Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1456 ATGGATCTGGAGAGTGCTATTGGGGGCCACCCAATCAAGAAAGATTCATGGAGAGCTGTTTTAACTTTGGCTTATCAAAGCTTGGGGGTTGTTTATGGCGATTTGAGCACTTCCCCTTTGTATGTTTACAAAAGTACTTTTGCTGAGGATATTCAGCACTCTGAATCCAACGAAGAGATTTATGGAGTTCTTTCTTTTGTTTTCTGGACGCTCACGCTCATTCCTTTGATTAAGTACGTTTTTATTGTGCTTCGAGCTGATGATAATGGCGAAGGAGGAACTTTCGCTTTGTACTCATTGCTCTGCCGCCATGCCCGAGTTAGCTCCTTGCCCAATTGCCAACTTGCAGATGAGGACCTTTCGGAATATACAAAAGATGGGATGGATTTAACCAACAAGAATACTTGTGGGTCGAGATTGAAATCGACATTAGAGAAGCACAGAGTGCTGCAGAGGGTTTTGCTTGTTCTAGCTTTGATTGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACACCTGCAATTTCTGTTTTCTCTGCTGTTTCTGGGCTGGAATTTTCCATGGCTAGAGAACACCATCGCTATGTTGAAGTCCCGGTTGCTTGTGCCATATTGGTAATCCTGTTTGCGATTCAACATTATGGAACCCATCGAGTTGGGTTTCTGTTTGCACCAGTTGTAATTACCTGGCTCCTGTGTATCAGTTCCATAGGGCTGTACAATATCTTCCACTGGAATCCACATGTTTACCGAGCACTCTCCCCATATTATATGTACAAATTTCTGAAGAAGACCCAAAGGGGAGGTTGGATGTCCCTCGGCGGAATCCTGTTATGTATTACAGGTTCAGAAGCAATGTTTGCTGATCTCGGGCACTTCTCGCAGCTATCTATCAAGATTGCTTTCTCTTTTGTGGTTTATCCATCTTTGGTCCTGGCATACATGGGACAAGCTGCTTATCTTTCTCAACATCATGGTGCGGAAAATAACTACCGAATTGGATTTTACGTGTCTGTTCCTGAGAAAATAAGAGTGCCTGTTCTTGTGATCGCCATTTTAGCCGCAGTGGTAGGAAGTCAAGCTGTCATTACTGGGACTTTTTCGATAATAAAACAGTGCTCCTCATTGGGTTGCTTCCCGAGGGTCAAAATTGTTCATACCTCCTCGAAAATCCATGGTCAGATTTATATACCGGAGATCAACTGGACGTTGATGCTCTTATGCTTGGCTATTACCATTGGCTTTCGAGACACGAAACGCATGGGCAATGCATCAGGCTTAGCAGTGATAACTGTTATGCTGGTGACAACCTGCCTAATGTCTGTAGTCATCATCTTGTGCTGGCATAAAAGCTTTCTCTATGCCATTGCCTTCATACTCATTTTCGGGTCAATCGAATCACTCTACTTTTCAGCATCTCTCATCAAGTTTCGAGAAGGGGCCTGGGTTCCCATTGCCCTCTCATTCATCTTCCTAATAGTCATGTATGTATGGCATTACGGAACGCGCAAAAAATACGAATTTGATGTTCAAAACAAAGTCTCAATCAACTGGCTCCTAGGCCTAGGTCCCAGTTTAGGCATTGTGAGAGTACGCGGGATTGGCCTCATATACACCGAACTCGTCTCAGGAATCCCCGCCATCTTCTCCCACTTCGTAACAAACCTCCCGGCCTTCCACCAAGTCCTAGTCTTCCTCTGCATCAAATCCGTCCCTGTCCCACACGTGAGACCAGGAGAAAGGTTCCTAGTAGGACGAGTTGGGCCAAAAGAGTACCGTCTCTACCGATGCATAGCACGATATGGCTATCGTGACATCCACAAAGACGACATGGAGTTCGAGAAGGATTTGGTGTGCAGCATTGCCGAGTTCATCCGGTCCGAAAAGGCAGAGACAAGCGTAAAGCTAGAAGATGTAGAAGAAAGTGAGAGAATGACAGTAGTTGGGACATCTTCAACACATGTAGATGGAGTGAGAATGTGTGAAGATGAAGGAGAAACAGCAGAAACATCAGAGGTAAGAGAGATAAAATCACCAAAAAAGCTGAGAAAAAGAGTGAGGTTTGTTGTACCAGAGAGTCCACGAATGGAAATGGAAACAAGGAGGGAGCTGCAAGAGCTAATGGAAGCAAGAGAAGCAGGAATGGCTTTCATAATGGGACATTCATATGTGAAAGCAAAGAGAGGATCAGGTTTGGTGAAGAAAGTGGTGATAAATTATGGGTATGATTTTTTGAGAAGAAACTCAAGAGGGCCAAGTTATGCTTGGAGTGTGCCTCATGCATCTACTTTAGAGGTGGGAATGGTCTACCAAGTTTGA 2319 44.5 MDLESAIGGHPIKKDSWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSESNEEIYGVLSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVSSLPNCQLADEDLSEYTKDGMDLTNKNTCGSRLKSTLEKHRVLQRVLLVLALIGACMVIGDGVLTPAISVFSAVSGLEFSMAREHHRYVEVPVACAILVILFAIQHYGTHRVGFLFAPVVITWLLCISSIGLYNIFHWNPHVYRALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFSFVVYPSLVLAYMGQAAYLSQHHGAENNYRIGFYVSVPEKIRVPVLVIAILAAVVGSQAVITGTFSIIKQCSSLGCFPRVKIVHTSSKIHGQIYIPEINWTLMLLCLAITIGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWHKSFLYAIAFILIFGSIESLYFSASLIKFREGAWVPIALSFIFLIVMYVWHYGTRKKYEFDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSEKAETSVKLEDVEESERMTVVGTSSTHVDGVRMCEDEGETAETSEVREIKSPKKLRKRVRFVVPESPRMEMETRRELQELMEAREAGMAFIMGHSYVKAKRGSGLVKKVVINYGYDFLRRNSRGPSYAWSVPHASTLEVGMVYQV 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28900416 28905209 + CePI673135_10g014560.1 Cec10g1456 214371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1456 772 Pfam K+ potassium transporter C-terminal domain 533 771 IPR053952 -
Cec10g1456 772 NCBIfam potassium uptake protein 23 772 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cec10g1456 772 Pfam K+ potassium transporter integral membrane domain 23 519 IPR053951 -
Cec10g1456 772 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 772 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1406 Cec-Chr5:15896246 Cec10g1456 Cec-Chr10:28900416 5.20E-249 dispersed
Cec10g1075 Cec-Chr10:23827252 Cec10g1456 Cec-Chr10:28900416 2.00E-166 dispersed
Cec10g1456 Cec-Chr10:28900416 Cec11g0040 Cec-Chr11:543709 8.50E-189 dispersed
Cec03g0056 Cec-Chr3:567795 Cec10g1456 Cec-Chr10:28900416 5.30E-228 transposed
Cec05g2748 Cec-Chr5:37965163 Cec10g1456 Cec-Chr10:28900416 0.00E+00 transposed
Cec07g0559 Cec-Chr7:6804319 Cec10g1456 Cec-Chr10:28900416 3.30E-289 transposed
Cec10g1456 Cec-Chr10:28900416 Cec09g2001 Cec-Chr9:37017380 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1456 K03549 - csv:101211664 1473.37