Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g1502 | ATGAAAGAGCAGAAGAATCAAATCGATCGGCATCATCATCTTCCATCTGTTCTTGATAATCGAATTGCTGATTCTTCAACTCGGATCGCAAAAGAAGGCTTTCATATTCTCCGATTCCTTGGCCTTTCTCTTCCTTCGTCTTCAACTGGCCTTGTAAATTCTCTTTCACAGTTCTGCATCGTTAGGTTTCTCTCGGAGGAGGCGTTTGGTTTCTTGCCATTGCTCTCCCCTTCCCTTTCCCCACTCCAGATCTTCTTCTCTTTCATTTCCTTACCGTTTCAATCAAGTTTCCAGAGAATGTATGGTTTTGAAGCGCTTACCTTCAACATTCATGGAGGCTATTTGGAGGCCATCGTCCGTGGACATAGGGCTGGCTTGCTGACCGCCGCTGATTATAACAATTTGTGTCAGTGCGAAACCCTAGATGATATCAAGATGCACCTCTCTGCCACTGAGTATGGTCCTTATCTCCAAAACGAACCATCTCCATTACATACAACAACCATTGTGGAGAAATGCACCCTTAAACTGGTTGACGAGTATAAGCACATGTTGTGCCAAGCCACTGAGCCTCTGTCTACCTTCTTAGAGTATATCACATATGGTCACATGATAGACAATGTTGTCCTTATTGTTACTGGAACCTTGCATGAGAGAGATGTTCAGGAACTGTTGGAGAAGTGCCACCCTTTGGGCATGTTTGACAGCATTGCTACCTTGGCAGTTGCTCAGAATATGCGGGAACTTTATAGATTGGTGCTTGTTGACACCCCTTTGGCTCCATACTTTTCAGAGTGTATCACATCTGAGGATTTGGATGACATGAACATAGAAATTATGAGGAACACTCTCTATAAGGCATACCTAGAGGATTTCTACAGGTTCTGTCAGAAACTGGGTGGTGCCACTGCTGAGATCATGTCTGACCTCCTTGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATAAATAGTATTGGCACTGAGCTTACCCGAGATGATCGAAGGAAGTTGTATTCCAATTTTGGCTTGCTTTATCCCTATGGTCATGAGGAACTTGCAATCTGTGAGGATATTGATCAGGTTCGTGGTGCCATGGAAAAATACCCTCCCTACCAGTCAATTTTTTCCAAGCTATCATATGGTGAGAGCCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAAAGGCTATGCTTAGCATTTGAGCAACAGTTCCATTATGGTGTTTTCTTTGCATACATGAGGTTGAGGGAACAGGAGATTAGGAACCTAATGTGGATTTCGGAGTGTGTTGCTCAGAACCAGAAGTCGAGGCCGGCGAAACCAAACCAATCACCATCATCACCGTCGATGGACCGGAATCAGAACTTTCCGACCACCATAACCGACTTGGATGAAGATTCTCTCGCTCACTGCGCTTCATTCCTCAAGCGCCACGACATCTTCAATCTCGCCAGCACCTGCAAATATCTTCAACAAGTTGGAAATTCTGACTCCATTTGGCAACGCCTTTTGAGGGAGCGATGGCAGCATCAGTTACCACCTCTTGGTTCTTCCTTAGCTTCAGGAGGAGCTAGGAATGCCTACTTTGCTAGGCTTTCCGATTCGCGACAGTGCAAGTTTGAAGATCCTTTGGTTGCTAGTATCCTCACCCAACCCGAGCCTTATGGCCCCATGCTTTTGGATGGAGATAATATATTCGTTTCTCAGGGCTCCTCAATTCAAATGGTGACTATCACCAAAAATGTTAGCACTCTTGCCACTCTGAATGATCACAATGCGCGTATCACTTGTATGAGGTCGTTTCCCCTTTATGAAACTTCATTTCTTAGAAGTGAAGGACAAAGATCAGGAAATTTTTTGGTAACCTCAAGTTCTGATCACTCAATCCGTTTGTGGTGGAAGGGTTATTGTCAGAGTTTTCGAGGTCATAATGGCCCAGTTTCAATTCTGTCAGATAAACTGTTAGGTGATAGCAACGGCAAATTATTGGCCAGTGGAGGGGAAGATGGTACAGTTCGCCTTTGGTCTCTTAGTTCCGGTGCTTTAAAGGTTACACTACATGGACATGAAAAACCAATTAAATTAATGTCAGTTGCGGGGCATAAGACTTCTCTTTTGGTGAGCATTGCAAGAGACTCCAAGGTAAGAGTTTGGGATGTTACATCAACTATCCGTTCGTCTTGTTGCGTTGGATTAACTTCTCTTCCTGGTGGTCCTATAAACCTTAAGTGCCATGAATCATTGGTCTATGTTGCTACAACTTCCTCCGTTGTTGCAATCGATTTAAGGATTATGCAGAAAGTTCTTACGGCTGCAACTTATCAACCGTTTTTATATTCATTCGAGATGATTCCTTCTAAATCCTTACTATGCACAGGTGGTAGTGGCAGTGCAAAGCTTTGGGATATAAGAAGAAACCAGGATGATCTTAAACCTAAACCTATAGCTGGATTGGATGGACATAGTGGACCAGTGAGCTTCCTACACATGGATCCCTACAAAGTTGTTACGGGATGCCCAAACGATGTTTATGTCCACGTTTGGGAGGTCGATTCAGGCACACCAGCGAATTCTTTGAGTTGCTGGTTCGATGAATATACAGAGGGCAGCACAACATTGTCCTCTATGGCTGTTGACGGGTGTAGAATTGCCACTGCGTCTTATGCTGTGAAGTTGAAGCTATTTGGACTCCTTGAAAGGGTGATGTCTGAACACAGCAAGAAGCCAATCTTTGAGGTCTTGGGGGGACTCGAATGCCATTTGAAAGGAAGTTAA | 2787 | 44.17 | MKEQKNQIDRHHHLPSVLDNRIADSSTRIAKEGFHILRFLGLSLPSSSTGLVNSLSQFCIVRFLSEEAFGFLPLLSPSLSPLQIFFSFISLPFQSSFQRMYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRGAMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRPAKPNQSPSSPSMDRNQNFPTTITDLDEDSLAHCASFLKRHDIFNLASTCKYLQQVGNSDSIWQRLLRERWQHQLPPLGSSLASGGARNAYFARLSDSRQCKFEDPLVASILTQPEPYGPMLLDGDNIFVSQGSSIQMVTITKNVSTLATLNDHNARITCMRSFPLYETSFLRSEGQRSGNFLVTSSSDHSIRLWWKGYCQSFRGHNGPVSILSDKLLGDSNGKLLASGGEDGTVRLWSLSSGALKVTLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTSTIRSSCCVGLTSLPGGPINLKCHESLVYVATTSSVVAIDLRIMQKVLTAATYQPFLYSFEMIPSKSLLCTGGSGSAKLWDIRRNQDDLKPKPIAGLDGHSGPVSFLHMDPYKVVTGCPNDVYVHVWEVDSGTPANSLSCWFDEYTEGSTTLSSMAVDGCRIATASYAVKLKLFGLLERVMSEHSKKPIFEVLGGLECHLKGS | 928 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 29371269 | 29383404 | - | CePI673135_10g015020.1 | Cec10g1502 | 214417 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g1502 | 928 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 690 | 726 | IPR001680 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | PRINTS | G protein beta WD-40 repeat signature | 624 | 638 | IPR020472 | - | |
Cec10g1502 | 928 | PRINTS | G protein beta WD-40 repeat signature | 710 | 724 | IPR020472 | - | |
Cec10g1502 | 928 | PRINTS | G protein beta WD-40 repeat signature | 667 | 681 | IPR020472 | - | |
Cec10g1502 | 928 | SUPERFAMILY | V-type ATP synthase subunit C | 113 | 439 | IPR036079 | - | |
Cec10g1502 | 928 | Gene3D | ATP synthase (C/AC39) subunit, domain 3 | 113 | 434 | IPR044911 | - | |
Cec10g1502 | 928 | Pfam | WD domain, G-beta repeat | 589 | 636 | IPR001680 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | Pfam | WD domain, G-beta repeat | 642 | 680 | IPR001680 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | Pfam | WD domain, G-beta repeat | 687 | 723 | IPR001680 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | FunFam | V-type proton ATPase subunit | 113 | 227 | - | - | |
Cec10g1502 | 928 | Gene3D | - | 454 | 539 | - | - | |
Cec10g1502 | 928 | PANTHER | VACUOLAR ATP SYNTHASE SUBUNIT AC39 | 100 | 441 | IPR016727 | GO:0007034(PANTHER)|GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
Cec10g1502 | 928 | SMART | WD40_4 | 769 | 806 | IPR001680 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | SMART | WD40_4 | 815 | 853 | IPR001680 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | SMART | WD40_4 | 683 | 723 | IPR001680 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | SMART | WD40_4 | 638 | 680 | IPR001680 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | SMART | WD40_4 | 585 | 637 | IPR001680 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | ProSiteProfiles | F-box domain profile. | 461 | 507 | IPR001810 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 690 | 726 | - | - | |
Cec10g1502 | 928 | SUPERFAMILY | WD40 repeat-like | 587 | 892 | IPR036322 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | FunFam | V-type proton ATPase subunit | 305 | 408 | - | - | |
Cec10g1502 | 928 | FunFam | V-type proton ATPase subunit | 190 | 304 | - | - | |
Cec10g1502 | 928 | Pfam | ATP synthase (C/AC39) subunit | 115 | 440 | IPR002843 | GO:0046961(InterPro) | |
Cec10g1502 | 928 | Gene3D | - | 190 | 298 | IPR035067 | - | |
Cec10g1502 | 928 | SUPERFAMILY | F-box domain | 457 | 520 | IPR036047 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 663 | 689 | IPR001680 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | Gene3D | - | 781 | 918 | IPR015943 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | Gene3D | - | 305 | 408 | IPR035067 | - | |
Cec10g1502 | 928 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 710 | 724 | IPR019775 | - | |
Cec10g1502 | 928 | Gene3D | - | 573 | 779 | IPR015943 | GO:0005515(InterPro) | |
Cec10g1502 | 928 | MobiDBLite | consensus disorder prediction | 439 | 463 | - | - | |
Cec10g1502 | 928 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 620 | 636 | IPR001680 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec10g1502 | Cec-Chr10:29371269 | Cec11g1849 | Cec-Chr11:32685092 | 5.70E-06 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g1502 | K02146 | - | csv:101203260 | 697.967 |