Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1438 ATGAAAGAAAAGAGTGAACGTGGAGGTGGGTATGTGAGAGCAGATCAAATAGATCTGAAGAGCTTAGACGAGCAGTTACAGAGACATTTGAGCAAAGCATGGACCATGGAGAAGAACAAGAAGAGGGAAGATGAGGAAGGCGTCGGCGTCGGCGGTGGTGGAGGAGGAGGCGTCGGCGGCGGAAGGCCGGCTATCACTAGGCAGGAGTGGGAGATTGACCCTTCTAAACTCATCATCAAAGCCGTCATAGCTCGTGGCACTTTTGGAACTGTTCATCGTGGAATTTATGATGGTCAAGATGTTGCTGTTAAACTTCTTGACTGGGGGGAAGAGGGGCATAGGTCGGAGGCAGAAATCGCGTCGCTTAGAGCGGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTTACAAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACACATACAAACAGAAAATGGCCAAATTGGCATGCCCAGCAATATTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCTCTGAAATCCTACCTCATAAAGAACAGGAGGAAAAAGCTGGCTTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCATTCACAGAAGATTGTTCATAGAGATGTCAAAACAGAAAATATGCTTCTGGACAAAACGAGAATGGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTTGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACACTTGGGTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTATGGGAAATATACTGCTGCGATATGCCATATCCCGACCTTAGCTTCTCAGAAGTGACATCAGCTGTTGTCCGACAGAATCTGAGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTGCAAATGTAATGAAGCGATGCTGGGATGCTAACCCGGACAAGCGTCCAGAGATGGATGAGGTCGTAACCATGTTGGAAGCAATCGACACATCGAAGGGTGGAGGTATGATCCCCCTCGATCAGTCGCAAGGCTGTTTTTGCTTCCGCAGGTACCGTACAAGGAATCTTTAG 1149 47.08 MKEKSERGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKKREDEEGVGVGGGGGGGVGGGRPAITRQEWEIDPSKLIIKAVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATIGSSDLHIQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRMVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPLDQSQGCFCFRRYRTRNL 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28745843 28750095 + CePI673135_10g014380.1 Cec10g1438 214353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1438 382 SUPERFAMILY Protein kinase-like (PK-like) 63 351 IPR011009 -
Cec10g1438 382 SMART serkin_6 77 354 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1438 382 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1438 382 PRINTS Tyrosine kinase catalytic domain signature 212 230 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1438 382 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1438 382 PRINTS Tyrosine kinase catalytic domain signature 174 187 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1438 382 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1438 382 MobiDBLite consensus disorder prediction 32 48 - -
Cec10g1438 382 FunFam Serine/threonine-protein kinase HT1 177 362 - -
Cec10g1438 382 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 58 352 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Cec10g1438 382 Gene3D Transferase(Phosphotransferase) domain 1 177 368 - -
Cec10g1438 382 FunFam Kinase suppressor of Ras 1 66 161 - -
Cec10g1438 382 Pfam Protein tyrosine and serine/threonine kinase 79 351 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1438 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1438 382 MobiDBLite consensus disorder prediction 32 64 - -
Cec10g1438 382 CDD STKc_MAP3K-like 83 351 - -
Cec10g1438 382 Gene3D Phosphorylase Kinase; domain 1 64 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0582 Cec-Chr5:4774822 Cec10g1438 Cec-Chr10:28745843 1.20E-137 dispersed
Cec09g0701 Cec-Chr9:6195361 Cec10g1438 Cec-Chr10:28745843 8.70E-145 dispersed
Cec10g1438 Cec-Chr10:28745843 Cec11g1164 Cec-Chr11:23849824 6.30E-60 dispersed
Cec01g1470 Cec-Chr1:29367565 Cec10g1438 Cec-Chr10:28745843 4.00E-56 wgd
Cec10g1438 Cec-Chr10:28745843 Cec06g1890 Cec-Chr6:32198222 1.10E-186 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72332 PF07714 PK_Tyr_Ser-Thr 2.70E-64 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1438 - - - 0.0