Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1514 ATGGACTTGACTCCTGCAATTTCCACCGCCGCCGCCACCATTTCCACCGGTGGAGGAGCTGTGAAATCCCCTGAATTAGACACTGAAACCCCCATCAAAATCCAACCCACCACCAAATCTCACCCGTTCACTAACGGCGTCCTCAAGCGCCACCACCACACGGCGCCGCCGCCTCCGCAGGTGGTTTACAAAGAATGCCTCAAGAATCACGCCGCCAGTTTGGGCGGTCATGCTCTAGACGGCTGCGGCGAGTTCATGTCATCCCCCACCGCCACCGCCACCGATCCCACCTCCCTCAAATGCGCTGCTTGCGGTTGCCACCGGAATTTCCACCGCCGTGAACCGGAGGATCCAATCGCTACTCCGACGACAACCCATGTCATTGAGTACCAACCCCATCACCGCCACCACCCACCGCCGCCGCCTGCGGCGGCCCACCGGAGCCCGAGTTCCGCCTCCCCTCCTCCGATCTCCTCCTCGTACTACCCTTCAGCACCCCACATGCTTCTCGCCCTCTCCGGTGGTTTGCCGGAGAACGCCGGCAGCGGTGGTGGATTCCACCACTCGATTCTGACTCCGAGCCCCAATTCGAGAAAGCGATTCAGAACGAAATTCACTCAAAATCAGAAGGAGAAAATGTACGAATTTGCAGAGAAAGTGGGATGGAAGATTCAGAAACGAGACGAGGATATGATCCAAGAATTCTGTAGCGATGTCGGAGTTGACAGAGGCGTTCTCAAAGTTTGGATGCACAACAACAAGAACACTCTCGGGAAAAAAGACGGCGGCCGGAACATCAACGGCAGCGGTGGCGATGGGGATGGCGACGACAAAATTAACGGCGGTGGCGAGCCACACGCCACCGCAAATGGATCGTCTTCTTCCTCTTGA 891 57.35 MDLTPAISTAAATISTGGGAVKSPELDTETPIKIQPTTKSHPFTNGVLKRHHHTAPPPPQVVYKECLKNHAASLGGHALDGCGEFMSSPTATATDPTSLKCAACGCHRNFHRREPEDPIATPTTTHVIEYQPHHRHHPPPPPAAAHRSPSSASPPPISSSYYPSAPHMLLALSGGLPENAGSGGGFHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSDVGVDRGVLKVWMHNNKNTLGKKDGGRNINGSGGDGDGDDKINGGGEPHATANGSSSSS 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29555252 29556142 - CePI673135_10g015140.1 Cec10g1514 214429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1514 296 MobiDBLite consensus disorder prediction 131 159 - -
Cec10g1514 296 MobiDBLite consensus disorder prediction 254 296 - -
Cec10g1514 296 MobiDBLite consensus disorder prediction 16 59 - -
Cec10g1514 296 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 63 114 IPR006456 -
Cec10g1514 296 SUPERFAMILY Homeodomain-like 191 259 IPR009057 -
Cec10g1514 296 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 63 114 IPR006456 -
Cec10g1514 296 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 45 256 - GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER)
Cec10g1514 296 NCBIfam homeobox domain, ZF-HD class 198 255 IPR006455 -
Cec10g1514 296 FunFam Zinc-finger homeodomain protein 2 187 259 - -
Cec10g1514 296 Gene3D - 191 259 - -
Cec10g1514 296 Pfam ZF-HD protein dimerisation region 61 115 IPR006456 -
Cec10g1514 296 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1514 Cec-Chr10:29555252 Cec11g0010 Cec-Chr11:170889 4.20E-35 dispersed
Cec01g1578 Cec-Chr1:30379204 Cec10g1514 Cec-Chr10:29555252 4.40E-32 transposed
Cec10g1514 Cec-Chr10:29555252 Cec05g2662 Cec-Chr5:37235934 1.30E-44 wgd
Cec10g1514 Cec-Chr10:29555252 Cec06g1819 Cec-Chr6:31620399 1.20E-13 wgd
Cec10g1514 Cec-Chr10:29555252 Cec09g1936 Cec-Chr9:36246808 1.50E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30398 PF04770 ZF-HD_dimer 7.50E-29 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1514 - - - 0.0