Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g1403 | ATGTTGAAACAACAGCTTACAGAAAGGAGAAAAAATTATTGGAAGATGTCTTCTTCCACCTACTCCAATTCTCCCTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGCCTACCGGATTGTGTTTTCGCACCGTATTTCCCGCCCGAAGAGCCCCAAAAGTTCGCCAATGTCCACAAGATCTTCGGCGCCAGCAATGTTAGTAAACTGCTGAACGAAGTCCAGCCGCATCAGCGGGAGGACGCTGTGAACTCGCTCGCCTACGAGGCCGAGGCGAGGATGAAAGACCCTGTCTATGGCTGCGTTGGTGCCATCTCTATACTCCAAAGGCAAGTCATCAAGCTCCAAAAAGAGCTTGACGCTACCAACGCTGACCTCATTCGCTATGCCTGCAGCGAAATCCCCACTCCATCTCCGTCCTCGTCATCGCAATATGCTCAAAGGTCGTCGTCGACGAGCCACGAAGGAAGCTCATCTACCTCTAGCTATGGTCATTACTATTCTGGTCTCTACTTTTCTCCATGGAGTAACAACAATAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAA | 579 | 49.74 | MLKQQLTERRKNYWKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPTPSPSSSSQYAQRSSSTSHEGSSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK | 192 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 28374804 | 28377080 | + | CePI673135_10g014030.1 | Cec10g1403 | 214318 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g1403 | 192 | MobiDBLite | consensus disorder prediction | 172 | 192 | - | - | |
Cec10g1403 | 192 | Coils | Coil | 104 | 124 | - | - | |
Cec10g1403 | 192 | ProSiteProfiles | LOB domain profile. | 24 | 125 | IPR004883 | - | |
Cec10g1403 | 192 | Pfam | Lateral organ boundaries (LOB) domain | 25 | 122 | IPR004883 | - | |
Cec10g1403 | 192 | MobiDBLite | consensus disorder prediction | 134 | 160 | - | - | |
Cec10g1403 | 192 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 23 | 150 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g0553 | Cec-Chr7:6641470 | Cec10g1403 | Cec-Chr10:28374804 | 5.50E-33 | dispersed | |
Cec09g2359 | Cec-Chr9:40416421 | Cec10g1403 | Cec-Chr10:28374804 | 2.90E-35 | dispersed | |
Cec10g1403 | Cec-Chr10:28374804 | Cec11g0606 | Cec-Chr11:6664733 | 2.80E-32 | dispersed | |
Cec02g1407 | Cec-Chr2:31271564 | Cec10g1403 | Cec-Chr10:28374804 | 2.90E-39 | transposed | |
Cec11g0629 | Cec-Chr11:6922287 | Cec10g1403 | Cec-Chr10:28374804 | 5.00E-38 | transposed | |
Cec11g1157 | Cec-Chr11:23600517 | Cec10g1403 | Cec-Chr10:28374804 | 1.70E-46 | transposed | |
Cec09g0066 | Cec-Chr9:560485 | Cec10g1403 | Cec-Chr10:28374804 | 7.10E-22 | transposed | |
Cec01g1438 | Cec-Chr1:29030843 | Cec10g1403 | Cec-Chr10:28374804 | 1.10E-48 | wgd | |
Cec10g1403 | Cec-Chr10:28374804 | Cec06g1923 | Cec-Chr6:32617791 | 6.20E-56 | wgd | |
Cec10g1403 | Cec-Chr10:28374804 | Cec09g2038 | Cec-Chr9:37418146 | 2.30E-58 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30389 | PF03195 | LOB | 3.00E-42 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g1403 | - | - | - | 0.0 |