Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1656 ATGGGTTTGGAAATTGTGGATCCAAACACTTGCATCAGGGGCTGCTGCTCCAGCAAATCGATTCCTCTTCATCTTCAACCTTCCGCATTTACGTTGCTCTCCCCAATTGCCCGAGGGGCCGAGAGTATTGTGTATGAAGGAAGGTTGGATGGTAAAAAAGTTGCTGTAAAGAAGCCCACCTTGTCCACTTCTGAGGAATTGGACAAGTTTCATATGGAGCTCCAGTTGCTATGTGTATTAGATCATCCAGGCATAGTAAAACTGGTTGCAGCAAATGCGAAGCCACCTAACTACATGTTTTTCTTTGAATTCTACGAGTTTCCAAATCTTGCGGAGAAATTGCATGCCGAAGAATGGAATCCAAGTATCAATCAGGTGCTCATGATCACTATAGAGTTAGCAAAGGCTTTGCAGTATTTGCATAACTTGGGGATTGTTCATAGGGATGTGAAACCAGCAAATGTTCTTCTTGACAAAGATTTGCATCCGCACTTGGCTGATTTTGGTCTAGCAACACATCGGAAATATCTGAAAGAAATTTCTGCTGAAAATTGGAAGTCATCTGGCAAGCCAACAGGTGGTTTCTATAAGAAAAACATGGTTGGGACACTCATTTATATGGCCCCCGAGATATTGAGGAAGGAAATACATACAGACCTATCAGACGTCTATAGTTTTGGCATCCTAATGAATGAGCTTTTGACTGGTGTTGTTCCATATACAGATCTTCGTACTGAAGCACAGGCCCACACTGTATTGGAAATGAATTATACAGAGCAGCTGCTTACGGCAGCTATTGTTTCAGATGGCTTGCGGCCAGCTCTTCCTACTGATGAGTCTGGCACACCATCTAGGTTGTTATCACTTATACGGAGGTGCTGGGATGCAAATCCAAGAAATAGACCGTCTTTTTCTGATGTAGTTATGGACTTAGAATCAATTTGGGAGAATAGAGAGGGTCTAGAATCTGTCACCCCTATACAACCTGACTTGTGTGGTAGGCTTAGTGATGCTAATGAACATGATTACGTGTATCGAGAAGATATTAACTGGTCAAATCAGGGAGAACATTGTTCTCAAAAATCATCTGATGCAGATAGGTGTGCTTTGAATGAGTGGTTTGATTTCTCAACTGACCATTCAGCATACCGCCCAACACTTTCTTACGGATCCTTCTCCACCTGTGGGAGGAGGGAGACCATGGAGGACTCTCATTTCCTTTTGCGTCACTTCTGCAGTGAAGAGGACATCCATGTCTTTGGGATCTTTGATGGTCATAGAGGTGCAGCAGCTGCTGAGTTTTCAGCTCAAGCAATTCCTGGATTCTTGCGAACATCATTTTCCACAAGAAGTCCTGCAGATGCATTAACGGAAGCATTTGTAAAAACAGACATTGAGTTTAGAAAAGAACTCGAGTTCTTTCGCAAATCCAAGAAAGTTAAACAGAAAGATTGGCATCCTGGTTGCACTGCTGTTGTTGCTCTAGTTGTTAGAGACAGGCTTTTTGTTGCCAATGCTGGTGATTGCAGGACAATATTGTGTCGGGCTGGGAATCCCATTGTTTTAAGTAAGGATCATGTCGCTAGTTGTCTTGAGGAGAGAGAGCGTGTCATCAGTGCTGGAGGACAGGTCAAGTGGCAAGTTGATACATGGAGGGTTGGACCGGCTGCTCTTCAGGTCACTCGATCAATTGGCGACGATGATCTGAAGCCAGCCGTCACTGCGGAACCTGAGATAACGGAAACTGTTTTGACATCACAGGATGATTACCTGGTTATGGCTAGTGATGGATTGTGGGATGTCCTTAGCAACTCTGAGGTAGTTGGTATAATCAGGGACACTGTCAAAGATCCGGGAATGTGCTCGAAGCGACTTGCAACAGAAGCGGCAGCTCGGGGAAGCAACGATAACATCACGGTAATTGTTGTATTTTTACATCCAGTATCTACAGTAGAGAGAATATATTAA 1968 43.85 MGLEIVDPNTCIRGCCSSKSIPLHLQPSAFTLLSPIARGAESIVYEGRLDGKKVAVKKPTLSTSEELDKFHMELQLLCVLDHPGIVKLVAANAKPPNYMFFFEFYEFPNLAEKLHAEEWNPSINQVLMITIELAKALQYLHNLGIVHRDVKPANVLLDKDLHPHLADFGLATHRKYLKEISAENWKSSGKPTGGFYKKNMVGTLIYMAPEILRKEIHTDLSDVYSFGILMNELLTGVVPYTDLRTEAQAHTVLEMNYTEQLLTAAIVSDGLRPALPTDESGTPSRLLSLIRRCWDANPRNRPSFSDVVMDLESIWENREGLESVTPIQPDLCGRLSDANEHDYVYREDINWSNQGEHCSQKSSDADRCALNEWFDFSTDHSAYRPTLSYGSFSTCGRRETMEDSHFLLRHFCSEEDIHVFGIFDGHRGAAAAEFSAQAIPGFLRTSFSTRSPADALTEAFVKTDIEFRKELEFFRKSKKVKQKDWHPGCTAVVALVVRDRLFVANAGDCRTILCRAGNPIVLSKDHVASCLEERERVISAGGQVKWQVDTWRVGPAALQVTRSIGDDDLKPAVTAEPEITETVLTSQDDYLVMASDGLWDVLSNSEVVGIIRDTVKDPGMCSKRLATEAAARGSNDNITVIVVFLHPVSTVERIY 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31038629 31050000 - CePI673135_10g016560.1 Cec10g1656 214571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1656 655 SUPERFAMILY PP2C-like 380 647 IPR036457 -
Cec10g1656 655 Gene3D - 379 650 IPR036457 -
Cec10g1656 655 SMART PP2C_4 378 643 IPR001932 -
Cec10g1656 655 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1656 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec10g1656 655 SUPERFAMILY Protein kinase-like (PK-like) 24 331 IPR011009 -
Cec10g1656 655 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 379 649 - -
Cec10g1656 655 Gene3D Transferase(Phosphotransferase) domain 1 17 328 - -
Cec10g1656 655 ProSiteProfiles PPM-type phosphatase domain profile. 388 645 IPR001932 -
Cec10g1656 655 Pfam Protein phosphatase 2C 389 638 IPR001932 -
Cec10g1656 655 PANTHER PROTEIN PHOSPHATASE 358 644 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec10g1656 655 Pfam Protein kinase domain 33 308 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1656 655 SMART PP2C_SIG_2 403 645 IPR001932 -
Cec10g1656 655 SMART serkin_6 30 314 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec10g1656 655 CDD PP2Cc 388 645 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1656 Cec-Chr10:31038629 Cec11g1164 Cec-Chr11:23849824 2.30E-30 dispersed
Cec10g1656 Cec-Chr10:31038629 Cec09g0479 Cec-Chr9:4063707 4.00E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72333 PF00069 Pkinase 6.50E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1656 - - - 0.0