Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1555 ATGGCAAAGCCTTCTACAAGAGAATGGACGAAGATTGACAAAGGAATGGCTTCTTTTTATTTCTTTCTTCATGTGCTTTGTATTTTTGCCCCATTTTATTTCCATTGGAGTGCATTTTGGGTTGCTTTTGCATTACACCACATTACAGGTCTTTTCGGCATTAGTGTTTCGTATCATAGAAATCTATCACATCGAAGTTTTAACCTTCCCAAATTCTTGGAATACTTGTTAGCTTATTGTGGAGTTCATGCGCTGCAGGGTGATCCAATCAGTTGGGTAAGTACACACAGGAGTCATCATCAGTTCGTTGATACTGAAAGGGATCCACACAGCCCTATTCAAGGATTCTTGTTTAGTTATATGACTTGGATGTTTGATTCAAATTCTTATGCTAAAAAAGTTTGTTCAGATAAGTGTTTGAATGATTTTGAAGAGATTGGTGAAAACAATTTTCTATGTGTGAGGAAGCATGGGAGAGCAGATAATGTTGGTGACTTGGAGAAGCAAACTTTCTATAGATTTATTCACAAAACCTATCTTCTTCATCCAATTATCCTTGCAATCCTACTTTTTCATGTTGGAGGAATTCCTTTTCTCATATGGGGAATGGGTGTGAGGATTGTCACGCTCCAACACTTAACATTTATGGTCAACTCAGCTCTTTACGGAATTGGGTGCCCTAGAAGAACTGTCTGCTCTTCCTGTTCATCTGAGGAGCTTTATCATCTATCATTCCTGGTAATCACTTCCTCTTCTTTTCATCGTTTTCTTACCTCTGCTTTGCTTGGATTTTGTAATGTGATTCAGAACTCAACGCCGAAATTAATCAAAACGGGGAAGGTGGATAACCTTGGTCTGCAACACCACCTGATCAATTATCTCTCGAAAAGCTTTTACATCCGGAACTTGGTATCCAAGCAAAGGAGGCGCATGCTTGTTGCTGGCTATGATCTTGACATGTCATACATCACTGATCATGTACTAGCAATGTCATTCCCTGCAGAACGTATGCGCGCAATGTATCGTAATCCCCTATGGCAGGTTAAGTCCGTACTGGACATGAGGCATCAAGGACATTACAAGATCTATAATCTCTGTATTGAAGAATCATATGATCCATCACATTTTCATGGGCGGGTGGAGTCATTTCCTTTCGATGATAATCATGTTCCACCTCTACAGATGATCAAAATCTTCTGTGAAAATGTCTCTTCATGGCTATCGTCCCACCCAAAGAATATTGCGGTTATACATTGCATGGCTGGAAAAGGTCGAACAGGATTGATGGTCTGTGCCTACTTGGTTTACTGTGGCATGTCAGCGGAGGATGCACTTCAGCTGTATGCTCAGAGGCGGACGACCAATAACGAAGGAGTATCAATTCCAAGCCAACGACGGTACGTGGGCTACTGGTCAAAGTGCCTTTCCTTTCCCAAGGGAGTTTATAATGGACCTCCTGAGGTGAAGTTGCCCGAACCATGTAGGAGAGAGTTGCAGAGAATTCGTCTTTATGACACAGTTAACACTGAATCAATTTTCTTTGTGGTCTCAGAATTGCAGGAGGTTCCTTCTCAACTATATCGTCCATCTATGGAACTTACCAGGAATTGTTGCAGACAATTTAAGAGAGGATATGAGAGGAGTAACAGTCCTCGTTATTTTCTATCTTTTGTTGAAGGCGAAAATGAAGGGAACAAGTCCGAAGTAGAGCCCCATCTTATTGTTCAAATGGATACCGAGTGTTCTGCACTATACCACAAAACCTGCCTTGACTACAATTTCGAGAAGCCTCTACCACTAACTGGAGATGTTCGCATCATATTCTACGCAAAGATGTTTGGAGGGCGTCTCTTCTATGCTTGCTTCAACACAGCCTTCATTAAAAACAGCTTGCTACAGCTAAGGTTGCAGGATTTGGACAAAGTTGGGAAAAAGGGAAGGTCACTTTGTGGTCCTTCCTTCTGCTTGGAGTTGTGTTTAAACCGACCTCTCCACTTCTTTGCTCCTCCATCGTCGCTCTCCCTCAATATCGCCGTCACCGCCGCCGCCGCCGCCGTGGAGCGCCTGCCAGATTTGAGAACCCAACAGGCGACATCTGAAGCTCTAGGAATGGACCCCAAGCACACAGGAGAGATTTTGAAGCATTTGGAGAAGCAGGATGAGTTTCTTATGGATGCTTATAGATCAATGTCCCATGAACTACATAAGCTTCAGGTAGAAGAAGAAATGCTCATGCACAAGTTTTATGAAATAATGTCAGCTCATGGTCTAACAAAGAAGAGTGAAGATGATCGTAATAGTTCTGGCAGCGTTAGGAATGGCGATAAAAACCTCTAA 2337 42.36 MAKPSTREWTKIDKGMASFYFFLHVLCIFAPFYFHWSAFWVAFALHHITGLFGISVSYHRNLSHRSFNLPKFLEYLLAYCGVHALQGDPISWVSTHRSHHQFVDTERDPHSPIQGFLFSYMTWMFDSNSYAKKVCSDKCLNDFEEIGENNFLCVRKHGRADNVGDLEKQTFYRFIHKTYLLHPIILAILLFHVGGIPFLIWGMGVRIVTLQHLTFMVNSALYGIGCPRRTVCSSCSSEELYHLSFLVITSSSFHRFLTSALLGFCNVIQNSTPKLIKTGKVDNLGLQHHLINYLSKSFYIRNLVSKQRRRMLVAGYDLDMSYITDHVLAMSFPAERMRAMYRNPLWQVKSVLDMRHQGHYKIYNLCIEESYDPSHFHGRVESFPFDDNHVPPLQMIKIFCENVSSWLSSHPKNIAVIHCMAGKGRTGLMVCAYLVYCGMSAEDALQLYAQRRTTNNEGVSIPSQRRYVGYWSKCLSFPKGVYNGPPEVKLPEPCRRELQRIRLYDTVNTESIFFVVSELQEVPSQLYRPSMELTRNCCRQFKRGYERSNSPRYFLSFVEGENEGNKSEVEPHLIVQMDTECSALYHKTCLDYNFEKPLPLTGDVRIIFYAKMFGGRLFYACFNTAFIKNSLLQLRLQDLDKVGKKGRSLCGPSFCLELCLNRPLHFFAPPSSLSLNIAVTAAAAAVERLPDLRTQQATSEALGMDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVEEEMLMHKFYEIMSAHGLTKKSEDDRNSSGSVRNGDKNL 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30012229 30029534 + CePI673135_10g015550.1 Cec10g1555 214470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1555 778 CDD Delta9-FADS-like 36 124 IPR015876 GO:0016717(InterPro)
Cec10g1555 778 Gene3D - 543 663 - -
Cec10g1555 778 MobiDBLite consensus disorder prediction 759 778 - -
Cec10g1555 778 ProSiteProfiles C2 tensin-type domain profile. 509 663 IPR014020 -
Cec10g1555 778 Gene3D Protein tyrosine phosphatase superfamily 296 477 IPR029021 -
Cec10g1555 778 ProSitePatterns Tyrosine specific protein phosphatases active site. 417 427 IPR016130 GO:0016311(InterPro)
Cec10g1555 778 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 317 475 IPR029021 -
Cec10g1555 778 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 298 662 IPR051281 GO:0004725(PANTHER)|GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)|GO:0046856(PANTHER)
Cec10g1555 778 CDD PTP_PTEN 319 473 IPR045101 GO:0016791(InterPro)
Cec10g1555 778 Pfam C2 domain of PTEN tumour-suppressor protein 582 660 IPR014020 -
Cec10g1555 778 PRINTS Fatty acid desaturase family 1 signature 59 79 IPR015876 GO:0016717(InterPro)
Cec10g1555 778 PRINTS Fatty acid desaturase family 1 signature 96 125 IPR015876 GO:0016717(InterPro)
Cec10g1555 778 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 560 661 IPR035892 -
Cec10g1555 778 ProSiteProfiles Phosphatase tensin-type domain profile. 309 478 IPR029023 -
Cec10g1555 778 SMART PTEN_C2_2 491 662 IPR014020 -
Cec10g1555 778 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 397 452 IPR000387 GO:0016311(InterPro)
Cec10g1555 778 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 296 478 - -
Cec10g1555 778 Pfam Polymorphic toxin system, DSP-PTPase phosphatase 381 438 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0662 Cec-Chr2:6767504 Cec10g1555 Cec-Chr10:30012229 6.00E-42 dispersed
Cec04g1397 Cec-Chr4:33598737 Cec10g1555 Cec-Chr10:30012229 2.00E-39 dispersed
Cec10g1555 Cec-Chr10:30012229 Cec11g0072 Cec-Chr11:874697 5.60E-63 dispersed
Cec10g1555 Cec-Chr10:30012229 Cec06g1320 Cec-Chr6:26531771 4.70E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1555 K01110 - csv:101212127 761.14