Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec10g1646 | ATGAGGAAAGAGGGAGGGTTTACGAAGAAAATGGGAAAGTCGATATGGTTCAAAGTTTTGGTGATTTTTGTTGGTTTTGAGCTCATCGATGAGTTGGAAGCTGGGGAGTTGATAGCTGAAGTTTTGATAACAGTGAAGATTGGTGCAGACGATTTAAACAAAACGGTGAACGGGATGCCTAGCTTCGTTTCTTCGATGCCCACAGCAAATAATTCCATGGGTGCAGAGGGGAGCTCTATTCCTTCATCTCGGATTTCAGACTTTAGAACACTTGAGCAAACTCTTGGATTTCACATAGAAGATGTAGACCTTACTAGAAATCCTTTGTATAATCAGATAAAGTCCAGTAGTTCGACTCTGAACAACAACATCCAATTTGGTTCTTTAATTAAGCCACTTGCATCCACTGATGTAAATCTGCCAACTGCTGTCATGGGGTCTCGAACATTGCCATTACAGAAAGAGTCAAATCCAAACTTGGTTTCTACTTCTGGTGGTCCTCGTGAAAATTGGGGAGAGTCTAATATGGCAGATACCAGCACAAGAACTGATACCTCCACAGATGACACGGATGACAAAAGTCAAAGGCTTGACAAGGATCAAGGAAACTCACTTGCCGCATATGATTCTAGCAACAAATCAAAAGAAAAAACAGCAGATCAGAAGACCTTACGAAGGCTTGCTCAAAATCGCGAAGCTGCTAGAAAAAGCCGTTTAAGGAAAAAAGCATATGTGCAGCAGCTAGAAAGTAGCAGACTGAAGCTTACTCAACTTGAGCAAGAACTCCAGCGGGCCCGCCAGCAGGGTATATTTATTTCAAATTCTGGAGATCAAGCTCATTCAATGAGTGGGAATGGGGCCCTAGCATTCGACGTAGAATATTCACGTTGGTTAGAGGAGCATAACAGGCTAATGAATGAGCTTAGAGCTGCAGTAAATTCACATGCTGGTGACACTGAACTTCGTACTATTGTAGATAATGTGACTACACAGTTCGATGATATTTTCAGGTTGAAAGGCATTGCAGCCAAAGCTGATGTGTTCCACATCTTGTCAGGAATGTGGAAGACACCAGCAGAGCGGTGTTTCCTGTGGATTGGTGGCTTCCGTTCATCTGAGATCCTAAAGCTTCTTGTAAACCAATTAGAGCCTTTGGCTGAGCAGCAGCTAATGGGCATTTGCAACCTGCAACAATTATCACAACAGGCAGAAGATGCTCTCTCACAAGGAATGGATGCATTGCAGCAATCCTTGGCTGAAACATTGGCCAGTGCCACACCTGCAACGTCGGGATCGTCTGGGAATGTGGCAAATTATATGGGTCAAATGGCCATGGCAATGGGAAAGCTTGGAACTCTTGAAGGCTTCCTACGACAGGCTGATAATCTTCGTCAACAAACCCTTCAACAAATGCATCGCATATTGACAACCCGTCAATCAGCCCGTGCACTTCTTGCAATAAACGACTACTTCTCCCGTCTTAGAGCCCTCAGTTCTCTGTGGCTTGCACGGCCACGAGATTGA | 1524 | 44.23 | MRKEGGFTKKMGKSIWFKVLVIFVGFELIDELEAGELIAEVLITVKIGADDLNKTVNGMPSFVSSMPTANNSMGAEGSSIPSSRISDFRTLEQTLGFHIEDVDLTRNPLYNQIKSSSSTLNNNIQFGSLIKPLASTDVNLPTAVMGSRTLPLQKESNPNLVSTSGGPRENWGESNMADTSTRTDTSTDDTDDKSQRLDKDQGNSLAAYDSSNKSKEKTADQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISNSGDQAHSMSGNGALAFDVEYSRWLEEHNRLMNELRAAVNSHAGDTELRTIVDNVTTQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFLWIGGFRSSEILKLLVNQLEPLAEQQLMGICNLQQLSQQAEDALSQGMDALQQSLAETLASATPATSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRD | 507 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 30977939 | 30986401 | + | CePI673135_10g016460.1 | Cec10g1646 | 214561 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec10g1646 | 507 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 180 | 507 | - | - | |
Cec10g1646 | 507 | CDD | bZIP_HBP1b-like | 222 | 273 | - | - | |
Cec10g1646 | 507 | MobiDBLite | consensus disorder prediction | 149 | 183 | - | - | |
Cec10g1646 | 507 | Pfam | Seed dormancy control | 305 | 379 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cec10g1646 | 507 | Coils | Coil | 241 | 268 | - | - | |
Cec10g1646 | 507 | Pfam | bZIP transcription factor | 221 | 262 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g1646 | 507 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 220 | 264 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g1646 | 507 | MobiDBLite | consensus disorder prediction | 184 | 199 | - | - | |
Cec10g1646 | 507 | ProSiteProfiles | DOG1 domain profile. | 287 | 504 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cec10g1646 | 507 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 225 | 240 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g1646 | 507 | SUPERFAMILY | Leucine zipper domain | 222 | 265 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g1646 | 507 | Gene3D | - | 221 | 273 | - | - | |
Cec10g1646 | 507 | FunFam | BZIP family transcription factor | 221 | 270 | - | - | |
Cec10g1646 | 507 | SMART | brlzneu | 218 | 281 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec10g1646 | 507 | MobiDBLite | consensus disorder prediction | 149 | 223 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g1100 | Cec-Chr8:22827086 | Cec10g1646 | Cec-Chr10:30977939 | 9.20E-132 | dispersed | |
Cec10g1646 | Cec-Chr10:30977939 | Cec10g1751 | Cec-Chr10:32194494 | 1.20E-87 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30409 | PF14144 | DOG1 | 9.30E-30 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec10g1646 | K14431 | - | csv:101219149 | 850.892 |