Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1502 ATGAAAGAGCAGAAGAATCAAATCGATCGGCATCATCATCTTCCATCTGTTCTTGATAATCGAATTGCTGATTCTTCAACTCGGATCGCAAAAGAAGGCTTTCATATTCTCCGATTCCTTGGCCTTTCTCTTCCTTCGTCTTCAACTGGCCTTGTAAATTCTCTTTCACAGTTCTGCATCGTTAGGTTTCTCTCGGAGGAGGCGTTTGGTTTCTTGCCATTGCTCTCCCCTTCCCTTTCCCCACTCCAGATCTTCTTCTCTTTCATTTCCTTACCGTTTCAATCAAGTTTCCAGAGAATGTATGGTTTTGAAGCGCTTACCTTCAACATTCATGGAGGCTATTTGGAGGCCATCGTCCGTGGACATAGGGCTGGCTTGCTGACCGCCGCTGATTATAACAATTTGTGTCAGTGCGAAACCCTAGATGATATCAAGATGCACCTCTCTGCCACTGAGTATGGTCCTTATCTCCAAAACGAACCATCTCCATTACATACAACAACCATTGTGGAGAAATGCACCCTTAAACTGGTTGACGAGTATAAGCACATGTTGTGCCAAGCCACTGAGCCTCTGTCTACCTTCTTAGAGTATATCACATATGGTCACATGATAGACAATGTTGTCCTTATTGTTACTGGAACCTTGCATGAGAGAGATGTTCAGGAACTGTTGGAGAAGTGCCACCCTTTGGGCATGTTTGACAGCATTGCTACCTTGGCAGTTGCTCAGAATATGCGGGAACTTTATAGATTGGTGCTTGTTGACACCCCTTTGGCTCCATACTTTTCAGAGTGTATCACATCTGAGGATTTGGATGACATGAACATAGAAATTATGAGGAACACTCTCTATAAGGCATACCTAGAGGATTTCTACAGGTTCTGTCAGAAACTGGGTGGTGCCACTGCTGAGATCATGTCTGACCTCCTTGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATAAATAGTATTGGCACTGAGCTTACCCGAGATGATCGAAGGAAGTTGTATTCCAATTTTGGCTTGCTTTATCCCTATGGTCATGAGGAACTTGCAATCTGTGAGGATATTGATCAGGTTCGTGGTGCCATGGAAAAATACCCTCCCTACCAGTCAATTTTTTCCAAGCTATCATATGGTGAGAGCCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAAAGGCTATGCTTAGCATTTGAGCAACAGTTCCATTATGGTGTTTTCTTTGCATACATGAGGTTGAGGGAACAGGAGATTAGGAACCTAATGTGGATTTCGGAGTGTGTTGCTCAGAACCAGAAGTCGAGGCCGGCGAAACCAAACCAATCACCATCATCACCGTCGATGGACCGGAATCAGAACTTTCCGACCACCATAACCGACTTGGATGAAGATTCTCTCGCTCACTGCGCTTCATTCCTCAAGCGCCACGACATCTTCAATCTCGCCAGCACCTGCAAATATCTTCAACAAGTTGGAAATTCTGACTCCATTTGGCAACGCCTTTTGAGGGAGCGATGGCAGCATCAGTTACCACCTCTTGGTTCTTCCTTAGCTTCAGGAGGAGCTAGGAATGCCTACTTTGCTAGGCTTTCCGATTCGCGACAGTGCAAGTTTGAAGATCCTTTGGTTGCTAGTATCCTCACCCAACCCGAGCCTTATGGCCCCATGCTTTTGGATGGAGATAATATATTCGTTTCTCAGGGCTCCTCAATTCAAATGGTGACTATCACCAAAAATGTTAGCACTCTTGCCACTCTGAATGATCACAATGCGCGTATCACTTGTATGAGGTCGTTTCCCCTTTATGAAACTTCATTTCTTAGAAGTGAAGGACAAAGATCAGGAAATTTTTTGGTAACCTCAAGTTCTGATCACTCAATCCGTTTGTGGTGGAAGGGTTATTGTCAGAGTTTTCGAGGTCATAATGGCCCAGTTTCAATTCTGTCAGATAAACTGTTAGGTGATAGCAACGGCAAATTATTGGCCAGTGGAGGGGAAGATGGTACAGTTCGCCTTTGGTCTCTTAGTTCCGGTGCTTTAAAGGTTACACTACATGGACATGAAAAACCAATTAAATTAATGTCAGTTGCGGGGCATAAGACTTCTCTTTTGGTGAGCATTGCAAGAGACTCCAAGGTAAGAGTTTGGGATGTTACATCAACTATCCGTTCGTCTTGTTGCGTTGGATTAACTTCTCTTCCTGGTGGTCCTATAAACCTTAAGTGCCATGAATCATTGGTCTATGTTGCTACAACTTCCTCCGTTGTTGCAATCGATTTAAGGATTATGCAGAAAGTTCTTACGGCTGCAACTTATCAACCGTTTTTATATTCATTCGAGATGATTCCTTCTAAATCCTTACTATGCACAGGTGGTAGTGGCAGTGCAAAGCTTTGGGATATAAGAAGAAACCAGGATGATCTTAAACCTAAACCTATAGCTGGATTGGATGGACATAGTGGACCAGTGAGCTTCCTACACATGGATCCCTACAAAGTTGTTACGGGATGCCCAAACGATGTTTATGTCCACGTTTGGGAGGTCGATTCAGGCACACCAGCGAATTCTTTGAGTTGCTGGTTCGATGAATATACAGAGGGCAGCACAACATTGTCCTCTATGGCTGTTGACGGGTGTAGAATTGCCACTGCGTCTTATGCTGTGAAGTTGAAGCTATTTGGACTCCTTGAAAGGGTGATGTCTGAACACAGCAAGAAGCCAATCTTTGAGGTCTTGGGGGGACTCGAATGCCATTTGAAAGGAAGTTAA 2787 44.17 MKEQKNQIDRHHHLPSVLDNRIADSSTRIAKEGFHILRFLGLSLPSSSTGLVNSLSQFCIVRFLSEEAFGFLPLLSPSLSPLQIFFSFISLPFQSSFQRMYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRGAMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRPAKPNQSPSSPSMDRNQNFPTTITDLDEDSLAHCASFLKRHDIFNLASTCKYLQQVGNSDSIWQRLLRERWQHQLPPLGSSLASGGARNAYFARLSDSRQCKFEDPLVASILTQPEPYGPMLLDGDNIFVSQGSSIQMVTITKNVSTLATLNDHNARITCMRSFPLYETSFLRSEGQRSGNFLVTSSSDHSIRLWWKGYCQSFRGHNGPVSILSDKLLGDSNGKLLASGGEDGTVRLWSLSSGALKVTLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTSTIRSSCCVGLTSLPGGPINLKCHESLVYVATTSSVVAIDLRIMQKVLTAATYQPFLYSFEMIPSKSLLCTGGSGSAKLWDIRRNQDDLKPKPIAGLDGHSGPVSFLHMDPYKVVTGCPNDVYVHVWEVDSGTPANSLSCWFDEYTEGSTTLSSMAVDGCRIATASYAVKLKLFGLLERVMSEHSKKPIFEVLGGLECHLKGS 928
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29371269 29383404 - CePI673135_10g015020.1 Cec10g1502 214417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1502 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 690 726 IPR001680 GO:0005515(InterPro)
Cec10g1502 928 PRINTS G protein beta WD-40 repeat signature 624 638 IPR020472 -
Cec10g1502 928 PRINTS G protein beta WD-40 repeat signature 710 724 IPR020472 -
Cec10g1502 928 PRINTS G protein beta WD-40 repeat signature 667 681 IPR020472 -
Cec10g1502 928 SUPERFAMILY V-type ATP synthase subunit C 113 439 IPR036079 -
Cec10g1502 928 Gene3D ATP synthase (C/AC39) subunit, domain 3 113 434 IPR044911 -
Cec10g1502 928 Pfam WD domain, G-beta repeat 589 636 IPR001680 GO:0005515(InterPro)
Cec10g1502 928 Pfam WD domain, G-beta repeat 642 680 IPR001680 GO:0005515(InterPro)
Cec10g1502 928 Pfam WD domain, G-beta repeat 687 723 IPR001680 GO:0005515(InterPro)
Cec10g1502 928 FunFam V-type proton ATPase subunit 113 227 - -
Cec10g1502 928 Gene3D - 454 539 - -
Cec10g1502 928 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 100 441 IPR016727 GO:0007034(PANTHER)|GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cec10g1502 928 SMART WD40_4 769 806 IPR001680 GO:0005515(InterPro)
Cec10g1502 928 SMART WD40_4 815 853 IPR001680 GO:0005515(InterPro)
Cec10g1502 928 SMART WD40_4 683 723 IPR001680 GO:0005515(InterPro)
Cec10g1502 928 SMART WD40_4 638 680 IPR001680 GO:0005515(InterPro)
Cec10g1502 928 SMART WD40_4 585 637 IPR001680 GO:0005515(InterPro)
Cec10g1502 928 ProSiteProfiles F-box domain profile. 461 507 IPR001810 GO:0005515(InterPro)
Cec10g1502 928 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 690 726 - -
Cec10g1502 928 SUPERFAMILY WD40 repeat-like 587 892 IPR036322 GO:0005515(InterPro)
Cec10g1502 928 FunFam V-type proton ATPase subunit 305 408 - -
Cec10g1502 928 FunFam V-type proton ATPase subunit 190 304 - -
Cec10g1502 928 Pfam ATP synthase (C/AC39) subunit 115 440 IPR002843 GO:0046961(InterPro)
Cec10g1502 928 Gene3D - 190 298 IPR035067 -
Cec10g1502 928 SUPERFAMILY F-box domain 457 520 IPR036047 GO:0005515(InterPro)
Cec10g1502 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 663 689 IPR001680 GO:0005515(InterPro)
Cec10g1502 928 Gene3D - 781 918 IPR015943 GO:0005515(InterPro)
Cec10g1502 928 Gene3D - 305 408 IPR035067 -
Cec10g1502 928 ProSitePatterns Trp-Asp (WD) repeats signature. 710 724 IPR019775 -
Cec10g1502 928 Gene3D - 573 779 IPR015943 GO:0005515(InterPro)
Cec10g1502 928 MobiDBLite consensus disorder prediction 439 463 - -
Cec10g1502 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 620 636 IPR001680 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1502 Cec-Chr10:29371269 Cec11g1849 Cec-Chr11:32685092 5.70E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1502 K02146 - csv:101203260 697.967