Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1459 ATGGACCGCAGTTTTCTATACAACCAATTCGCTCCACTGGCTGGAATGATCGCCGCCGAGTGCGCCACCGTCGGCTCAAACACCGTCTACAAAGCCATTAGCGGCCATGAAATCAGCTTCTATGTTTTCACCTTCTACACTTGTCTCGCTGCCGCTCTCGTTCTTCTTCCTTTCGCCTTAATCTTCCGCAGATCTGGCGTTTTTCCGTCCGATAAGTTGTCGTTCTTCCTCAGATTGATCAGCCTGTCGGCGATGGGAGTTGGATGTCAGCTGTTTTCGTATAAAGGTTTGGAATACAGTTCGCCGACGCTTGCTTCCGCCATTAGCAATCTCATTCCAGCTCTCACTTTCATCTTGGCCGTTCTCTTTGGGATGGAGAAACTAGCTTTGAGAAGCTCAAGCAGCATAGCCAAAATCGTTGGCTCGACAGTCTCCATAACAGGTGCACTAGTAGTGGTTCTCTATAAAGGTCCAGTCATTCTATCAAACCCATTTTCTAGGCCAACCAGATTGAATCTTCCTCCTCGTCGTTTGGGCTCTTCCCAACCAAATTGGACAATGGGTGGCCTCTGCTTTTTTGTTCAGTACCTTCTCAACTCTTTCTGGTACATTGTTCTGACCCAAACGATGAACATATACCCAGATGAACTAGTTGTGGTGTGCTTATTCTATGTGTTCGAGGTCATAATAGCTGCACCAATATGCCTATTAGCGGAAGGAAACATCGGTGCTTGGAAGCTGAAAAATAGTCTGGAAGTGGTTGCTGTTTTAAACTCGGGATGTGTGGGTCAATCCTTCGTCTCTGCAATCCACACATGGGGTGTACATGTCAAAGGGCCTGTTTATGTATCAAGTTTCAGGCCACTCTCAATTGCCATTGCTGCTGCTACAGGTGTTATCTTCCTTGGGGACGATCTTCATCTTGGAAGTATTATTGGAGCAATGATAATAGCAAGTGGGTTTTACTCTATAATGTGGGGGAAAATAAAAGAAGAGGACTTGAAGGGACAGGATGGCCTCTCAAGCTTGAAGTCTTCATCAACAGATAAGATTCCATTGTTGAAAAGCTGTAAAGTTCAAAATGACTAA 1089 45.45 MDRSFLYNQFAPLAGMIAAECATVGSNTVYKAISGHEISFYVFTFYTCLAAALVLLPFALIFRRSGVFPSDKLSFFLRLISLSAMGVGCQLFSYKGLEYSSPTLASAISNLIPALTFILAVLFGMEKLALRSSSSIAKIVGSTVSITGALVVVLYKGPVILSNPFSRPTRLNLPPRRLGSSQPNWTMGGLCFFVQYLLNSFWYIVLTQTMNIYPDELVVVCLFYVFEVIIAAPICLLAEGNIGAWKLKNSLEVVAVLNSGCVGQSFVSAIHTWGVHVKGPVYVSSFRPLSIAIAAATGVIFLGDDLHLGSIIGAMIIASGFYSIMWGKIKEEDLKGQDGLSSLKSSSTDKIPLLKSCKVQND 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28930552 28937376 + CePI673135_10g014590.1 Cec10g1459 214374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1459 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Cec10g1459 362 PANTHER WAT1-RELATED PROTEIN 15 340 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec10g1459 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 330 - -
Cec10g1459 362 Pfam EamA-like transporter family 21 146 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0259 Cec-Chr10:2957416 Cec10g1459 Cec-Chr10:28930552 4.70E-19 dispersed
Cec10g1459 Cec-Chr10:28930552 Cec11g1365 Cec-Chr11:27912721 2.40E-37 dispersed
Cec10g1459 Cec-Chr10:28930552 Cec10g1461 Cec-Chr10:28946866 3.70E-118 proximal
Cec10g1459 Cec-Chr10:28930552 Cec09g1993 Cec-Chr9:36955228 4.00E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1459 - - - 0.0