Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g1393 | ATGCGGTTATGGCGTCCTCGTTGTTCCCTCTCATCTGTCGGAAACACTCCACGTGAGCCTCTCTTGCTCTTCCGTTCTATCAATCTCTCCTCTTCCCACCAAATTCGGTCGCCAATTTTACTCCACTTCTCGGAATCTCACCGTTTCTCCACATTTTCAATTGCCGAAGACGAGAAGTATGGCTTCTGTCGGCCGGAGATGTATCGGAGCAATCTTTCGGGAACCGTTGCGGCTTACGAGCGCCATGTGTTCCTATGTTATCGAAATCCTGAGGTCTGGCCGTCCCGCGTTGAACACTCGGACGCTGATCTGCTGCCTAAGCTCCTATCTTCTGCCATCAGAGCTCGTAAAAATGAAATTTCTGTTAAGACGAAACTGACAATATGCGAGGCAGGGGAGGGAACGGAGTATTCTGATGGAGATGTATTGATTTTTCCGGAAATGGTCAAATACAGGGGCTTGCAAGATAAAGGTGTGGAGCGGTTTGTTGAGGATGTGCTTTTGAATGGTAAACTGCGGACCTCCGGAGTATACGATGTTTTGGCTGGCTCTTATATTTTTGTATGTGGACATGGTAGTCGGGATAAGAGATGTGGTGTCTGTGGACCAGTTCTTGTTTCAAAACTTAAAGAGGAGATTAAACTGAGAAGGCTGAAGGATCAAATATATGTCCATCCATGTTCACACATTGGTGGACACAAGTATGCTGGTAACTTGATTATATATAGTCCAGATTCAGATGGGAGAATCATGGGGCATTGGTATGGCTATGTTACTCCTGATGATGTGCCTGAATTGCTGGACAAACATATTGGAAAGGGAGAGATAGTAGAAAGGCTTTGGAGGGGTCGAATGGAGAGGACCTATGATGAAGAAGGTAAAAGAAAAGACGAAAATAAACTTCCTAGTGCTGGAATTTACAAGGAAACGGAGGATGATAGCCAAGATTCTGGGTGTAATCTGTCATCAGTTACGGAACTATGGACCTCAGTTCCTGCTTCAATCACACTTTGCCCTGTTGAGTTCTACTGTTCGACCAAGAAGATCAACATTGATGACATAATGCTCTGTGTTGGGTTTTATTCTTTTCAAATCTTCTCTTCCTTGTCCCGGGATTCCATAACCTGCCATGATCAGACTCCAGCACGTCAAGGGGTTCTTCAGGTGAAAAGCATTTCATGTTGCATTAATCAAATAATCAGAGCTGTGGAAATTGAAACATCCAACTCCAAACCTTTACTGGCAACAAGTTCATGGATCCTCTTTTCCTCTTCCAAGTTAGATGCAATTGCTCATGCCTGCAATGCACCTGTCACTGTGATTGGATTGAATTTGTTATCATCGAAGTCTACAAAATCACGTCTGGCTGAGCAAATTCGAAGAAAACGTGGAGTGGCTCATGCATTTTTCCAGATCGAATATAGTTCGATTAACACAGTCTTAACAAACATGTCAAAGTCCACAAGGGTGGATAGTGGAGGTTATGGGACGAGGAGTGAGGGTCACATTATTTTGATAAGGATTATACTGGTTGATAGATACGAACTGGGTTCACTTAAGATGAAGCTCTATAGGCGATTGAGGTGGGCGGTCCCGCTAGTGATTGAGTCCCATTTAGCTGATGCAATCACATCTTTGTGCTGTATTGATTGTGATTTGTCGGAAATCAAAAGCGTGGTCCGTAATGTTTTGAATTTGGCAGCTGCTTCTTTGGGGGATGTACAGTTCTCTCTTGTTCTAATATTCCTGGTCCTGAGTGAAGAAATGGCTTCTGGTAATGGGTTTTATCCCACTGATGAATTCAATTTGGATGCTAAATGGTTGATTGATCCTAAGCATCTTTTTGTTGGGCCAAAGATTGGGGAAGGTGCCCATGCCAAGGTGTATGAGGGAAAATACAAAAATCAGATTGTGGCTATCAAAATGGTGGGTAAAGGAGATACTCCTGAGAGGATGGCCAGAAGAGAAGCTCGGTTTGCTAGAGAGGTTGCAATGTTGTCCAAAGTGCAACACAAGAACTTAGTGAAGTTTATTGGCGCTTGCAAGGAACCTATGATGGTTATAGTAACTGAATTACTCACAGGTGGCACATTGCGCAAACATCTCTTGAATTTGAGGCCAAGGAGCTTGGAACTTGATGTGGCGATCGGGTTTGCGCTTGATATTGCTCGTGCCATGGAGTGTTTACACTCTCATGGAATTATTCACCGTGACCTTAAACCAGAAAACTTGATATTGACTGCAGACCGTAAAACAGTTAAGCTTGCTGATTTTGGTTTGGCAAGAGAAGAATCAGTAACAGAGATGATGACTGCAGAAACAGGAACATATAGGTGGATGGCTCCAGAGCTCTATAGCACAGTCACTTTAAAACATGGAGATAAGAAACATTATAATCATAAAGTTGATGCCTACAGCTTTGCCATTGTATTGTGGGAGCTCATCCTTAACAGGCTGCCTTTCGAAGGCATGTCGAATTTACAGGCGGCGTATGCAGCTGCTTTTAAGAACATGAGGCCCAGTGCTGAAAACCTTCCAGAGGACTTAGCTTTAATAGTGACATCATGTTGGAGAGAAGATCCAAATACAAGGCCAAACTTCAGCCAGATTATACAGATGCTATTGCAATCCCTCTCTAGAATATCACCACGAGCACCCATGATCCCACCTCGGATATGTGCTTCTGAAAACGTCGTGATGCCACCCGAATCTCCCGGCACAAATTCCTTGATGGCTGTCAGACATGGCTCGGGGGAAGCCACACACAGCATGATCGAAGAAACCCCAAAAAGCTCCTTCTTCTGCTTTAACAAGTGTTACTGA | 2823 | 43.96 | MRLWRPRCSLSSVGNTPREPLLLFRSINLSSSHQIRSPILLHFSESHRFSTFSIAEDEKYGFCRPEMYRSNLSGTVAAYERHVFLCYRNPEVWPSRVEHSDADLLPKLLSSAIRARKNEISVKTKLTICEAGEGTEYSDGDVLIFPEMVKYRGLQDKGVERFVEDVLLNGKLRTSGVYDVLAGSYIFVCGHGSRDKRCGVCGPVLVSKLKEEIKLRRLKDQIYVHPCSHIGGHKYAGNLIIYSPDSDGRIMGHWYGYVTPDDVPELLDKHIGKGEIVERLWRGRMERTYDEEGKRKDENKLPSAGIYKETEDDSQDSGCNLSSVTELWTSVPASITLCPVEFYCSTKKINIDDIMLCVGFYSFQIFSSLSRDSITCHDQTPARQGVLQVKSISCCINQIIRAVEIETSNSKPLLATSSWILFSSSKLDAIAHACNAPVTVIGLNLLSSKSTKSRLAEQIRRKRGVAHAFFQIEYSSINTVLTNMSKSTRVDSGGYGTRSEGHIILIRIILVDRYELGSLKMKLYRRLRWAVPLVIESHLADAITSLCCIDCDLSEIKSVVRNVLNLAAASLGDVQFSLVLIFLVLSEEMASGNGFYPTDEFNLDAKWLIDPKHLFVGPKIGEGAHAKVYEGKYKNQIVAIKMVGKGDTPERMARREARFAREVAMLSKVQHKNLVKFIGACKEPMMVIVTELLTGGTLRKHLLNLRPRSLELDVAIGFALDIARAMECLHSHGIIHRDLKPENLILTADRKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLKHGDKKHYNHKVDAYSFAIVLWELILNRLPFEGMSNLQAAYAAAFKNMRPSAENLPEDLALIVTSCWREDPNTRPNFSQIIQMLLQSLSRISPRAPMIPPRICASENVVMPPESPGTNSLMAVRHGSGEATHSMIEETPKSSFFCFNKCY | 940 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 28233276 | 28248906 | - | CePI673135_10g013930.1 | Cec10g1393 | 214308 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g1393 | 940 | SUPERFAMILY | Thioredoxin-like | 185 | 286 | IPR036249 | - | |
Cec10g1393 | 940 | SMART | serkin_6 | 614 | 878 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec10g1393 | 940 | Gene3D | Phosphorylase Kinase; domain 1 | 602 | 693 | - | - | |
Cec10g1393 | 940 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 734 | 746 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec10g1393 | 940 | Pfam | Sucrase/ferredoxin-like | 72 | 283 | IPR009737 | - | |
Cec10g1393 | 940 | FunFam | APD1p protein | 183 | 282 | - | - | |
Cec10g1393 | 940 | FunFam | Kinase suppressor of Ras 1 | 603 | 693 | - | - | |
Cec10g1393 | 940 | SUPERFAMILY | Protein kinase-like (PK-like) | 606 | 897 | IPR011009 | - | |
Cec10g1393 | 940 | PANTHER | ACTIN PATCHES DISTAL PROTEIN 1 | 48 | 419 | IPR009737 | - | |
Cec10g1393 | 940 | ProSitePatterns | Protein kinases ATP-binding region signature. | 620 | 645 | IPR017441 | GO:0005524(InterPro) | |
Cec10g1393 | 940 | CDD | STKc_MAP3K-like | 620 | 874 | - | - | |
Cec10g1393 | 940 | Gene3D | Transferase(Phosphotransferase) domain 1 | 696 | 886 | - | - | |
Cec10g1393 | 940 | ProSiteProfiles | Protein kinase domain profile. | 614 | 878 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec10g1393 | 940 | Gene3D | Glutaredoxin | 183 | 283 | - | - | |
Cec10g1393 | 940 | CDD | TRX_Fd_Sucrase | 183 | 285 | IPR009737 | - | |
Cec10g1393 | 940 | Pfam | Protein tyrosine and serine/threonine kinase | 618 | 874 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec10g1393 | 940 | MobiDBLite | consensus disorder prediction | 291 | 315 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1630 | Cec-Chr4:35622314 | Cec10g1393 | Cec-Chr10:28233276 | 2.20E-74 | dispersed | |
Cec09g2044 | Cec-Chr9:37494793 | Cec10g1393 | Cec-Chr10:28233276 | 1.50E-147 | dispersed | |
Cec09g2240 | Cec-Chr9:39281193 | Cec10g1393 | Cec-Chr10:28233276 | 1.30E-77 | dispersed | |
Cec10g1393 | Cec-Chr10:28233276 | Cec10g2271 | Cec-Chr10:36947823 | 2.20E-114 | dispersed | |
Cec10g1393 | Cec-Chr10:28233276 | Cec02g2427 | Cec-Chr2:41481306 | 9.50E-12 | wgd | |
Cec10g1393 | Cec-Chr10:28233276 | Cec06g1938 | Cec-Chr6:32730833 | 2.00E-160 | wgd | |
Cec10g1393 | Cec-Chr10:28233276 | Cec09g2042 | Cec-Chr9:37481860 | 1.60E-96 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72326 | PF07714 | PK_Tyr_Ser-Thr | 1.30E-55 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g1393 | - | - | - | 0.0 |