Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec10g1586 | ATGAATGAAGAGAAGGAAGGGCGCAAGGAAAAAATTCGAGTTGCTCTTTATGTTCAGAAGGCAGCATTACAGTTTATTGATGCCGTGAATCGGGATGAGTACCATCTGTCAGATGAGGCTAGGAGAGCTGGCTATAGTATTCATCCAGATGAGCTTGCATCCATAGTCCGTAGCCATGATTACAAGGCATTGAGATTCCATGGTGGTGTGGAAGGACTTTCAAGGAAAGTTTCTGTTGCACTAGACACAGGTGTCAGTGAAAAAGATACATCCAAGAGACAAGACATTTATGGTTACAATCGTTACACAGAGAAACCTTCCAGACCCTTTTGGGTGTACGTATGGGAAGCATTACACGACTTGACATTAATCATCCTAATATTTTGTGCACTAATTTCTTTAGGCGTTGGTATTGCCACAGAAGGGTGGCCGAAGGGAACATATGATGGTTTAGGAATTCTACTCAGTATATTATTGGTCGTCTTGGTTACTTCTATTAGTGATTACAAGCAGTCTTTGCAATTCAAGGATCTTGACAGGGAGAAGAAAAAAATTTATGTTGATGTCACTAGGGATGGGCTGAGGAAAAAAGTTTCCATTTATGACTTGGTTGTTGGAGATATTGTTCATCTATCCATTGGAGATCAGGTTCCCGCTGATGGGGTTTTCATATCAGGATATAGTCTACTAATTGATGAATCCAGCTTATCAGGTGAGAGTGAACCAGTGAACATAGATGAGGAGAAACCATTTCTTCTATCAGGAACCAAAGTGCAAGATGGATCTGGAAAGATGATGGTAACAACAGTTGGTATGAAAACTGAATGGGGAAAACTGATGGAAACTCTCAGTGAGGGAGGAGAAGACGAGACTCCACTGCAGGTGAAGCTGAATGGTGTAGCAACTCTTATTGGTAAAATTGGTTTGACTTTTGCTGTATTGACATTCCTGGTGATGACAGGAAGGTTTCTCGGAGAAAAAGCTGCTCACCATCAATTTACAAAGTGGACTTCAAGTGATGCACTAAAACTCTTAGATTTCTTTGCCGTTGCAGTTACCATAATAGTTGTCGCAGTTCCTGAAGGTTTACCACTGGCAGTGACATTAAGCCTTGCCTTTGCTATGAAGAAATTGATGGATGAAAGAGCACTAGTTAGGCATCTGTCTGCATGTGAAACAATGGGTTCGGTCAGTTGCATTTGCACAGATAAGACTGGGACATTAACCACAAACCATATGATAGTTAGCCGTGCATGGGTATGTGAAAATTTTATGGAGAATAAAGACCATGTGAGTGTAGACAAATTGAAATCAGAGATCTCTGAAGATGTTTTACGCATATTTTTGCAGTCCATATTTCAAAATACCAGCTGCGAAGTGACTAAAGATAAAGAGGGGAAGAACTCAATCGTTGGTGGAACACCAACGGAATCAGCACTATTGGAGTTTGGCATCCATTTGGGTGGGGATTTTCGTGCCCAACGTACAGAATATAAGATACTTAAGGTTGAGCCTTTCAATTCTGTTAGGAAGAAGATGTCTGTACTTGTAGCGCTTCCTAATGGTGGGGTCAGAGCTTTTGTCAAAGGTGCATCTGAAATAATACTAAGTATGTGTGACAAATATATTGATTCCAATGGAGAATCTATCTATTTAACAGAAGAGAAGGTAAATAATGCTACAAATGTTATCACTAGTTTTGCCAATGAAGCCTTGAGGACACTTTGCTTGGCCTTCAAAGATATAGAGGACTCCGGTGACAAATCAATTCCAGATGATGGATATACATTAATTGCAATTGTTGGGATCAAGGATCCTGTACGCCCAGGGGTCAAGGAAGCTGTTAAAACTTGTTTAGCAGCTGGAATAACTGTGCGTATGGTCACTGGTGACAATATTAATACAGCAAAGGCTATTGCTAAAGAATGTGGTATACTTACAGCCGATGGTTTAGCTATAGAAGGACCAAACTTCCGTAATTTATCTCCAGAACAGATGAAGCAAGTTATACCAAAACTGCAGGTGATGGCTCGGTCCTTGCCGCTGGACAAGTACACATTGGTTAACAATTTGCGGAGTATGGGTGAGGTTGTTGCAGTGACTGGAGATGGGACAAATGATGCTCCAGCTTTGCATGAGTCAGATATTGGACTAGCTATGGGCCTTGCCGGAACTGAGGTGGCCAAAGAAAATGCCGATGTGATCATAATGGATGACAATTTTTCAACTATTGTAAATGTTGCGAGATGGGGACGTGCGGTGTACATTAACATACAAAAGTTTGTGCAGTTTCAGCTAACAGTTAACATTGTTGCTCTAGTGATCAATTTCGTTTCTGCTTGCCTCTCAGGATCTGCTCCTCTTACGGCTGTACAGTTGCTTTGGGTGAACTTGATTATGGACACTCTTGGTGCTTTGGCACTGGCTACAGAGCCTCCAAATGATGGACTTATGCAGAGACCTCCAATTCCCAAGGGGGTTAACTTTATTACCAAAGCCATGTGGAGGAACATTATTGGTCAGAGTATCTATCAACTTGCTGTACTGGCAGTTCTTAATTTTGGGGGAAAGCAACTTCTTGGACTTAATGGATCTGATTCCACAAAAGTTCTCAACACTTTGATATTCAACTCATTTGTGTTCTGCCAGGTTTTCAACGAAATTAACAGCCGTGAGATCGAAAAGATCAACATCTTCCGAGGGATGTTCAGCAGCTGGATATTTTTGGGAGTAATGGTATCCACAGTGGGGTTTCAAATAATAATAATAGAACTTTTGGGTGCTTTTGCAAGCACTGTACCACTGAGCTGGGAACTATGGGGACTGAGTGTGTTGATTGGATTTGTGAGCATGCCAGTTGCAGTCGTGTTGAAGTTCATCCCTGTTCGTAAAGAAGTATTCACAGCCCAACATGATGGCTATGAACCAATCCCTTCTGGCCCAGAGCTGGCTTGA | 2955 | 41.62 | MNEEKEGRKEKIRVALYVQKAALQFIDAVNRDEYHLSDEARRAGYSIHPDELASIVRSHDYKALRFHGGVEGLSRKVSVALDTGVSEKDTSKRQDIYGYNRYTEKPSRPFWVYVWEALHDLTLIILIFCALISLGVGIATEGWPKGTYDGLGILLSILLVVLVTSISDYKQSLQFKDLDREKKKIYVDVTRDGLRKKVSIYDLVVGDIVHLSIGDQVPADGVFISGYSLLIDESSLSGESEPVNIDEEKPFLLSGTKVQDGSGKMMVTTVGMKTEWGKLMETLSEGGEDETPLQVKLNGVATLIGKIGLTFAVLTFLVMTGRFLGEKAAHHQFTKWTSSDALKLLDFFAVAVTIIVVAVPEGLPLAVTLSLAFAMKKLMDERALVRHLSACETMGSVSCICTDKTGTLTTNHMIVSRAWVCENFMENKDHVSVDKLKSEISEDVLRIFLQSIFQNTSCEVTKDKEGKNSIVGGTPTESALLEFGIHLGGDFRAQRTEYKILKVEPFNSVRKKMSVLVALPNGGVRAFVKGASEIILSMCDKYIDSNGESIYLTEEKVNNATNVITSFANEALRTLCLAFKDIEDSGDKSIPDDGYTLIAIVGIKDPVRPGVKEAVKTCLAAGITVRMVTGDNINTAKAIAKECGILTADGLAIEGPNFRNLSPEQMKQVIPKLQVMARSLPLDKYTLVNNLRSMGEVVAVTGDGTNDAPALHESDIGLAMGLAGTEVAKENADVIIMDDNFSTIVNVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACLSGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMQRPPIPKGVNFITKAMWRNIIGQSIYQLAVLAVLNFGGKQLLGLNGSDSTKVLNTLIFNSFVFCQVFNEINSREIEKINIFRGMFSSWIFLGVMVSTVGFQIIIIELLGAFASTVPLSWELWGLSVLIGFVSMPVAVVLKFIPVRKEVFTAQHDGYEPIPSGPELA | 984 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 30251384 | 30258936 | - | CePI673135_10g015860.1 | Cec10g1586 | 214501 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec10g1586 | 984 | Pfam | Cation transport ATPase (P-type) | 457 | 542 | - | - | |
| Cec10g1586 | 984 | CDD | P-type_ATPase_Ca_PMCA-like | 91 | 834 | - | - | |
| Cec10g1586 | 984 | Gene3D | - | 1 | 28 | - | - | |
| Cec10g1586 | 984 | SUPERFAMILY | Calcium ATPase, transduction domain A | 186 | 282 | IPR008250 | - | |
| Cec10g1586 | 984 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 407 | 611 | IPR023299 | GO:0000166(InterPro) | |
| Cec10g1586 | 984 | Gene3D | - | 116 | 960 | - | - | |
| Cec10g1586 | 984 | Gene3D | - | 398 | 746 | IPR023214 | - | |
| Cec10g1586 | 984 | FunFam | Calcium-transporting ATPase | 718 | 964 | - | - | |
| Cec10g1586 | 984 | NCBIfam | HAD-IC family P-type ATPase | 667 | 789 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec10g1586 | 984 | NCBIfam | HAD-IC family P-type ATPase | 153 | 431 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec10g1586 | 984 | NCBIfam | HAD-IC family P-type ATPase | 499 | 646 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec10g1586 | 984 | Pfam | Cation transporting ATPase, C-terminus | 786 | 960 | IPR006068 | - | |
| Cec10g1586 | 984 | FunFam | Calcium-transporting ATPase | 599 | 746 | - | - | |
| Cec10g1586 | 984 | PANTHER | CATION TRANSPORTING ATPASE | 38 | 962 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Cec10g1586 | 984 | Pfam | Cation transporter/ATPase, N-terminus | 67 | 133 | IPR004014 | - | |
| Cec10g1586 | 984 | SUPERFAMILY | HAD-like | 400 | 806 | IPR036412 | - | |
| Cec10g1586 | 984 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 67 | 963 | IPR023298 | - | |
| Cec10g1586 | 984 | Gene3D | - | 411 | 606 | IPR023299 | GO:0000166(InterPro) | |
| Cec10g1586 | 984 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 403 | 409 | IPR018303 | - | |
| Cec10g1586 | 984 | PRINTS | H+-transporting ATPase (proton pump) signature | 733 | 758 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec10g1586 | 984 | PRINTS | H+-transporting ATPase (proton pump) signature | 560 | 578 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec10g1586 | 984 | PRINTS | H+-transporting ATPase (proton pump) signature | 701 | 717 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec10g1586 | 984 | PRINTS | P-type cation-transporting ATPase superfamily signature | 232 | 246 | - | - | |
| Cec10g1586 | 984 | PRINTS | P-type cation-transporting ATPase superfamily signature | 401 | 415 | - | - | |
| Cec10g1586 | 984 | PRINTS | P-type cation-transporting ATPase superfamily signature | 701 | 720 | - | - | |
| Cec10g1586 | 984 | PRINTS | P-type cation-transporting ATPase superfamily signature | 725 | 737 | - | - | |
| Cec10g1586 | 984 | PRINTS | P-type cation-transporting ATPase superfamily signature | 599 | 610 | - | - | |
| Cec10g1586 | 984 | PRINTS | P-type cation-transporting ATPase superfamily signature | 621 | 631 | - | - | |
| Cec10g1586 | 984 | FunFam | Calcium-transporting ATPase | 411 | 606 | - | - | |
| Cec10g1586 | 984 | SFLD | p-type atpase | 383 | 753 | IPR044492 | - | |
| Cec10g1586 | 984 | Gene3D | - | 83 | 284 | - | - | |
| Cec10g1586 | 984 | SMART | Cation_ATPase_N_a_2 | 64 | 138 | IPR004014 | - | |
| Cec10g1586 | 984 | FunFam | Calcium-transporting ATPase | 163 | 284 | - | - | |
| Cec10g1586 | 984 | Pfam | haloacid dehalogenase-like hydrolase | 593 | 713 | - | - | |
| Cec10g1586 | 984 | SFLD | C1.7: P-type atpase like | 383 | 753 | - | - | |
| Cec10g1586 | 984 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 59 | 963 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Cec10g1586 | 984 | Pfam | E1-E2 ATPase | 184 | 379 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec01g0822 | Cec-Chr1:9146276 | Cec10g1586 | Cec-Chr10:30251384 | 0.00E+00 | dispersed | |
| Cec05g2279 | Cec-Chr5:34150703 | Cec10g1586 | Cec-Chr10:30251384 | 0.00E+00 | dispersed | |
| Cec09g0715 | Cec-Chr9:6449927 | Cec10g1586 | Cec-Chr10:30251384 | 1.20E-232 | dispersed | |
| Cec10g1586 | Cec-Chr10:30251384 | Cec11g1193 | Cec-Chr11:24541914 | 9.90E-259 | dispersed | |
| Cec10g1586 | Cec-Chr10:30251384 | Cec04g1453 | Cec-Chr4:34114404 | 0.00E+00 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec10g1586 | K01537 | - | csv:101206199 | 1778.07 |