Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1472 ATGGCCGCCGCCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTCCCCTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCGGTTTAAAATCCCACGACTGTCCTAAATCCGATCGGAACAGCCGAAAAGTGGTGGTTTGCGAAATCTGCTCGACGTCGATCGAGACCACCGGAAAGGACGGCGGCGACGAGACCAGGATTTTGGAAAGGCATCACGAATCGGGAGATTGCGATCCGAGCAAGAAGAAGAAGCCTACATGTGCGGTGAGGCGGTGCCGGGAGATTCTTACGTTTTCCAATACTTGTGTTTGTAAAACCTGCCGGATGAAGGTGTGCTTGAAACACCGGTTTCCGGCGGAGCATGGTTGTGGACGGCCGTCGTCGACGGAAGCGGCGGTGGTAGATAAAGGGCGGTGGAATGAAAAGTTTATGGCGGCTTTGGGGTTGAGGAGCGGTGGCGATTGTGGGAAGAGTGAACGGCCGACGGCGGCGAAGGGATCTTCTCCGACTGCCCCATCTGTTAAAGCTTGTTGA 585 56.24 MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGLKSHDCPKSDRNSRKVVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCKTCRMKVCLKHRFPAEHGCGRPSSTEAAVVDKGRWNEKFMAALGLRSGGDCGKSERPTAAKGSSPTAPSVKAC 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29115087 29115765 + CePI673135_10g014720.1 Cec10g1472 214387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1472 194 Gene3D - 2 70 IPR035896 -
Cec10g1472 194 SMART AN1_Zf_4 17 56 IPR000058 GO:0008270(InterPro)
Cec10g1472 194 SMART AN1_Zf_4 104 145 IPR000058 GO:0008270(InterPro)
Cec10g1472 194 SUPERFAMILY AN1-like Zinc finger 64 146 IPR035896 -
Cec10g1472 194 Gene3D - 81 158 IPR035896 -
Cec10g1472 194 SUPERFAMILY AN1-like Zinc finger 10 57 IPR035896 -
Cec10g1472 194 ProSiteProfiles Zinc finger AN1-type profile. 98 148 IPR000058 GO:0008270(InterPro)
Cec10g1472 194 MobiDBLite consensus disorder prediction 168 194 - -
Cec10g1472 194 ProSiteProfiles Zinc finger AN1-type profile. 11 59 IPR000058 GO:0008270(InterPro)
Cec10g1472 194 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 9 169 - GO:0005737(PANTHER)
Cec10g1472 194 Pfam AN1-like Zinc finger 104 142 IPR000058 GO:0008270(InterPro)
Cec10g1472 194 Pfam AN1-like Zinc finger 17 55 IPR000058 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0432 Cec-Chr4:16556816 Cec10g1472 Cec-Chr10:29115087 4.80E-36 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1472 - - - 0.0