Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1431 ATGGCGGTTTTGCAGCTTCCTTGTGTGAGGATTACTGACTGTTCATCCTCGCCATTGTTGAGAGGAAGTAAATCGTCGTTGTTCTGGGGAAGCAATCTGTGCTTTGGAAATGGAAGTATTAGGGATGGTCCGAGAGTGAAAGCTTCATTCAATGGTCGAGTTGTTAAGGTTTTCGCCATGTCCGATAGTTCTTCTTCTTCTTCATCGTTTAAGATGAATCTCAATGAGTACATGGTTACTCTTGAGAAACCGCTCGGCATTCGGTTCGCGATTTCCATCGATGGAAGAATCTTCGTTCACTCGCTTAAGAAAGGGGGTAATGCTGAGAAGTCAAGAATAATCATGGTGGGGGACACTTTGAAGAAGGCAAGCGATTCATCAGGCGTCAAGCTCACTGAGATTAAAGACTTTGGTGATACACAGATGATTCTGAAGGAGAAAGCAGGATCTTTTAGCCTGGTTCTTGAAAGACCCTTTTCACCCTTTCCTATTCAACAGCTTCTGCTTTCAAACGATTTAGATATTTTATTTAACAGAGGTCGGGTGCCTATTGCTACTTGGAAGAAGGAAGTTTTGGCATCAAACTTACAAACATCTGATGCAAGCAGTGGGAACTCTGGCTTTGCGACTTTCTCCTCTAAGTTCTCTACATCACAAGGTTGGAAACTTCTTAACGATCAAAATGGAAATGTAAAATCACATATGCAGAAAAACATTCTCACGCCTCAAATCAGCCAACTTGTTGGTATATTTACTGAAGAGGAGCCTGGAGTTGGAGAATGGGCTCATGGGAGCTTCCCCCTTGATGAATATGTCAAGGCATTAGAACGGTCTAAAGGGGAGTTATATTATGATCACTCTCGTGGTATGAGCTATAGTAAGATCACGGAGCATATATATGTGGGGTCATGTATACAGACTGAAGCAGACGTTGAAGCTTTAGCAAATGACGTGGGAGTTACCGCTGTACTGAATTTTCAAGGTGCAACTGAGGCAGAAAACTGGGGGATTAATTCCAAGATAATCAACGAGTCGTGCCAAAAATTTGACATTCTAATGATCAGCTATCCTATCAGGGCAGGAGATTCTTATGATTTGAGGAAAAAACTACCATTCTGTGTGGGTCTACTTCTCCGACTGTTAAAAAAGAACCATCGAGTTTTTATAACTTGTACTTCTGGTTTTGATCGATCTCCAGCAAGTGTTATTGCATATCTACACTGGATGACCGATACTTCTCTTCATGCAGCTTATAATTTTATCACCAGTTTGCATTCCAGCAAACCTGACAGGCCTGCAATCGCTTGGGCTACCTGGGATCTCATAGCAATGGTGGAAAATGGAAGGCATGATGGACCTCCCACTCATGCCGTTACCTTCGTATGGAATGGACAAGAGGGGGAGGATGTAAATTTGGTTGGAGATTTTACTGGTAACTGGAAAGAACCGGTCAAGGCTAGTCACAAGGGTGGGCCTAGATATGAAGTAGAAATGAAACTTCCTCAGGGGAAGTATTATTATAAGTACATCACAAATGGTCAGTGGAGGCACTCAACATCTTCACCTGCTGAAAGAGACGATAGCGGGAATGTTAACAATGTAATAGTCATTGGCGACACTGCCAGTGTTAGGCCTTCAGTTCAACCGCAAAAAAAAGATGCAAATATCGTGAAGGTAATCGAAAGGCCATTGACAGAAAACGAGCGGTTTATGTTGGCGAAAGCGGCTCGTTGTGTTGCATTTTCAGTATGTCCAATTAGATTAACTCCCAAGTAG 1776 42.62 MAVLQLPCVRITDCSSSPLLRGSKSSLFWGSNLCFGNGSIRDGPRVKASFNGRVVKVFAMSDSSSSSSSFKMNLNEYMVTLEKPLGIRFAISIDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASDSSGVKLTEIKDFGDTQMILKEKAGSFSLVLERPFSPFPIQQLLLSNDLDILFNRGRVPIATWKKEVLASNLQTSDASSGNSGFATFSSKFSTSQGWKLLNDQNGNVKSHMQKNILTPQISQLVGIFTEEEPGVGEWAHGSFPLDEYVKALERSKGELYYDHSRGMSYSKITEHIYVGSCIQTEADVEALANDVGVTAVLNFQGATEAENWGINSKIINESCQKFDILMISYPIRAGDSYDLRKKLPFCVGLLLRLLKKNHRVFITCTSGFDRSPASVIAYLHWMTDTSLHAAYNFITSLHSSKPDRPAIAWATWDLIAMVENGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVKASHKGGPRYEVEMKLPQGKYYYKYITNGQWRHSTSSPAERDDSGNVNNVIVIGDTASVRPSVQPQKKDANIVKVIERPLTENERFMLAKAARCVAFSVCPIRLTPK 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28681327 28686922 + CePI673135_10g014310.1 Cec10g1431 214346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1431 591 ProSiteProfiles Dual specificity protein phosphatase domain profile. 291 450 IPR020422 GO:0006470(InterPro)
Cec10g1431 591 SUPERFAMILY PDZ domain-like 58 127 IPR036034 GO:0005515(InterPro)
Cec10g1431 591 Gene3D Immunoglobulins 445 541 IPR013783 -
Cec10g1431 591 SUPERFAMILY E set domains 455 538 IPR014756 -
Cec10g1431 591 ProSiteProfiles PDZ domain profile. 78 159 IPR001478 GO:0005515(InterPro)
Cec10g1431 591 FunFam Phosphoglucan phosphatase LSF1, chloroplastic 445 541 - -
Cec10g1431 591 Pfam Glycogen recognition site of AMP-activated protein kinase 458 539 IPR032640 -
Cec10g1431 591 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 283 426 IPR029021 -
Cec10g1431 591 CDD DSP_laforin-like 290 436 IPR045204 GO:0019203(InterPro)
Cec10g1431 591 Gene3D Protein tyrosine phosphatase superfamily 284 550 IPR029021 -
Cec10g1431 591 CDD E_set_AMPKbeta_like_N 458 537 - -
Cec10g1431 591 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 59 585 - GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0043036(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1431 - - - 0.0