 GO:0046983(InterPro)
Cec10g1381 235 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 124 IPR036638 GO:0046983(InterPro)
Cec10g1381 235 PANTHER TRANSCRIPTION FACTOR BHLH30 44 232 IPR045847 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec10g1381 235 SMART finulus 71 120 IPR011598 GO:0046983(InterPro)
Cec10g1381 235 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 114 IPR011598 GO:0046983(InterPro)
Cec10g1381 235 Gene3D - 61 125 IPR036638 GO:0046983(InterPro)
Cec10g1381 235 FunFam transcription factor bHLH30 60 123 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1087 Cec-Chr6:20016543 Cec10g1381 Cec-Chr10:28099448 3.90E-39 dispersed
Cec08g1202 Cec-Chr8:23957534 Cec10g1381 Cec-Chr10:28099448 3.50E-24 dispersed
Cec10g1381 Cec-Chr10:28099448 Cec11g0634 Cec-Chr11:6953657 2.10E-26 dispersed
Cec10g1381 Cec-Chr10:28099448 Cec03g0632 Cec-Chr3:6773526 1.00E-31 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30388 PF00010 HLH 3.60E-12 No_clan Cec TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1381 - - - 0.0