Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g1422 | ATGCTGGTTATTCGATCCTGCAGTAGGGTCTTAACGGAAAGGAGAATACGTGTGCAACGGAAGACTATGGCAATAACAGCGCCAGGACAGCTCAATGTTAACGAGTCCCCTTCGTGGGGATCTAGAAGCGTTGATTGCTTTGAAAAACTGGAGCAGATTGGTGAAGGCACTTATGGTCAAGTTTACATGGCCAGAGAATTAAAAACAGGTGAAATTGTTGCGCTGAAGAAAATACGAATGGATAATGAGAGGGAAGGGTTCCCCATTACTGCCATACGAGAAATAAAAATTCTAAAGAAGCTCCATCATGAAAATGTAATAAAGTTGAAAGAGATTGTGACATCTCCAGGTCCTGAGCAGGATGAACAAGGGAAGCCAGATGGTAACAAGTATAAAGGTGGCATCTACATGGTTTTTGAGTACATGGACCATGATTTGACAGGTCTTGCTGATCGTCCAGGGATGAGGTTTTCAGTTCCCCAAATTAAGTGCTACATGAGGCAGCTTCTCACAGGGCTTCACTATTGTCATGTAAATCAAGTACTGCACAGGGATATAAAAGGCTCAAATCTGCTTATTGACAATGATGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCCCGATCGTTTTCTAATGATCACAATGCAAATCTAACAAATCGTGTCATTACCTTATGGTACAGACCGCCTGAATTGCTGCTTGGGTCAACAAAATACGGTCCAGCTGTAGACATGTGGTCTGTTGGTTGTATTTTTGCAGAGCTTCTACATGGGAAGCCAATATTCCCTGGCAAGGATGAGCCGGAGCAATTAAATAAGATCTTTGAGCTATGTGGTGCTCCGGATGAAGTCAACTGGCCTGGGGTATCAAAAATCCCTTGGTATAACAATTTCAAACCCACAAGGCCAATGAAGAGACGTCTTAGAGAAGTTTTCAGGCATTTTGATCGTCATGCTTTAGAACTATTGGAGAAGATGCTCACTCTTGATCCTTCTCAGAGGATAGCTGCCAAGGATGCCCTAGATGCGGAGTATTTTTGGACAGATCCATTACCTTGTGACCCTAAAAGTTTACCCAAGTATGAAGCATCACACGAGTTCCAGACAAAGAAGAAGCGTCAACAGCAACGACAACATGAAGAAACTGCAAAAAGACAGAAGTTGCAACATGCACAGCATGGGCGTCTTCCACCTATTCAGCAATCGGGGCAAGCTCATGCGCAGATGCGACCAGTAGCTAACCAGCCTATTCATGGGTCTCAACCACCAATTGCTGCAGGGCCTAGCCATCATTTTGGGGGGAAGCCTCGTGGACCCCCAGGTCCTGGTAGGTATCCCTCAGGTGGAAACCCTCCTTCTGGATACAACCACCCAAGTCGTGGTGGTCAAGGTGGGGGTGGTTACGGCAACACACAATATACTCAAGGACGAGGTGCACCCTATGGGTCTGGCAACATGTCTGGTGCTGGTCCCCGAGGTGGGGCTGGAGGTGCTGGTTATGGCGTGGGAGCTTCAAGTTACCCACAGAATGGTCCATATGCTGGTAGTTCTGGTACTGGCCGTGGCTCCAATGTGATGGGCGGAAACCGAAACCAACAATATGGATGGCAACAGTGA | 1617 | 46.51 | MLVIRSCSRVLTERRIRVQRKTMAITAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMARELKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEQDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNDGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPSQRIAAKDALDAEYFWTDPLPCDPKSLPKYEASHEFQTKKKRQQQRQHEETAKRQKLQHAQHGRLPPIQQSGQAHAQMRPVANQPIHGSQPPIAAGPSHHFGGKPRGPPGPGRYPSGGNPPSGYNHPSRGGQGGGGYGNTQYTQGRGAPYGSGNMSGAGPRGGAGGAGYGVGASSYPQNGPYAGSSGTGRGSNVMGGNRNQQYGWQQ | 538 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 28564247 | 28570826 | - | CePI673135_10g014220.1 | Cec10g1422 | 214337 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g1422 | 538 | MobiDBLite | consensus disorder prediction | 465 | 481 | - | - | |
Cec10g1422 | 538 | MobiDBLite | consensus disorder prediction | 357 | 538 | - | - | |
Cec10g1422 | 538 | Pfam | Protein kinase domain | 47 | 346 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec10g1422 | 538 | Gene3D | Transferase(Phosphotransferase) domain 1 | 144 | 386 | - | - | |
Cec10g1422 | 538 | MobiDBLite | consensus disorder prediction | 509 | 538 | - | - | |
Cec10g1422 | 538 | MobiDBLite | consensus disorder prediction | 359 | 388 | - | - | |
Cec10g1422 | 538 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 181 | 193 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec10g1422 | 538 | Gene3D | Phosphorylase Kinase; domain 1 | 34 | 143 | - | - | |
Cec10g1422 | 538 | FunFam | Cyclin-dependent kinase C-2 | 34 | 143 | - | - | |
Cec10g1422 | 538 | ProSiteProfiles | Protein kinase domain profile. | 47 | 346 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec10g1422 | 538 | SUPERFAMILY | Protein kinase-like (PK-like) | 41 | 354 | IPR011009 | - | |
Cec10g1422 | 538 | MobiDBLite | consensus disorder prediction | 395 | 409 | - | - | |
Cec10g1422 | 538 | FunFam | Cyclin-dependent kinase C-2 | 144 | 386 | - | - | |
Cec10g1422 | 538 | CDD | STKc_CDK9_like | 47 | 346 | - | - | |
Cec10g1422 | 538 | SMART | serkin_6 | 47 | 346 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec10g1422 | 538 | ProSitePatterns | Protein kinases ATP-binding region signature. | 53 | 76 | IPR017441 | GO:0005524(InterPro) | |
Cec10g1422 | 538 | PANTHER | CELL DIVISION PROTEIN KINASE | 47 | 346 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g2538 | Cec-Chr2:42410258 | Cec10g1422 | Cec-Chr10:28564247 | 8.10E-272 | dispersed | |
Cec08g1784 | Cec-Chr8:28927488 | Cec10g1422 | Cec-Chr10:28564247 | 2.30E-79 | dispersed | |
Cec10g1422 | Cec-Chr10:28564247 | Cec11g0067 | Cec-Chr11:826153 | 1.00E-95 | dispersed | |
Cec10g1417 | Cec-Chr10:28519133 | Cec10g1422 | Cec-Chr10:28564247 | 6.00E-32 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72331 | PF00069 | Pkinase | 1.30E-74 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g1422 | K08819 | - | csv:101215918 | 970.689 |