Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1481 ATGGCGGCCTCTGCTCGAGCTTTCTTCCTGTCTCGTGTCACTGACTTTTCAATTAAGCCCCGCCTACCTCCCCAACCACCGCCGCCGCCCCCACCCTTGCCTTCTTTTTCCTATTCACATCTCTGCCTTCAACGGCGGCGCTTTCCCCCCACGTCTGGTGCAACCACTGTCAGCTGCCTTATCTCCGGTGTTGATGGTGGTGGAGTTTCCGATGAATTTGTTTCTACCCGGAAGTTGAAATTCGATCGCGGATTCTCCGTAATCGCCAATATGCTTAAGCGGATTGAGCCGCTTGATACATCCGATATCTCCAAGGGCGTTTCTGATGTTGCTAAGGATTCCATGAAGCAGACTATTTCTTCAATGTTGGGTTTGCTTCCGTCGGATCAGTTCGCTGTCACCGTTAGGGTTTCCAAAAGCCCTCTCCATAACCTCCTCTCTTCGTCAATTATCACCGGGTACACTCTGTGGAACGCGGAGTATCGGTTGTCTTTGATGAGGAATTTCGATATCTCGCCGGATAATCTGATGGGCTTGGACAGGTCGAAACCACTTGAAGTATCGGATGTTGAGGAGATTCGGGTTGACGTTGATTCCAATATGGAAGATTTGGATACAAGGCCTCGTCTCTTGACCGATTTGCCACCCGAGGCGTTGAAGTACATCCAGCAGTTGCAGTCAGAATTATCAAATCTTAAGGATGAACTTAATGCTCGGAAGCAAGAAAATATGCAGATAGAACATGGCAGAGGAAACAGAAACGATTTGTTAGAGTATCTGCGGTCTTTGGATTCTAATATGGTCACTGAACTCTGCAAACCATCTACGTCGGAGGTGGAGGAAATCATTCACGAGCTTGTTGGAAACATATTGCAAAGGTTCTTCAAAGATGATGCTAGCTCTACTTTCGTTGAGGATTCGAGTGTGGCGGATTTAGAGAAACTTGCAGATGCTGGCAATGAGTTTTGTGACACTGTAGGCACTTCTCGGGATTACCTAGCAAAGCTTTTATTCTGGTGTATGTTATTGGGGCATCACTTGAGAAGCTTGGAGAATAGACTGCAGTTAAGCTGTGTCAGATCGGAAGAGCAATTGGCTCGGCACCGTTTGAATATCTCGGCGATCAACTCTCGCATCTATGTTCTCCATTGCCACAAAATGTTCGATTGTGGTGGATACAAGTCGCAGTACATAGGCGGTCACAAGGAGAAATTCGTGAGGTTGGATGATTTGGATTCAAATTTGTCAATGCCCTCTGGAACAAGCAAAATGAAGAAATGTCGATTCAACCTAGAAGGCCTCCCACTGCCATTCATTAGCCGATCGAAGCCACAAAATGCGTCCAAATCGTTCCGAAGAGGAGTCCAAAGGAGCTCCGACGGAATCAAAACCCTAGGTCGGTCGCTCCGCTCCGGCGTGTCCAAAGTCATCTTCCCGGAGGATTTGAAAGTATCGGAACAGAAAATCTTCGATCCGCAAGACAAATCGCTCCTCTTCTGGAATAAGCTTTTCGTGCTGTGCTGTATCCTCGCCGTCTCTGTCGATCCACTTTTCTTCTACCTCCCTGTGTTCAACCATGCCTCTTACTGCCTCGGAATGGACACTCAGCTCGCCGTCACGACCACCACCGTGCGTACGGCCATCGATGTTTTCTACTTGATTCGCATGGCGTTTCAGTTCCGGACGGCTTACATTGCGCCATCATCAAGAGTATTTGGTCGCGGCGAGCTTGTGATCGATCCGACGGAAATCGCCCAGCGGTATCTTCAGCGCTACTTTGTAGCCGATTTTTTCTCTGTTCTTCCTCTTCCTCAGGTGGTGGTGTGGAGGTTTCTTCACAGGTCAAAAGGCTCGGAAGTTTTAGCCACAAAACAAGCATTGTTAAACATAGTGTTTCTTCAGTATATTCCCAGATTTATTAGATTTATTCCTTTGAACATAGAGCTTAAGAAGACAGCAGGTGTTTTTGCTGAAAGTGCTTGGGCTGGTGCTGCTTACTATCTCCTCTTGTACATGCTTGCCAGCCATATAGCGGGAGCATTCTGGTACTTGCTGGCAGTGGAGAGGAACGATGCATGTTGGCGCCAAGCATGCAGAAGCAGCGGAAAGTGCAACATTAACTATTTGTATTGTGGGAATAAGCACATGTCCGGTTATAAGGATTGGAGAAATATTAGCGTTGAAGTTCTCACTAAGAAATGCACCGCCGTGGGAGACAATTTGCCTTTCAACTATGGCATTTACACTCAGGCCATTTCCTCAGGCATTGTTCAGTCCAGGACTTTCTTCTCCAAGTTCTGCTATTGCTTGTGGTGGGGCTTGCAAAATTTAAGTACACTTGGTCAGGGGCTGCTCACCAGTACCTATCCTGGGGAGGTTATCTTTTCTATCTTAATTGCAATTTCTGGGCTCCTCCTTTTTGCACTCTTGATTGGAAACATGCAAACGTACCTTCAATCTCTAACCGTCCGACTTGAAGAGATGCGCATCAAGAGGAGAGACTCTGAACAATGGATGCACCATCGACTTCTTCCGCCAGACTTGAGAGAAAAAGTTAGGCGCTACGATCAGTACAAATGGCTAGAAACCAGAGGCGTCGATGAAGAGAGCTTGGTTCAGAGTTTGCCTAAAGATCTTAGGAGAGACATTAAACGACATCTCTGTCTCAATTTGGTTAGAAGGGTCCCTCTATTTGCGAACATGGATGAGCGTCTTCTAGACGCAATATGCGAGAGGCTGAAGCCAACATTATACACAGAGAACACATACATAGTACGAGAGGGCGACCCAGTCGACGAAATGCTTTTCATAATCCGTGGCCGCCTAGAGAGCGTCACGACCGACGGCGGCCGGAGCGGCTTCTACAACCGCGGCGTATTAAAAGAAGGCGATTTCTGTGGCGAAGAGCTTTTAACGTGGGCCCTCGACCCGAAGTCCGGCTCCAACCTCCCCTCCTCCACTCGCACTGTCCATGCCCTTACCGAGGTTGAAGCCTTCGCCTTAGAGGCTGAGGAGCTCAAGTTCGTGGCCAGCCAGTTCCGGCGCCTGCATAGCCGGCAGGTTCAACACACCTTCAGATTCTACTCTCAGCAGTGGCGAACCTGGGCATCGTGTTTTATACAGGCGGCGTGGCGGCGGTATTTGAAGCGGAAGATTGCGGAGCTGCGACGGAAGGAGGAGGAAGAAGAGGATGCGGCGGCGGCTGCGGCTGCGTATGGCACGTCGAGGCTTGGGGCTACAATTTTGGCGTCGAGATTTGCGGCGAATGCGCTTAGAGGGCATCGATTGAGAAATGTGAGTGGGAAGAGCTTGATTAACTTGCAGAAGCCGGCGGAGCCTGATTTTTCTGTGTATAAAGGAGAGTAA 3366 48.84 MAASARAFFLSRVTDFSIKPRLPPQPPPPPPPLPSFSYSHLCLQRRRFPPTSGATTVSCLISGVDGGGVSDEFVSTRKLKFDRGFSVIANMLKRIEPLDTSDISKGVSDVAKDSMKQTISSMLGLLPSDQFAVTVRVSKSPLHNLLSSSIITGYTLWNAEYRLSLMRNFDISPDNLMGLDRSKPLEVSDVEEIRVDVDSNMEDLDTRPRLLTDLPPEALKYIQQLQSELSNLKDELNARKQENMQIEHGRGNRNDLLEYLRSLDSNMVTELCKPSTSEVEEIIHELVGNILQRFFKDDASSTFVEDSSVADLEKLADAGNEFCDTVGTSRDYLAKLLFWCMLLGHHLRSLENRLQLSCVRSEEQLARHRLNISAINSRIYVLHCHKMFDCGGYKSQYIGGHKEKFVRLDDLDSNLSMPSGTSKMKKCRFNLEGLPLPFISRSKPQNASKSFRRGVQRSSDGIKTLGRSLRSGVSKVIFPEDLKVSEQKIFDPQDKSLLFWNKLFVLCCILAVSVDPLFFYLPVFNHASYCLGMDTQLAVTTTTVRTAIDVFYLIRMAFQFRTAYIAPSSRVFGRGELVIDPTEIAQRYLQRYFVADFFSVLPLPQVVVWRFLHRSKGSEVLATKQALLNIVFLQYIPRFIRFIPLNIELKKTAGVFAESAWAGAAYYLLLYMLASHIAGAFWYLLAVERNDACWRQACRSSGKCNINYLYCGNKHMSGYKDWRNISVEVLTKKCTAVGDNLPFNYGIYTQAISSGIVQSRTFFSKFCYCLWWGLQNLSTLGQGLLTSTYPGEVIFSILIAISGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRLLPPDLREKVRRYDQYKWLETRGVDEESLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGVLKEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEDAAAAAAAYGTSRLGATILASRFAANALRGHRLRNVSGKSLINLQKPAEPDFSVYKGE 1121
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29194528 29206945 + CePI673135_10g014810.1 Cec10g1481 214396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1481 1121 Pfam Cyclic nucleotide-binding domain 918 1008 IPR000595 -
Cec10g1481 1121 ProSiteProfiles cAMP/cGMP binding motif profile. 897 1027 IPR000595 -
Cec10g1481 1121 SMART cnmp_10 897 1028 IPR000595 -
Cec10g1481 1121 CDD CAP_ED 897 1028 IPR000595 -
Cec10g1481 1121 Gene3D Jelly Rolls 895 1015 IPR014710 -
Cec10g1481 1121 Coils Coil 1045 1068 - -
Cec10g1481 1121 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 472 1098 - -
Cec10g1481 1121 Pfam Protein of unknown function (DUF760) 90 168 IPR008479 -
Cec10g1481 1121 Pfam Protein of unknown function (DUF760) 255 358 IPR008479 -
Cec10g1481 1121 Gene3D - 502 822 - -
Cec10g1481 1121 Coils Coil 222 242 - -
Cec10g1481 1121 Pfam Ion transport protein 499 824 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec10g1481 1121 SUPERFAMILY cAMP-binding domain-like 827 1017 IPR018490 -
Cec10g1481 1121 SUPERFAMILY Voltage-gated potassium channels 492 819 - -
Cec10g1481 1121 FunFam Cyclic nucleotide-gated ion channel 1 895 1013 - -
Cec10g1481 1121 ProSiteProfiles IQ motif profile. 1033 1062 - -
Cec10g1481 1121 Gene3D Helix hairpin bin 825 888 - -
Cec10g1481 1121 FunFam Cyclic nucleotide-gated ion channel 1 824 888 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0708 Cec-Chr2:7422835 Cec10g1481 Cec-Chr10:29194528 8.70E-41 dispersed
Cec02g1530 Cec-Chr2:32897767 Cec10g1481 Cec-Chr10:29194528 7.60E-304 dispersed
Cec05g0103 Cec-Chr5:919821 Cec10g1481 Cec-Chr10:29194528 9.30E-162 dispersed
Cec05g0105 Cec-Chr5:931543 Cec10g1481 Cec-Chr10:29194528 3.00E-62 dispersed
Cec05g1049 Cec-Chr5:9204755 Cec10g1481 Cec-Chr10:29194528 4.30E-112 dispersed
Cec05g1052 Cec-Chr5:9217459 Cec10g1481 Cec-Chr10:29194528 3.70E-119 dispersed
Cec06g1888 Cec-Chr6:32183045 Cec10g1481 Cec-Chr10:29194528 1.50E-181 dispersed
Cec10g1452 Cec-Chr10:28866671 Cec10g1481 Cec-Chr10:29194528 9.00E-185 dispersed
Cec10g1481 Cec-Chr10:29194528 Cec11g0480 Cec-Chr11:5168778 6.50E-105 dispersed
Cec10g1481 Cec-Chr10:29194528 Cec01g0049 Cec-Chr1:410925 4.80E-209 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1481 K05391 - csv:101221166 1365.13