Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec10g1660 ATGGGATTCTTAGAATGTCTTGGCCATTTCTTTCAAAATGCAAATCCTTACATCGCAGTCATCTCCCTCCAATTCGGCTATGCCGGAATGAATATCATCTCCACCGTCTCCCTCAACCGGGGTATGAGCCACTACGTCCTCGTTGTCTACCGCCATGCCTTTGCCACCGCCGTCATGGCACCCTTTGCTCTTGTTCTCGAGAGGAAAGTAAGACCCAAGATTACATTTAAGATTTTCATTCAGATGTTTGTTCTTGCTCTACTTGGGCCACTGATTGATCAAAACTTCTACTATGTGGGGCTGAAAATGACATCCCCAACTTTCTCTTGTGCCATAAGCAACATGCTTCCTTCAATGACATTTGTCATGGCAGTCATTTGCAGGATGGAGAAGTTGGATTTGAAAAGAGTGAGATGCCAAGCAAAGTTGTTTGGAACAGTAATGACGGTAGTGGGAGCCATGTTGATGACATTTTACAAAGGAAGTGTCATCAACTTCTTCTGGACCGGGCACGGCCACCAACCGCACGCACCACCTACTGCAGATGCGGCAGCACTCAACCACCACAACGACGGAGAGTTCATCAAAGGCTCAATCTTGCTCATCATCGCCACTCTGGCTTGGGCAGCCTTCTTCATTCTCCAAGTCATAACTTTGAGAAAATACACCGCTCATCTTTCTCTCACCACTTTGGTTTGCTTTTTGGGAACCCTTCAGGCCATTGTTGTCACCCTTGCTATGGAGCACCACCCCTCTGCCTGGGCTATCGGCTGGGACTTGAACCTTCTTGCCGCCGCATATGCAGGGATTGTGACTTCAGGGGTGGCATATTATGTTCAAGGTTTGGTTATGAAGACAAAGGGGCCAGTTTTTGTAACAGCTTTTAGCCCTTTGATGATGGTGATTGTTGCTTTCATGGGATCTCTCATCTTGGCTGAAAAGATTTATGCTGGAGGGATAATTGGAGCAGTGTTGATTGTGATAGGGTTGTACTCTGTTTTGTGGGGAAAGTACAAAGAAAGCAAAGAGAAAGAAGTTGAAGAGATTGTTGAATTAGCAATGAAAGGTGGAGATCAATTGCCTGTAATAAATGAAGGCATTGAAACAATTCAAAAGAAAGAGGGTTTGGCCATTACTATTCCACCCCAAGCTCATGGAGAAGAGGCTTCAAGACACTAA 1179 45.55 MGFLECLGHFFQNANPYIAVISLQFGYAGMNIISTVSLNRGMSHYVLVVYRHAFATAVMAPFALVLERKVRPKITFKIFIQMFVLALLGPLIDQNFYYVGLKMTSPTFSCAISNMLPSMTFVMAVICRMEKLDLKRVRCQAKLFGTVMTVVGAMLMTFYKGSVINFFWTGHGHQPHAPPTADAAALNHHNDGEFIKGSILLIIATLAWAAFFILQVITLRKYTAHLSLTTLVCFLGTLQAIVVTLAMEHHPSAWAIGWDLNLLAAAYAGIVTSGVAYYVQGLVMKTKGPVFVTAFSPLMMVIVAFMGSLILAEKIYAGGIIGAVLIVIGLYSVLWGKYKESKEKEVEEIVELAMKGGDQLPVINEGIETIQKKEGLAITIPPQAHGEEASRH 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31079733 31081982 - CePI673135_10g016600.1 Cec10g1660 214575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec10g1660 392 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020(InterPro)
Cec10g1660 392 Pfam EamA-like transporter family 20 157 IPR000620 GO:0016020(InterPro)
Cec10g1660 392 PANTHER WAT1-RELATED PROTEIN 18 346 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec10g1660 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
Cec10g1660 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0647 Cec-Chr4:25239175 Cec10g1660 Cec-Chr10:31079733 2.70E-123 dispersed
Cec06g1164 Cec-Chr6:23082986 Cec10g1660 Cec-Chr10:31079733 1.40E-59 dispersed
Cec08g0581 Cec-Chr8:17235107 Cec10g1660 Cec-Chr10:31079733 3.70E-92 dispersed
Cec08g0728 Cec-Chr8:19001705 Cec10g1660 Cec-Chr10:31079733 7.00E-61 dispersed
Cec08g1510 Cec-Chr8:26841942 Cec10g1660 Cec-Chr10:31079733 2.40E-62 dispersed
Cec09g2114 Cec-Chr9:38119484 Cec10g1660 Cec-Chr10:31079733 1.00E-64 dispersed
Cec09g2115 Cec-Chr9:38146668 Cec10g1660 Cec-Chr10:31079733 2.10E-84 dispersed
Cec10g1660 Cec-Chr10:31079733 Cec11g1365 Cec-Chr11:27912721 3.70E-124 dispersed
Cec10g1660 Cec-Chr10:31079733 Cec11g1619 Cec-Chr11:30471817 2.50E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec10g1660 - - - 0.0