Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1606 ATGTCCTTATTTTCTCAAACGGGAATTCGTCTGTCTACAAGACAGGGCGCCTCTCTCTCCGTTTCGAAAACTGGACATCCCGGTACACCGAACGACTCGCGACTCCTTAATTTCGGAAGGCGAAAAGGATCCGATTCTTCGTTTTGGATTACGCTTTCTCTTCTCGAGGAGCTAATGCGAACATCTGACAGAAATCAACACCGCAAACTGTTCCGCATATGGATAAAACAGTCTCCAGAATTCCATTTCCATGTTATTAACAAAAGCTCGAGAAGAATCCACGGCAACCCTCAGGAAGATTGCCAGAGTTTTCTTCGTTTAACTGAGTTTGAAGCTAAGTGCTATGTTCTTAAATCCAACAACCCCTGTAACACCCAAGGATACATAGATTATCTTTACATTTTCTATTGTCAGTATGGAAGTTTTAGCATCCTGGGCTACACTCTGTTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTTTGGGTAACACTGCTTCTGAATACTTTTGCTCTTCCCTTGAGAGCTTGTCAAAATTGTTGAATCTATCCCCAACAATTGCTGGTGTTACTCTGCTTTCTCTTGGCAATGGGGCACCTGATGTTTTTGCCAGCCTTGTTGCTTTCATGGGGGATGGAACTAGTGATATTGGCTTGAATACTGTTCTTGGCGGAGCCTCGTTTGTTACCTGCGTCGTCGTTGGAATCATTAGCATTTTGCTGCGTCGGCAATGGATTAAGGTGAATAGGTCTGCCTTCATTCGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTGTCTGTTTTCCTGATATTGCTTCATGGTCATATCAATCTGTGGGGTTCCATTGGCTTTTCTTCCATGTATATTATTTATGTTTTGGTTGTGTATGTCTCCCATGCCCAATGGTTGAGTTTTAGAAGTGAAATCTGTGAACCCCTTTTGAAAGAACCACCAAAGGATGAGTTTGAGGGTCGAAATGAACCACGAGACAACGGTGACGATGATGACAACAATGATGATGTTAGAATTGATGTATATGATCTCTGTTTTTGTCCAAGATTATCACCTTCTTGTCTTTTTTTCCTTCGGATTCTTGAGATTCCTCTTTACTTGCCTAGAAGATTGACAATTCCAGCCATTGCTGAAGAAAACTGGTCTAGACCATTTGCAGTTGCTTCAGTGACATTGGCCCCCCTTCTCTTATCTCTTCTATGGACATTTCACGACCAGAGTGATCAACCGTCGCAATCGAACCTTATCATCTGTGTCATCGCTTCGTTGCTTGGGGTTAGTTTTGGAATTGTTGCATTTGCGACGACTGAGAATTCAAGCCCACCAAAGAAGTACCTGTTCCCTTGGCTTGCAGCTGGCTTCACCATGAGTTTAACATGGAGTTACATTGTAGCTCAGGAACTGGTAGGCCTATTAGTTTCACTTGGCTACATAATGGGTATAAGCCCTTCAATCCTAGGACTTACCTTCCTTGCTTGGGGAAACTCTCTAGGGGATTTGGTTACCAATGTGACCATGGCTTTGAATGGCGGGCAGCGAGGCGCCCAAATCGCCATCTCCGGTTGCTACGCTGGCCCCATCTTCAACACTCTGTTCGGCCTTGGGATATCTCTTGTTGGCGCTTCATGGAAGAAGTATCCGCAGCCGGTCGCCATCCCTCCCGACCCTTATGTCATGGAGACATTGGGGCTGTTGGTAGGAGGGTTGCTTTGGGCACTTGTGGCTTTGCCAAGGAGAGAGATGAGGCTTGATGCTGTCTTGGGAGGAGGCCTTCTGGCTATCTATTTAACCTCTTTGCTCTTAAGGCTTTTGCAAGCTTTTGGTTCTTCCCATTAG 1845 44.77 MSLFSQTGIRLSTRQGASLSVSKTGHPGTPNDSRLLNFGRRKGSDSSFWITLSLLEELMRTSDRNQHRKLFRIWIKQSPEFHFHVINKSSRRIHGNPQEDCQSFLRLTEFEAKCYVLKSNNPCNTQGYIDYLYIFYCQYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFASLVAFMGDGTSDIGLNTVLGGASFVTCVVVGIISILLRRQWIKVNRSAFIRDVLFFLLVLLSVFLILLHGHINLWGSIGFSSMYIIYVLVVYVSHAQWLSFRSEICEPLLKEPPKDEFEGRNEPRDNGDDDDNNDDVRIDVYDLCFCPRLSPSCLFFLRILEIPLYLPRRLTIPAIAEENWSRPFAVASVTLAPLLLSLLWTFHDQSDQPSQSNLIICVIASLLGVSFGIVAFATTENSSPPKKYLFPWLAAGFTMSLTWSYIVAQELVGLLVSLGYIMGISPSILGLTFLAWGNSLGDLVTNVTMALNGGQRGAQIAISGCYAGPIFNTLFGLGISLVGASWKKYPQPVAIPPDPYVMETLGLLVGGLLWALVALPRREMRLDAVLGGGLLAIYLTSLLLRLLQAFGSSH 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30450863 30456734 - CePI673135_10g016060.1 Cec10g1606 214521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1606 614 Gene3D - 388 606 IPR044880 -
Cec10g1606 614 Gene3D - 182 308 IPR044880 -
Cec10g1606 614 MobiDBLite consensus disorder prediction 317 337 - -
Cec10g1606 614 Pfam Sodium/calcium exchanger protein 151 295 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec10g1606 614 Pfam Sodium/calcium exchanger protein 453 606 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec10g1606 614 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 88 612 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
Cec10g1606 614 MobiDBLite consensus disorder prediction 317 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1560 Cec-Chr3:33724153 Cec10g1606 Cec-Chr10:30450863 5.70E-103 dispersed
Cec03g1747 Cec-Chr3:35803226 Cec10g1606 Cec-Chr10:30450863 2.70E-48 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1606 K13754 - csv:101204766 910.212