Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g1402 | ATGAGAATCCACGCCCCGTCACCGTTAAGAAACGAAGATCATACTTACGACTCCGTTTTGCGTTCTCATAGAAAATTGTCTTGTAGAAATTGCTCGAAAATGGCGGGTCTTGAGGAACTTAAGAAGAAACTTACTCCATTGTTTGATGCTGAAAAGGGGCTTTCTATGGACTCCCCTGTGGACCCTTCTGATTCTTATACGTTTTCAGACAATGGGACTGTTAATTTGCTGAGCCGATCATATGGGGTTTACAATTTTAATGAGCTAGGGTTACAAAAATGCACGTCTTGGCTTGCTGATGATTCGGGGAGTAGTGAGAGAACATATCGATGTGCTTCCCGTGAAATGAGGATATTTGGAGCCATTGGTAGTGGTGCTAGCAGTGTTGTTCAAAGAGCTATCCACATTCCTGCTCATCGAATCATGGCACTAAAGAAGATTAATATCTTCGAAAAGGAGAAAAGACAGCAGCTTCTTACCGAGATAAGGACACTATGTGAAGCGCCCTGTTCTGAGGGTCTTGTGGAGTTTCATGGAGCATTTTATACCCCTGATTCTGGGCAAATAAGCATCGCTTTGGAGTACATGGATGGAGGGTCATTGGCAGATGTCCTGCGTCTGAAAAAATGTATACCCGAGCCTGTCCTTTCATCTATGTTTCAGAAACTTCTTCAAGGTCTAAGTTACCTGCATGGAGTAAGACATTTGGTTCACAGAGATATAAAGCCAGCTAATTTACTAGTAAATCTGAAGGGTGAAGCAAAGATTACGGATTTTGGCATAAGTGCCGGCTTAGAGAATTCAATGGCAATGTGTGCTACTTTCGTTGGAACTGTCACATACATGTCGCCAGAGCGAATTCGAAACGAGAGCTATTCTTATCCAGCTGACATTTGGAGCCTTGGGCTTGCACTCTTTGAGTGTGGTACTGGTGAATTTCCATATTCAGCTACTGAAGGTCTAGTGAACCTCATGTTGCAGATTTTGGATGACCCGTCTCCATCACCATCAAAACATAAGTTTTCGCCGGAGTTTTGCTCTTTTGTCGATGCCTGCTTGCAGAAAGATGCAGATGCTAGGCCAACAGCAGAGCAACTGCTATCACACCCATTTATTAAAAAATATGAGGATGAACAAGTAGACTTGGCAGCATTTGTCCAGAATGTGTTTGATCCAGTACAGAGGATGAAGGACTTGGCAGATATGTTGACAATCCATTATTACTTGCTTTTTGATGGACCTGATGAATTCTGGCACCATACAAAAGCTCTGTACCATGAAAGCTCAAGTTTAAGTTTTTCAGGGAAGCAATTTTCTGGTCCAAGTGATATCTTTGCCAAACTATCAGAAGTTCGAAGTACATTAGCAGGAGACTGGCCTCTTGAAAAACTAGTTCACGTTGTCGAAAAACTCCAATGTCGTGCTCACGGTCGGGATGGTGTTGCCATAAGGGTGTCGGGATCCTTCATCCTTGGGAACCAGTTCCTCATATGTGGAGATGGTGTACAAGTAGAGGGACTGCCAAATTTTAAGGATCTCTCCATTGACATGGAGAGTAAGAAAATGGGATCCTTTCGGGAGCAGTTCATCATCGAACCGAGCAACCTCATCGGTCGTTATTTCATTGCCAAACAAGAGCTTTATATAATTCAATAG | 1656 | 43.0 | MRIHAPSPLRNEDHTYDSVLRSHRKLSCRNCSKMAGLEELKKKLTPLFDAEKGLSMDSPVDPSDSYTFSDNGTVNLLSRSYGVYNFNELGLQKCTSWLADDSGSSERTYRCASREMRIFGAIGSGASSVVQRAIHIPAHRIMALKKINIFEKEKRQQLLTEIRTLCEAPCSEGLVEFHGAFYTPDSGQISIALEYMDGGSLADVLRLKKCIPEPVLSSMFQKLLQGLSYLHGVRHLVHRDIKPANLLVNLKGEAKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALFECGTGEFPYSATEGLVNLMLQILDDPSPSPSKHKFSPEFCSFVDACLQKDADARPTAEQLLSHPFIKKYEDEQVDLAAFVQNVFDPVQRMKDLADMLTIHYYLLFDGPDEFWHHTKALYHESSSLSFSGKQFSGPSDIFAKLSEVRSTLAGDWPLEKLVHVVEKLQCRAHGRDGVAIRVSGSFILGNQFLICGDGVQVEGLPNFKDLSIDMESKKMGSFREQFIIEPSNLIGRYFIAKQELYIIQ | 551 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 28358272 | 28364530 | - | CePI673135_10g014020.1 | Cec10g1402 | 214317 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g1402 | 551 | SUPERFAMILY | Protein kinase-like (PK-like) | 118 | 407 | IPR011009 | - | |
Cec10g1402 | 551 | Gene3D | Transferase(Phosphotransferase) domain 1 | 198 | 398 | - | - | |
Cec10g1402 | 551 | FunFam | Mitogen-activated protein kinase kinase 3 | 396 | 550 | - | - | |
Cec10g1402 | 551 | ProSitePatterns | Protein kinases ATP-binding region signature. | 122 | 145 | IPR017441 | GO:0005524(InterPro) | |
Cec10g1402 | 551 | Pfam | Protein kinase domain | 120 | 372 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec10g1402 | 551 | FunFam | mitogen-activated protein kinase kinase 3 | 89 | 197 | - | - | |
Cec10g1402 | 551 | CDD | PKc_MAPKK_plant_like | 117 | 376 | - | - | |
Cec10g1402 | 551 | Gene3D | Phosphorylase Kinase; domain 1 | 92 | 197 | - | - | |
Cec10g1402 | 551 | ProSiteProfiles | Protein kinase domain profile. | 116 | 372 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec10g1402 | 551 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 236 | 248 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec10g1402 | 551 | Gene3D | - | 399 | 549 | - | - | |
Cec10g1402 | 551 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 88 | 405 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Cec10g1402 | 551 | SUPERFAMILY | NTF2-like | 397 | 549 | IPR032710 | - | |
Cec10g1402 | 551 | ProSiteProfiles | Nuclear transport factor 2 domain profile. | 399 | 549 | IPR018222 | - | |
Cec10g1402 | 551 | SMART | serkin_6 | 116 | 372 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec10g1402 | 551 | FunFam | mitogen-activated protein kinase kinase 3 | 198 | 394 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec10g1402 | Cec-Chr10:28358272 | Cec11g0214 | Cec-Chr11:2311386 | 8.50E-66 | dispersed | |
Cec10g1402 | Cec-Chr10:28358272 | Cec03g1594 | Cec-Chr3:34045737 | 7.90E-64 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72328 | PF00069 | Pkinase | 1.50E-59 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g1402 | K20607 | - | csv:101217978 | 1009.59 |